Experiment: K25
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yhcC and arcB are separated by 95 nucleotides arcB and elbB are separated by 229 nucleotides elbB and mtgA overlap by 4 nucleotides
NOLOHH_09690: yhcC - TIGR01212 family radical SAM protein, at 1,871,482 to 1,872,411
yhcC
NOLOHH_09695: arcB - aerobic respiration two-component sensor histidine kinase ArcB, at 1,872,507 to 1,874,843
arcB
NOLOHH_09705: elbB - isoprenoid biosynthesis glyoxalase ElbB, at 1,875,073 to 1,875,726
elbB
NOLOHH_09710: mtgA - monofunctional biosynthetic peptidoglycan transglycosylase, at 1,875,723 to 1,876,451
mtgA
Position (kb)
1872
1873
1874
1875 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1871.550 kb on + strand at 1871.550 kb on + strand at 1871.551 kb on - strand at 1871.561 kb on + strand at 1871.562 kb on - strand at 1871.584 kb on - strand, within yhcC at 1871.595 kb on + strand, within yhcC at 1871.596 kb on - strand, within yhcC at 1871.625 kb on + strand, within yhcC at 1871.699 kb on + strand, within yhcC at 1871.700 kb on - strand, within yhcC at 1871.700 kb on - strand, within yhcC at 1871.719 kb on + strand, within yhcC at 1871.740 kb on + strand, within yhcC at 1871.742 kb on + strand, within yhcC at 1871.742 kb on + strand, within yhcC at 1871.778 kb on + strand, within yhcC at 1871.778 kb on + strand, within yhcC at 1871.778 kb on + strand, within yhcC at 1871.778 kb on + strand, within yhcC at 1871.778 kb on + strand, within yhcC at 1871.779 kb on - strand, within yhcC at 1871.779 kb on - strand, within yhcC at 1871.779 kb on - strand, within yhcC at 1871.779 kb on - strand, within yhcC at 1871.779 kb on - strand, within yhcC at 1871.779 kb on - strand, within yhcC at 1871.779 kb on - strand, within yhcC at 1871.809 kb on - strand, within yhcC at 1871.809 kb on - strand, within yhcC at 1871.879 kb on - strand, within yhcC at 1871.880 kb on + strand, within yhcC at 1871.880 kb on + strand, within yhcC at 1871.880 kb on + strand, within yhcC at 1871.880 kb on + strand, within yhcC at 1871.881 kb on - strand, within yhcC at 1871.881 kb on - strand, within yhcC at 1871.919 kb on - strand, within yhcC at 1871.985 kb on + strand, within yhcC at 1872.032 kb on + strand, within yhcC at 1872.032 kb on + strand, within yhcC at 1872.033 kb on - strand, within yhcC at 1872.114 kb on - strand, within yhcC at 1872.133 kb on - strand, within yhcC at 1872.133 kb on - strand, within yhcC at 1872.133 kb on - strand, within yhcC at 1872.253 kb on + strand, within yhcC at 1872.253 kb on + strand, within yhcC at 1872.253 kb on + strand, within yhcC at 1872.254 kb on - strand, within yhcC at 1872.346 kb on + strand at 