Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS12675

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
3,320,936	+		ABI39_RS12665	0.86	-4.2
3,320,940	+		ABI39_RS12665	0.87	-3.6
3,321,048	-				-6.1
3,321,052	+				-5.0
3,321,068	+				-0.6
3,321,089	+				-0.6
3,321,219	-		ABI39_RS12670	0.22	+0.2
3,321,248	-		ABI39_RS12670	0.26	+0.4
3,321,261	+		ABI39_RS12670	0.28	+0.4
3,321,261	+		ABI39_RS12670	0.28	-1.2
3,321,262	-		ABI39_RS12670	0.28	-0.6
3,321,262	-		ABI39_RS12670	0.28	+2.4
3,321,262	-		ABI39_RS12670	0.28	-0.7
3,321,262	-		ABI39_RS12670	0.28	-2.6
3,321,264	-		ABI39_RS12670	0.28	+2.2
3,321,264	-		ABI39_RS12670	0.28	-1.0
3,321,312	-		ABI39_RS12670	0.35	+0.8
3,321,460	+		ABI39_RS12670	0.55	-1.6
3,321,605	+		ABI39_RS12670	0.74	-0.6
3,321,606	-		ABI39_RS12670	0.75	-1.5
3,321,856	-				+0.7
3,322,156	-		ABI39_RS12675	0.28	-4.8
3,322,621	+		ABI39_RS12675	0.77	-1.0
3,322,711	+		ABI39_RS12675	0.87	-1.0
3,322,712	-		ABI39_RS12675	0.87	-5.1
3,322,731	-		ABI39_RS12675	0.89	-5.1
3,322,756	-				-5.3
3,322,756	-				-4.3
3,322,757	+				-0.6
3,322,851	-				-0.6
3,322,979	-		ABI39_RS12680	0.12	-0.6
3,323,081	-		ABI39_RS12680	0.22	+0.4
3,323,515	+		ABI39_RS12680	0.66	-1.5
3,323,577	+		ABI39_RS12680	0.72	-1.8
3,323,578	-		ABI39_RS12680	0.72	+1.2
3,323,627	-		ABI39_RS12680	0.77	+0.7
3,323,627	-		ABI39_RS12680	0.77	-0.1
3,323,684	-		ABI39_RS12680	0.82	-0.6