Experiment: K25
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt clsB and ybhN overlap by 1 nucleotides ybhN and ybhL are separated by 35 nucleotides ybhL and NOLOHH_22700 are separated by 69 nucleotides NOLOHH_22700 and NOLOHH_22705 overlap by 53 nucleotides NOLOHH_22705 and ybhL are separated by 77 nucleotides
NOLOHH_22685: clsB - cardiolipin synthase ClsB, at 4,480,455 to 4,481,696
clsB
NOLOHH_22690: ybhN - Inner membrane protein YbhN, at 4,481,696 to 4,482,652
ybhN
NOLOHH_22695: ybhL - Inhibitor of apoptosis-promoting Bax1, at 4,482,688 to 4,483,401
ybhL
NOLOHH_22700: NOLOHH_22700 - Integral membrane protein, at 4,483,471 to 4,483,845
_22700
NOLOHH_22705: NOLOHH_22705 - hypothetical protein, at 4,483,793 to 4,484,242
_22705
NOLOHH_22710: ybhL - Inner membrane protein YbhL, at 4,484,320 to 4,485,024
ybhL
Position (kb) 4482
4483
4484 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4481.879 kb on + strand, within ybhN at 4481.880 kb on - strand, within ybhN at 4481.897 kb on + strand, within ybhN at 4481.898 kb on - strand, within ybhN at 4481.966 kb on - strand, within ybhN at 4482.016 kb on + strand, within ybhN at 4482.043 kb on - strand, within ybhN at 4482.061 kb on + strand, within ybhN at 4482.109 kb on + strand, within ybhN at 4482.110 kb on - strand, within ybhN at 4482.181 kb on + strand, within ybhN at 4482.208 kb on - strand, within ybhN at 4482.262 kb on + strand, within ybhN at 4482.262 kb on + strand, within ybhN at 4482.349 kb on - strand, within ybhN at 4482.373 kb on - strand, within ybhN at 4482.392 kb on + strand, within ybhN at 4482.392 kb on + strand, within ybhN at 4482.393 kb on - strand, within ybhN at 4482.424 kb on + strand, within ybhN at 4482.428 kb on - strand, within ybhN at 4482.509 kb on - strand, within ybhN at 4482.509 kb on - strand, within ybhN at 4482.560 kb on + strand at 4482.662 kb on - strand at 4482.690 kb on - strand at 4482.730 kb on - strand at 4482.890 kb on - strand, within ybhL at 4483.025 kb on - strand, within ybhL at 4483.107 kb on + strand, within ybhL at 4483.232 kb on + strand, within ybhL at 4483.855 kb on + strand, within NOLOHH_22705 at 4483.869 kb on + strand, within NOLOHH_22705 at 4483.916 kb on + strand, within NOLOHH_22705 at 4483.936 kb on + strand, within NOLOHH_22705 at 4483.979 kb on - strand, within NOLOHH_22705 at 4484.053 kb on + strand, within NOLOHH_22705 at 4484.155 kb on - strand, within NOLOHH_22705 at 4484.198 kb on + strand at 4484.202 kb on + strand at 4484.211 kb on + strand at 4484.211 kb on + strand at 4484.211 kb on + strand at 4484.211 kb on + strand at 4484.211 kb on + strand at 4484.211 kb on + strand at 4484.212 kb on - strand at 4484.379 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction K25 remove 4,481,879 + ybhN NOLOHH_22690 0.19 +0.0 4,481,880 - ybhN NOLOHH_22690 0.19 +1.2 4,481,897 + ybhN NOLOHH_22690 0.21 +1.1 4,481,898 - ybhN NOLOHH_22690 0.21 -1.0 4,481,966 - ybhN NOLOHH_22690 0.28 +0.2 4,482,016 + ybhN NOLOHH_22690 0.33 -0.6 4,482,043 - ybhN NOLOHH_22690 0.36 -0.2 4,482,061 + ybhN NOLOHH_22690 0.38 +0.3 4,482,109 + ybhN NOLOHH_22690 0.43 +0.3 4,482,110 - ybhN NOLOHH_22690 0.43 +0.7 4,482,181 + ybhN NOLOHH_22690 0.51 -0.4 4,482,208 - ybhN NOLOHH_22690 0.54 +1.0 4,482,262 + ybhN NOLOHH_22690 0.59 -0.3 4,482,262 + ybhN NOLOHH_22690 0.59 +1.0 4,482,349 - ybhN NOLOHH_22690 0.68 -1.9 4,482,373 - ybhN NOLOHH_22690 0.71 -0.1 4,482,392 + ybhN NOLOHH_22690 0.73 -0.2 4,482,392 + ybhN NOLOHH_22690 0.73 +0.1 4,482,393 - ybhN NOLOHH_22690 0.73 -0.9 4,482,424 + ybhN NOLOHH_22690 0.76 -0.4 4,482,428 - ybhN NOLOHH_22690 0.76 +0.1 4,482,509 - ybhN NOLOHH_22690 0.85 +1.0 4,482,509 - ybhN NOLOHH_22690 0.85 -1.9 4,482,560 + +0.3 4,482,662 - +0.6 4,482,690 - +1.3 4,482,730 - +0.6 4,482,890 - ybhL NOLOHH_22695 0.28 -1.3 4,483,025 - ybhL NOLOHH_22695 0.47 -1.5 4,483,107 + ybhL NOLOHH_22695 0.59 -1.0 4,483,232 + ybhL NOLOHH_22695 0.76 -0.7 4,483,855 + NOLOHH_22705 0.14 +1.0 4,483,869 + NOLOHH_22705 0.17 +1.4 4,483,916 + NOLOHH_22705 0.27 +0.0 4,483,936 + NOLOHH_22705 0.32 +0.5 4,483,979 - NOLOHH_22705 0.41 -0.2 4,484,053 + NOLOHH_22705 0.58 +0.7 4,484,155 - NOLOHH_22705 0.80 +0.5 4,484,198 + -0.9 4,484,202 + -0.7 4,484,211 + -0.0 4,484,211 + -0.0 4,484,211 + -1.1 4,484,211 + -0.6 4,484,211 + +0.3 4,484,211 + -0.2 4,484,212 - +2.1 4,484,379 - -0.4
Or see this region's nucleotide sequence