1872.347 kb on - strand at 1872.365 kb on + strand at 1872.366 kb on - strand at 1872.409 kb on + strand at 1872.409 kb on + strand at 1872.447 kb on + strand at 1872.447 kb on + strand at 1872.447 kb on + strand at 1872.448 kb on - strand at 1872.448 kb on - strand at 1872.448 kb on - strand at 1872.450 kb on - strand at 1872.454 kb on + strand at 1872.454 kb on + strand at 1872.454 kb on + strand at 1872.454 kb on + strand at 1872.454 kb on + strand at 1872.454 kb on + strand at 1872.454 kb on + strand at 1872.455 kb on - strand at 1872.534 kb on + strand at 1872.534 kb on + strand at 1872.534 kb on + strand at 1872.534 kb on + strand at 1872.537 kb on + strand at 1872.537 kb on + strand at 1872.537 kb on + strand at 1872.537 kb on + strand at 1872.619 kb on + strand at 1872.671 kb on + strand at 1872.680 kb on + strand at 1872.680 kb on + strand at 1872.837 kb on - strand, within arcB at 1872.840 kb on - strand, within arcB at 1872.851 kb on - strand, within arcB at 1872.976 kb on + strand, within arcB at 1872.976 kb on + strand, within arcB at 1873.029 kb on - strand, within arcB at 1873.188 kb on + strand, within arcB at 1873.188 kb on + strand, within arcB at 1873.254 kb on + strand, within arcB at 1873.364 kb on + strand, within arcB at 1873.365 kb on - strand, within arcB at 1873.391 kb on + strand, within arcB at 1873.518 kb on - strand, within arcB at 1873.532 kb on + strand, within arcB at 1873.533 kb on - strand, within arcB at 1873.731 kb on - strand, within arcB at 1873.866 kb on + strand, within arcB at 1873.866 kb on + strand, within arcB at 1873.866 kb on + strand, within arcB at 1873.866 kb on + strand, within arcB at 1873.866 kb on + strand, within arcB at 1873.866 kb on + strand, within arcB at 1873.867 kb on - strand, within arcB at 1873.967 kb on + strand, within arcB at 1874.459 kb on + strand, within arcB at 1874.460 kb on - strand, within arcB at 1874.483 kb on + strand, within arcB at 1874.483 kb on + strand, within arcB at 1874.536 kb on + strand, within arcB at 1874.657 kb on + strand at 1874.750 kb on + strand at 1874.800 kb on + strand at 1874.870 kb on - strand at 1874.910 kb on + strand at 1874.911 kb on - strand at 1874.911 kb on - strand at 1874.914 kb on - strand at 1874.924 kb on - strand at 1874.977 kb on - strand at 1874.989 kb on - strand at 1875.001 kb on + strand at 1875.001 kb on + strand at 1875.153 kb on - strand, within elbB at 1875.153 kb on - strand, within elbB at 1875.156 kb on + strand, within elbB at 1875.157 kb on - strand, within elbB at 1875.216 kb on + strand, within elbB at 1875.227 kb on + strand, within elbB at 1875.227 kb on + strand, within elbB at 1875.374 