Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS13115

Experiment: (+)-Arabinogalactan; autoclaved 5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	(+)-Arabinogalactan; autoclaved 5 mg/ml (C)
3,420,832	+		ABI39_RS13110	0.32	+0.2
3,420,834	+		ABI39_RS13110	0.32	-1.0
3,420,839	+		ABI39_RS13110	0.33	+0.4
3,420,905	+		ABI39_RS13110	0.38	-0.3
3,420,906	-		ABI39_RS13110	0.38	-0.8
3,420,923	+		ABI39_RS13110	0.40	+0.9
3,420,968	+		ABI39_RS13110	0.43	+0.6
3,420,968	+		ABI39_RS13110	0.43	+0.5
3,421,006	+		ABI39_RS13110	0.47	-0.2
3,421,007	-		ABI39_RS13110	0.47	+0.7
3,421,047	+		ABI39_RS13110	0.50	+0.1
3,421,104	+		ABI39_RS13110	0.55	+0.6
3,421,130	-		ABI39_RS13110	0.57	+0.4
3,421,137	-		ABI39_RS13110	0.57	+0.1
3,421,203	-		ABI39_RS13110	0.63	-0.6
3,421,218	-		ABI39_RS13110	0.64	+0.9
3,421,218	-		ABI39_RS13110	0.64	+0.4
3,421,223	+		ABI39_RS13110	0.64	+0.0
3,421,223	+		ABI39_RS13110	0.64	-0.2
3,421,224	-		ABI39_RS13110	0.65	-0.8
3,421,270	-		ABI39_RS13110	0.68	+1.1
3,421,433	+		ABI39_RS13110	0.82	+0.0
3,421,469	-		ABI39_RS13110	0.85	-0.3
3,421,470	+		ABI39_RS13110	0.85	-0.4
3,421,470	+		ABI39_RS13110	0.85	-0.5
3,421,470	+		ABI39_RS13110	0.85	-0.3
3,421,480	+		ABI39_RS13110	0.86	-0.2
3,421,496	-		ABI39_RS13110	0.87	+0.4
3,421,583	+				+0.7
3,421,627	-				+0.5
3,421,926	+				-0.6
3,422,627	-				+0.5
3,422,632	-				-0.4
3,422,653	-				-0.3