Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS09575

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
2,579,671	-		ABI39_RS09565	0.63	-0.0
2,579,674	+		ABI39_RS09565	0.64	+1.2
2,579,675	-		ABI39_RS09565	0.64	+0.4
2,579,768	-		ABI39_RS09565	0.75	+0.2
2,579,810	+		ABI39_RS09565	0.80	+1.6
2,579,889	-		ABI39_RS09565	0.89	+1.3
2,579,955	+				+0.3
2,579,956	-				+1.3
2,579,975	-				+0.5
2,579,987	+				-0.1
2,580,045	-				-1.7
2,580,064	+				-0.9
2,580,455	-				+0.8
2,580,471	-				+0.2
2,580,501	-				-3.5
2,580,514	-				-1.7
2,580,698	-		ABI39_RS09575	0.19	-2.1
2,580,853	-		ABI39_RS09575	0.31	-1.3
2,581,163	-		ABI39_RS09575	0.57	-1.7
2,581,186	+		ABI39_RS09575	0.59	-0.3
2,581,223	+		ABI39_RS09575	0.62	-1.3
2,581,224	-		ABI39_RS09575	0.62	-0.3
2,581,291	+		ABI39_RS09575	0.67	-1.7
2,581,347	-		ABI39_RS09575	0.72	-0.7
2,581,541	+		ABI39_RS09575	0.88	-2.6
2,581,659	+				-1.3
2,581,661	+				-1.6
2,581,696	+				-1.6
2,581,696	+				-0.7
2,581,746	-				+0.9
2,581,754	-				+1.0
2,581,754	-				-0.3
2,581,793	-				-0.4
2,581,843	+				+0.2
2,581,844	-				-0.6
2,581,860	+				+0.7
2,581,882	+				-0.1
2,581,903	-				+0.9
2,581,944	-				-0.4
2,581,954	-				+0.4
2,581,954	-				+0.3
2,582,102	+		ABI39_RS09580	0.24	-2.7
2,582,301	+		ABI39_RS09580	0.42	-1.1
2,582,313	+		ABI39_RS09580	0.44	-1.1
2,582,319	-		ABI39_RS09580	0.44	+0.5
2,582,344	+		ABI39_RS09580	0.47	-3.1
2,582,402	-		ABI39_RS09580	0.52	+0.2
2,582,402	-		ABI39_RS09580	0.52	+1.2
2,582,473	+		ABI39_RS09580	0.59	+0.8
2,582,474	-		ABI39_RS09580	0.59	+1.4
2,582,493	+		ABI39_RS09580	0.61	+0.8
2,582,677	-		ABI39_RS09580	0.78	-0.1