Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS06475

Experiment: Starch soluble; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Starch soluble; autoclaved 2.5 mg/ml (C)
1,797,465	-				+0.2
1,797,534	-		ABI39_RS06470	0.15	-0.6
1,797,601	-		ABI39_RS06470	0.23	+0.7
1,797,665	+		ABI39_RS06470	0.30	-1.0
1,797,666	-		ABI39_RS06470	0.31	-1.4
1,797,749	+		ABI39_RS06470	0.40	+0.0
1,797,770	+		ABI39_RS06470	0.43	+0.1
1,797,771	-		ABI39_RS06470	0.43	-0.2
1,797,848	+		ABI39_RS06470	0.52	-0.2
1,797,876	+		ABI39_RS06470	0.55	-0.3
1,797,919	-		ABI39_RS06470	0.60	+0.1
1,798,148	+		ABI39_RS06470	0.87	-0.5
1,798,152	-		ABI39_RS06470	0.87	+0.7
1,798,195	+				-0.1
1,798,195	+				+0.4
1,798,196	-				+0.3
1,798,203	-				-1.1
1,798,227	+				+0.4
1,798,230	-				+1.5
1,798,303	-				+0.7
1,798,322	+				+0.9
1,798,375	-				+1.2
1,798,532	-		ABI39_RS06475	0.17	+0.1
1,798,874	+		ABI39_RS06475	0.53	-0.1
1,798,947	-		ABI39_RS06475	0.60	+0.3
1,798,947	-		ABI39_RS06475	0.60	+0.3
1,798,950	+		ABI39_RS06475	0.60	-0.6
1,798,950	+		ABI39_RS06475	0.60	+0.5
1,798,950	+		ABI39_RS06475	0.60	+0.2
1,798,951	-		ABI39_RS06475	0.61	+0.6
1,798,963	-		ABI39_RS06475	0.62	+0.2
1,798,963	-		ABI39_RS06475	0.62	+1.0
1,798,971	-		ABI39_RS06475	0.63	-0.1
1,799,147	-		ABI39_RS06475	0.81	+1.4
1,799,147	-		ABI39_RS06475	0.81	+0.3
1,799,175	-		ABI39_RS06475	0.84	+0.1
1,799,236	+				+1.1
1,799,293	+				-1.1
1,799,294	-				+1.8
1,799,311	+				+0.2
1,799,313	+				+0.6
1,799,314	-				+0.5
1,799,314	-				-2.2
1,799,326	+				-0.8
1,799,326	+				+0.2
1,799,327	-				+0.5
1,799,327	-				+0.7
1,799,327	-				+1.1
1,799,396	+				-0.5
1,799,396	+				+0.4
1,799,519	+		ABI39_RS06480	0.16	+0.4
1,799,670	+		ABI39_RS06480	0.29	+0.4
1,799,671	-		ABI39_RS06480	0.29	+1.5
1,799,671	-		ABI39_RS06480	0.29	+0.6
1,799,675	+		ABI39_RS06480	0.29	-2.5
1,800,025	+		ABI39_RS06480	0.58	-0.4
1,800,025	+		ABI39_RS06480	0.58	-0.5