Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS15415

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
3,990,602	+		ABI39_RS15410	0.39	-4.5
3,990,603	-		ABI39_RS15410	0.39	-2.8
3,990,614	-		ABI39_RS15410	0.40	-2.1
3,990,614	-		ABI39_RS15410	0.40	-3.4
3,990,734	+		ABI39_RS15410	0.53	-2.4
3,990,735	-		ABI39_RS15410	0.53	-3.5
3,990,737	-		ABI39_RS15410	0.53	-1.7
3,990,737	-		ABI39_RS15410	0.53	-3.6
3,990,849	+		ABI39_RS15410	0.64	-3.7
3,990,852	-		ABI39_RS15410	0.65	-3.3
3,990,852	-		ABI39_RS15410	0.65	-3.3
3,990,853	+		ABI39_RS15410	0.65	-4.5
3,990,854	-		ABI39_RS15410	0.65	-3.3
3,990,900	+		ABI39_RS15410	0.70	-3.5
3,990,929	+		ABI39_RS15410	0.73	-0.8
3,991,212	-				-2.2
3,991,295	+		ABI39_RS15415	0.26	-3.3
3,991,362	-		ABI39_RS15415	0.46	-1.3
3,991,365	-		ABI39_RS15415	0.47	-2.3
3,991,377	-		ABI39_RS15415	0.51	-3.3
3,991,461	+		ABI39_RS15415	0.77	-4.2
3,991,472	+		ABI39_RS15415	0.80	-2.3
3,991,473	-		ABI39_RS15415	0.81	-4.4
3,991,475	-		ABI39_RS15415	0.81	-2.8
3,991,505	+				-3.9
3,991,532	-				+1.0
3,991,534	-				-1.9
3,991,616	+				+0.9
3,991,710	+		ABI39_RS15420	0.14	+0.2
3,991,710	+		ABI39_RS15420	0.14	-0.4
3,991,713	-		ABI39_RS15420	0.14	+0.2
3,991,811	-		ABI39_RS15420	0.27	+1.0
3,991,942	-		ABI39_RS15420	0.44	-0.9
3,992,089	-		ABI39_RS15420	0.64	+0.1
3,992,272	+		ABI39_RS15420	0.88	+1.1
3,992,343	-				-0.6
3,992,434	+				+1.2
3,992,485	+				-2.6
3,992,485	+				-1.6
3,992,486	-				-3.1
3,992,488	-				-1.0
3,992,488	-				-2.4
3,992,488	-				-1.3
3,992,489	+				-1.4
3,992,489	+				-2.1
3,992,490	-				-1.5
3,992,500	-				-1.2
3,992,500	-				-1.4