kb on + strand, within elbB at 1875.422 kb on + strand, within elbB at 1875.422 kb on + strand, within elbB at 1875.422 kb on + strand, within elbB at 1875.423 kb on - strand, within elbB at 1875.471 kb on + strand, within elbB at 1875.471 kb on + strand, within elbB at 1875.471 kb on + strand, within elbB at 1875.477 kb on + strand, within elbB at 1875.477 kb on + strand, within elbB at 1875.477 kb on + strand, within elbB at 1875.478 kb on - strand, within elbB at 1875.624 kb on + strand, within elbB at 1875.624 kb on + strand, within elbB at 1875.625 kb on - strand, within elbB at 1875.646 kb on + strand, within elbB at 1875.646 kb on + strand, within elbB at 1875.646 kb on + strand, within elbB at 1875.646 kb on + strand, within elbB at 1875.646 kb on + strand, within elbB at 1875.646 kb on + strand, within elbB at 1875.646 kb on + strand, within elbB at 1875.646 kb on + strand, within elbB at 1875.646 kb on + strand, within elbB at 1875.646 kb on + strand, within elbB at 1875.646 kb on + strand, within elbB at 1875.647 kb on - strand, within elbB at 1875.647 kb on - strand, within elbB at 1875.647 kb on - strand, within elbB at 1875.647 kb on - strand, within elbB at 1875.647 kb on - strand, within elbB at 1875.647 kb on - strand, within elbB at 1875.648 kb on + strand, within elbB at 1875.648 kb on + strand, within elbB at 1875.648 kb on + strand, within elbB at 1875.648 kb on + strand, within elbB at 1875.648 kb on + strand, within elbB at 1875.648 kb on + strand, within elbB at 1875.648 kb on + strand, within elbB at 1875.648 kb on + strand, within elbB at 1875.648 kb on + strand, within elbB at 1875.649 kb on - strand, within elbB at 1875.649 kb on - strand, within elbB at 1875.649 kb on - strand, within elbB at 1875.649 kb on - strand, within elbB at 1875.649 kb on - strand, within elbB at 1875.649 kb on - strand, within elbB at 1875.690 kb on + strand at 1875.750 kb on - strand at 1875.824 kb on + strand, within mtgA at 1875.825 kb on - strand, within mtgA
Per-strain Table
Position Strand Gene LocusTag Fraction K25 remove 1,871,550 + +1.0 1,871,550 + +0.5 1,871,551 - +0.1 1,871,561 + +0.1 1,871,562 - +0.5 1,871,584 - yhcC NOLOHH_09690 0.11 +0.1 1,871,595 + yhcC NOLOHH_09690 0.12 +0.4 1,871,596 - yhcC NOLOHH_09690 0.12 -0.0 1,871,625 + yhcC NOLOHH_09690 0.15 +0.5 1,871,699 + yhcC NOLOHH_09690 0.23 +0.2 1,871,700 - yhcC NOLOHH_09690 0.23 +0.6 1,871,700 - yhcC NOLOHH_09690 0.23 -0.4 1,871,719 + yhcC NOLOHH_09690 0.25 -2.1 1,871,740 + yhcC NOLOHH_09690 0.28 -0.1 1,871,742 + yhcC NOLOHH_09690 0.28 +1.0 1,871,742 + yhcC NOLOHH_09690 0.28 -0.5 1,871,778 + yhcC NOLOHH_09690 0.32 +0.5 1,871,778 + yhcC NOLOHH_09690 