Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS06985 and ABI39_RS06990 are separated by 4 nucleotides ABI39_RS06990 and ABI39_RS06995 are separated by 152 nucleotides
ABI39_RS06985: ABI39_RS06985 - YifB family Mg chelatase-like AAA ATPase, at 1,933,205 to 1,934,743
_RS06985
ABI39_RS06990: ABI39_RS06990 - DUF4369 domain-containing protein, at 1,934,748 to 1,935,815
_RS06990
ABI39_RS06995: ABI39_RS06995 - tetratricopeptide repeat protein, at 1,935,968 to 1,937,644
_RS06995
Position (kb) 1934
1935
1936 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 1933.760 kb on + strand, within ABI39_RS06985 at 1933.760 kb on + strand, within ABI39_RS06985 at 1933.762 kb on + strand, within ABI39_RS06985 at 1933.763 kb on - strand, within ABI39_RS06985 at 1933.763 kb on - strand, within ABI39_RS06985 at 1933.763 kb on - strand, within ABI39_RS06985 at 1933.765 kb on - strand, within ABI39_RS06985 at 1933.800 kb on - strand, within ABI39_RS06985 at 1934.045 kb on - strand, within ABI39_RS06985 at 1934.336 kb on + strand, within ABI39_RS06985 at 1934.376 kb on - strand, within ABI39_RS06985 at 1934.434 kb on + strand, within ABI39_RS06985 at 1934.434 kb on + strand, within ABI39_RS06985 at 1934.524 kb on + strand, within ABI39_RS06985 at 1934.586 kb on - strand, within ABI39_RS06985 at 1934.893 kb on - strand, within ABI39_RS06990 at 1934.895 kb on - strand, within ABI39_RS06990 at 1934.895 kb on - strand, within ABI39_RS06990 at 1934.898 kb on + strand, within ABI39_RS06990 at 1934.898 kb on + strand, within ABI39_RS06990 at 1934.899 kb on - strand, within ABI39_RS06990 at 1935.091 kb on - strand, within ABI39_RS06990 at 1935.276 kb on - strand, within ABI39_RS06990 at 1935.324 kb on + strand, within ABI39_RS06990 at 1935.325 kb on - strand, within ABI39_RS06990 at 1935.361 kb on + strand, within ABI39_RS06990 at 1935.386 kb on + strand, within ABI39_RS06990 at 1935.386 kb on + strand, within ABI39_RS06990 at 1935.407 kb on + strand, within ABI39_RS06990 at 1935.453 kb on + strand, within ABI39_RS06990 at 1935.595 kb on - strand, within ABI39_RS06990 at 1935.669 kb on + strand, within ABI39_RS06990 at 1935.699 kb on + strand, within ABI39_RS06990 at 1935.702 kb on + strand, within ABI39_RS06990 at 1935.704 kb on + strand, within ABI39_RS06990 at 1935.704 kb on + strand, within ABI39_RS06990 at 1935.705 kb on - strand, within ABI39_RS06990 at 1935.705 kb on - strand, within ABI39_RS06990 at 1935.750 kb on - strand at 1935.922 kb on - strand at 1935.957 kb on - strand at 1935.960 kb on + strand at 1935.964 kb on + strand at 1936.170 kb on + strand, within ABI39_RS06995 at 1936.246 kb on - strand, within ABI39_RS06995 at 1936.294 kb on + strand, within ABI39_RS06995 at 1936.317 kb on + strand, within ABI39_RS06995 at 1936.420 kb on - strand, within ABI39_RS06995 at 1936.474 kb on + strand, within ABI39_RS06995 at 1936.563 kb on + strand, within ABI39_RS06995 at 1936.674 kb on - strand, within ABI39_RS06995 at 1936.709 kb on + strand, within ABI39_RS06995
Per-strain Table
Position Strand Gene LocusTag Fraction Starch soluble; autoclaved 2.5 mg/ml (C) remove 1,933,760 + ABI39_RS06985 0.36 -0.2 1,933,760 + ABI39_RS06985 0.36 -0.3 1,933,762 + ABI39_RS06985 0.36 -0.3 1,933,763 - ABI39_RS06985 0.36 -0.0 1,933,763 - ABI39_RS06985 0.36 -1.6 1,933,763 - ABI39_RS06985 0.36 -1.0 1,933,765 - ABI39_RS06985 0.36 +0.1 1,933,800 - ABI39_RS06985 0.39 +0.4 1,934,045 - ABI39_RS06985 0.55 +0.3 1,934,336 + ABI39_RS06985 0.73 -0.9 1,934,376 - ABI39_RS06985 0.76 +1.4 1,934,434 + ABI39_RS06985 0.80 -0.5 1,934,434 + ABI39_RS06985 0.80 -0.9 1,934,524 + ABI39_RS06985 0.86 -1.0 1,934,586 - ABI39_RS06985 0.90 -0.2 1,934,893 - ABI39_RS06990 0.14 -2.0 1,934,895 - ABI39_RS06990 0.14 -1.8 1,934,895 - ABI39_RS06990 0.14 -2.6 1,934,898 + ABI39_RS06990 0.14 -1.4 1,934,898 + ABI39_RS06990 0.14 -1.0 1,934,899 - ABI39_RS06990 0.14 -1.1 1,935,091 - ABI39_RS06990 0.32 -1.8 1,935,276 - ABI39_RS06990 0.49 -2.0 1,935,324 + ABI39_RS06990 0.54 -3.0 1,935,325 - ABI39_RS06990 0.54 -1.5 1,935,361 + ABI39_RS06990 0.57 -3.5 1,935,386 + ABI39_RS06990 0.60 -3.2 1,935,386 + ABI39_RS06990 0.60 -0.9 1,935,407 + ABI39_RS06990 0.62 -2.9 1,935,453 + ABI39_RS06990 0.66 -1.7 1,935,595 - ABI39_RS06990 0.79 -1.7 1,935,669 + ABI39_RS06990 0.86 -2.3 1,935,699 + ABI39_RS06990 0.89 -2.9 1,935,702 + ABI39_RS06990 0.89 -1.9 1,935,704 + ABI39_RS06990 0.90 -2.2 1,935,704 + ABI39_RS06990 0.90 -2.4 1,935,705 - ABI39_RS06990 0.90 -1.1 1,935,705 - ABI39_RS06990 0.90 -1.2 1,935,750 - -1.7 1,935,922 - -1.5 1,935,957 - -0.7 1,935,960 + -0.9 1,935,964 + -0.5 1,936,170 + ABI39_RS06995 0.12 -4.2 1,936,246 - ABI39_RS06995 0.17 -1.1 1,936,294 + ABI39_RS06995 0.19 -2.5 1,936,317 + ABI39_RS06995 0.21 -2.6 1,936,420 - ABI39_RS06995 0.27 -3.0 1,936,474 + ABI39_RS06995 0.30 -1.9 1,936,563 + ABI39_RS06995 0.35 -4.3 1,936,674 - ABI39_RS06995 0.42 -2.7 1,936,709 + ABI39_RS06995 0.44 -1.4
Or see this region's nucleotide sequence