Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS10210

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
2,723,373	+		ABI39_RS10200	0.71	-4.0
2,723,521	+		ABI39_RS10200	0.81	-4.6
2,723,655	-				-4.9
2,723,667	-				-5.0
2,723,749	+				-3.7
2,723,752	+				-5.3
2,723,808	+				-3.3
2,723,814	-				-2.8
2,723,975	+		ABI39_RS10205	0.31	-5.3
2,723,992	+		ABI39_RS10205	0.34	-6.4
2,723,993	-		ABI39_RS10205	0.34	-5.1
2,724,118	-		ABI39_RS10205	0.55	-5.6
2,724,258	+		ABI39_RS10205	0.78	-3.5
2,724,359	+				-1.3
2,724,359	+				-1.8
2,724,386	-				-5.1
2,724,493	+				-4.8
2,724,494	-				-4.0
2,724,790	+		ABI39_RS10210	0.28	-2.0
2,724,790	+		ABI39_RS10210	0.28	-4.9
2,724,884	+		ABI39_RS10210	0.34	-4.8
2,724,885	-		ABI39_RS10210	0.34	-6.0
2,724,901	+		ABI39_RS10210	0.35	-2.6
2,724,929	-		ABI39_RS10210	0.37	-3.7
2,725,019	-		ABI39_RS10210	0.43	-4.0
2,725,059	-		ABI39_RS10210	0.45	-4.5
2,725,194	+		ABI39_RS10210	0.54	-4.8
2,725,373	+		ABI39_RS10210	0.66	-5.9
2,725,374	-		ABI39_RS10210	0.66	-4.8
2,725,428	-		ABI39_RS10210	0.69	-5.2
2,725,494	+		ABI39_RS10210	0.73	-5.7
2,725,497	-		ABI39_RS10210	0.74	-4.4
2,725,497	-		ABI39_RS10210	0.74	-5.0
2,725,555	-		ABI39_RS10210	0.77	-3.3
2,725,716	-		ABI39_RS10210	0.88	-5.9
2,725,772	-				-4.8
2,725,815	-				-3.8
2,725,900	-				-3.4
2,726,116	+		ABI39_RS10215	0.10	-5.5
2,726,156	+		ABI39_RS10215	0.14	-5.6
2,726,193	+		ABI39_RS10215	0.18	-3.2
2,726,193	+		ABI39_RS10215	0.18	-5.7
2,726,340	+		ABI39_RS10215	0.32	-6.0
2,726,476	-		ABI39_RS10215	0.44	-5.1
2,726,529	+		ABI39_RS10215	0.49	-3.7
2,726,530	-		ABI39_RS10215	0.49	-4.6
2,726,530	-		ABI39_RS10215	0.49	-5.2
2,726,551	-		ABI39_RS10215	0.51	-5.3
2,726,555	+		ABI39_RS10215	0.52	-6.3
2,726,555	+		ABI39_RS10215	0.52	-5.7
2,726,647	+		ABI39_RS10215	0.60	-6.3
2,726,648	-		ABI39_RS10215	0.61	-5.0