Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS20410

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
5,034,011	-				-2.5
5,034,180	-		ABI39_RS20405	0.24	-1.7
5,034,180	-		ABI39_RS20405	0.24	-1.0
5,034,180	-		ABI39_RS20405	0.24	-2.2
5,034,521	+		ABI39_RS20405	0.56	-1.8
5,034,521	+		ABI39_RS20405	0.56	-1.9
5,034,522	-		ABI39_RS20405	0.56	-0.9
5,034,588	-		ABI39_RS20405	0.62	-3.5
5,034,697	+		ABI39_RS20405	0.72	-0.0
5,034,940	-				-1.3
5,034,970	+				-1.6
5,034,970	+				-3.4
5,034,970	+				+2.3
5,034,974	+				-1.8
5,034,974	+				-1.6
5,034,975	-				-2.1
5,035,021	+				-2.0
5,035,358	+		ABI39_RS20410	0.33	-1.3
5,035,445	+		ABI39_RS20410	0.41	-2.3
5,035,445	+		ABI39_RS20410	0.41	-2.6
5,035,477	-		ABI39_RS20410	0.44	-0.7
5,035,670	+		ABI39_RS20410	0.62	-0.4
5,035,730	+		ABI39_RS20410	0.68	-2.5
5,035,817	-		ABI39_RS20410	0.76	-2.1
5,035,833	+		ABI39_RS20410	0.77	-3.1
5,035,863	-		ABI39_RS20410	0.80	-1.3
5,036,051	+				-1.9
5,036,132	+				-2.5
5,036,132	+				-2.7
5,036,136	+				-2.8
5,036,137	-				-0.2
5,036,220	+				+0.3
5,036,235	+				-1.0
5,036,238	-				+0.1