Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS22255

Experiment: (+)-Arabinogalactan; autoclaved 5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	(+)-Arabinogalactan; autoclaved 5 mg/ml (C)
4,073,401	+		ABI39_RS15815	0.61	+0.0
4,073,401	+		ABI39_RS15815	0.61	+0.2
4,073,408	-		ABI39_RS15815	0.61	+0.2
4,073,411	+		ABI39_RS15815	0.61	+0.2
4,073,412	-		ABI39_RS15815	0.61	-0.7
4,073,482	+		ABI39_RS15815	0.64	+0.5
4,073,641	+		ABI39_RS15815	0.71	-0.0
4,073,641	+		ABI39_RS15815	0.71	+0.3
4,073,776	+		ABI39_RS15815	0.76	+0.5
4,073,815	+		ABI39_RS15815	0.77	+0.6
4,073,816	-		ABI39_RS15815	0.77	+1.0
4,073,847	+		ABI39_RS15815	0.79	+0.9
4,073,886	+		ABI39_RS15815	0.80	+0.5
4,073,928	+		ABI39_RS15815	0.82	-0.0
4,073,962	+		ABI39_RS15815	0.83	+0.3
4,073,962	+		ABI39_RS15815	0.83	+0.7
4,073,962	+		ABI39_RS15815	0.83	-0.1
4,073,964	+		ABI39_RS15815	0.83	-1.0
4,073,964	+		ABI39_RS15815	0.83	+0.2
4,073,965	-		ABI39_RS15815	0.83	-1.3
4,073,965	-		ABI39_RS15815	0.83	+1.0
4,073,966	+		ABI39_RS15815	0.83	-0.1
4,073,966	+		ABI39_RS15815	0.83	-0.7
4,073,966	+		ABI39_RS15815	0.83	-0.8
4,073,967	-		ABI39_RS15815	0.83	-0.0
4,074,026	-		ABI39_RS15815	0.86	+0.7
4,074,240	-				-1.1
4,074,274	+				+0.1
4,074,275	-				-0.1
4,074,283	-				+0.2
4,074,320	+				-0.3
4,074,320	+				+0.6
4,074,388	+				-0.5
4,074,389	-				-0.1
4,074,439	-		ABI39_RS22255	0.19	+1.0
4,074,495	+		ABI39_RS22255	0.36	-0.4
4,074,593	-		ABI39_RS22255	0.67	+0.8
4,074,611	+		ABI39_RS22255	0.73	-0.2
4,074,804	+		ABI39_RS15820	0.40	+1.5
4,074,869	+		ABI39_RS15820	0.68	+0.2
4,074,933	+				-0.8
4,075,058	-				+0.4
4,075,118	-				+0.4
4,075,158	+				+0.1
4,075,208	+		ABI39_RS15825	0.14	-0.1
4,075,369	-		ABI39_RS15825	0.38	+0.1
4,075,403	+		ABI39_RS15825	0.43	-0.3
4,075,422	+		ABI39_RS15825	0.46	-0.3
4,075,517	-		ABI39_RS15825	0.60	+0.2
4,075,544	-		ABI39_RS15825	0.63	+1.2
4,075,571	+		ABI39_RS15825	0.67	+0.1
4,075,588	+		ABI39_RS15825	0.70	+1.0
4,075,594	+		ABI39_RS15825	0.71	-0.1
4,075,647	-		ABI39_RS15825	0.79	+0.7
4,075,663	-		ABI39_RS15825	0.81	+0.8
4,075,665	-		ABI39_RS15825	0.81	-0.1