0.32 +0.4 1,871,778 + yhcC NOLOHH_09690 0.32 -0.6 1,871,778 + yhcC NOLOHH_09690 0.32 +0.6 1,871,778 + yhcC NOLOHH_09690 0.32 +0.2 1,871,779 - yhcC NOLOHH_09690 0.32 -0.5 1,871,779 - yhcC NOLOHH_09690 0.32 +0.1 1,871,779 - yhcC NOLOHH_09690 0.32 -0.3 1,871,779 - yhcC NOLOHH_09690 0.32 +0.1 1,871,779 - yhcC NOLOHH_09690 0.32 +0.2 1,871,779 - yhcC NOLOHH_09690 0.32 -0.1 1,871,779 - yhcC NOLOHH_09690 0.32 -0.3 1,871,809 - yhcC NOLOHH_09690 0.35 +0.8 1,871,809 - yhcC NOLOHH_09690 0.35 +0.5 1,871,879 - yhcC NOLOHH_09690 0.43 -0.4 1,871,880 + yhcC NOLOHH_09690 0.43 +0.4 1,871,880 + yhcC NOLOHH_09690 0.43 +0.2 1,871,880 + yhcC NOLOHH_09690 0.43 -0.2 1,871,880 + yhcC NOLOHH_09690 0.43 +0.4 1,871,881 - yhcC NOLOHH_09690 0.43 +0.7 1,871,881 - yhcC NOLOHH_09690 0.43 +0.3 1,871,919 - yhcC NOLOHH_09690 0.47 -1.2 1,871,985 + yhcC NOLOHH_09690 0.54 +1.1 1,872,032 + yhcC NOLOHH_09690 0.59 -0.2 1,872,032 + yhcC NOLOHH_09690 0.59 -0.7 1,872,033 - yhcC NOLOHH_09690 0.59 +0.8 1,872,114 - yhcC NOLOHH_09690 0.68 +0.2 1,872,133 - yhcC NOLOHH_09690 0.70 -1.3 1,872,133 - yhcC NOLOHH_09690 0.70 -1.1 1,872,133 - yhcC NOLOHH_09690 0.70 +0.6 1,872,253 + yhcC NOLOHH_09690 0.83 -0.9 1,872,253 + yhcC NOLOHH_09690 0.83 -0.2 1,872,253 + yhcC NOLOHH_09690 0.83 +0.7 1,872,254 - yhcC NOLOHH_09690 0.83 +0.4 1,872,346 + -1.5 1,872,347 - +0.3 1,872,365 + -0.3 1,872,366 - +0.3 1,872,409 + -1.2 1,872,409 + +0.3 1,872,447 + -0.1 1,872,447 + -0.2 1,872,447 + +0.3 1,872,448 - +0.7 1,872,448 - +0.7 1,872,448 - -0.4 1,872,450 - -0.5 1,872,454 + -0.9 1,872,454 + +0.0 1,872,454 + -0.1 1,872,454 + -1.0 1,872,454 + +1.8 1,872,454 + +0.2 1,872,454 + -0.1 1,872,455 - +0.4 1,872,534 + -1.7 1,872,534 + -0.5 1,872,534 + -0.2 1,872,534 + -0.9 1,872,537 + -0.8 1,872,537 + -0.1 1,872,537 + +4.1 1,872,537 + +1.0 1,872,619 + -0.7 1,872,671 + -0.5 1,872,680 + -2.0 1,872,680 + -2.6 1,872,837 - arcB NOLOHH_09695 0.14 -1.2 1,872,840 - arcB NOLOHH_09695 0.14 -0.1 1,872,851 - arcB NOLOHH_09695 0.15 +0.2 1,872,976 + arcB NOLOHH_09695 0.20 +2.4 1,872,976 + arcB NOLOHH_09695 0.20 +0.2 1,873,029 - arcB NOLOHH_09695 0.22 -1.2 1,873,188 + arcB NOLOHH_09695 0.29 -1.3 1,873,188 + arcB NOLOHH_09695 0.29 +0.3 1,873,254 + arcB NOLOHH_09695 0.32 -1.0 1,873,364 + arcB NOLOHH_09695 0.37 -1.5 1,873,365 - arcB NOLOHH_09695 0.37 -0.7 1,873,391 + arcB NOLOHH_09695 0.38 -2.4 1,873,518 - arcB NOLOHH_09695 0.43 -1.1 1,873,532 + arcB NOLOHH_09695 0.44 -0.2 1,873,533 - arcB NOLOHH_09695 0.44 -0.5 1,873,731 - arcB NOLOHH_09695 0.52 -1.2 1,873,866 + arcB NOLOHH_09695 0.58 +0.2 1,873,866 + arcB NOLOHH_09695 0.58 -0.3 1,873,866 + arcB NOLOHH_09695 0.58 -0.4 1,873,866 + arcB NOLOHH_09695 0.58 -0.2 1,873,866 + arcB NOLOHH_09695 0.58 -0.2 1,873,866 + arcB NOLOHH_09695 0.58 -1.5 1,873,867 - arcB NOLOHH_09695 0.58 -1.1 1,873,967 + arcB NOLOHH_09695 0.62 -3.1 1,874,459 + arcB NOLOHH_09695 0.84 +0.5 1,874,460 - arcB NOLOHH_09695 0.84 -0.8 1,874,483 + arcB NOLOHH_09695 0.85 -2.0 1,874,483 + arcB NOLOHH_09695 0.85 -0.2 1,874,536 + arcB NOLOHH_09695 0.87 -0.8 1,874,657 + -1.4 1,874,750 + -0.8 1,874,800 + +1.0 1,874,870 - -0.7 1,874,910 + +0.5 1,874,911 - -0.3 1,874,911 - +1.1 1,874,914 - -0.2 1,874,924 - -0.2 1,874,977 - -0.3 1,874,989 - +0.3 1,875,001 + +0.1 1,875,001 + -0.5 1,875,153 - elbB NOLOHH_09705 0.12 -0.0 1,875,153 - elbB NOLOHH_09705 0.12 +0.2 1,875,156 + elbB NOLOHH_09705 0.13 +0.4 1,875,157 - elbB NOLOHH_09705 0.13 -0.3 1,875,216 + elbB NOLOHH_09705 0.22 -0.2 1,875,227 + elbB NOLOHH_09705 0.24 +1.0 1,875,227 + elbB NOLOHH_09705 0.24 +0.4 1,875,374 + elbB NOLOHH_09705 0.46 +0.6 1,875,422 + elbB NOLOHH_09705 0.53 +0.4 1,875,422 + elbB NOLOHH_09705 0.53 +0.1 1,875,422 + elbB NOLOHH_09705 0.53 -0.2 1,875,423 - elbB NOLOHH_09705 0.54 -0.2 1,875,471 + elbB NOLOHH_09705 0.61 -0.4 1,875,471 + elbB NOLOHH_09705 0.61 -0.4 1,875,471 + elbB NOLOHH_09705 0.61 -0.7 1,875,477 + elbB NOLOHH_09705 0.62 +0.5 1,875,477 + elbB NOLOHH_09705 0.62 +0.6 1,875,477 + elbB NOLOHH_09705 0.62 +1.0 1,875,478 - elbB NOLOHH_09705 0.62 -0.7 1,875,624 + elbB NOLOHH_09705 0.84 -0.5 1,875,624 + elbB NOLOHH_09705 0.84 -0.3 1,875,625 - elbB NOLOHH_09705 0.84 -0.7 1,875,646 + elbB NOLOHH_09705 0.88 +0.1 1,875,646 + elbB NOLOHH_09705 0.88 -0.9 1,875,646 + elbB NOLOHH_09705 0.88 +0.2 1,875,646 + elbB NOLOHH_09705 0.88 -0.9 1,875,646 + elbB NOLOHH_09705 0.88 -0.1 1,875,646 + elbB NOLOHH_09705 0.88 -1.7 1,875,646 + elbB NOLOHH_09705 0.88 -0.5 1,875,646 + elbB NOLOHH_09705 0.88 -0.8 1,875,646 + elbB NOLOHH_09705 0.88 +0.0 1,875,646 + elbB NOLOHH_09705 0.88 -0.4 1,875,646 + elbB NOLOHH_09705 0.88 +0.4 1,875,647 - elbB NOLOHH_09705 0.88 -1.5 1,875,647 - elbB NOLOHH_09705 0.88 -0.4 1,875,647 - elbB NOLOHH_09705 0.88 +0.2 1,875,647 - elbB NOLOHH_09705 0.88 +0.6 1,875,647 - elbB NOLOHH_09705 0.88 +1.2 1,875,647 - elbB NOLOHH_09705 0.88 -0.0 1,875,648 + elbB NOLOHH_09705 0.88 +1.2 1,875,648 + elbB NOLOHH_09705 0.88 +0.6 1,875,648 + elbB NOLOHH_09705 0.88 -0.0 1,875,648 + elbB NOLOHH_09705 0.88 -1.1 1,875,648 + elbB NOLOHH_09705 0.88 +0.4 1,875,648 + elbB NOLOHH_09705 0.88 -0.9 1,875,648 + elbB NOLOHH_09705 0.88 +0.0 1,875,648 + elbB NOLOHH_09705 0.88 +0.4 1,875,648 + elbB NOLOHH_09705 0.88 +0.1 1,875,649 - elbB NOLOHH_09705 0.88 -0.1 1,875,649 - elbB NOLOHH_09705 0.88 +0.8 1,875,649 - elbB NOLOHH_09705 0.88 -0.2 1,875,649 - elbB NOLOHH_09705 0.88 +0.4 1,875,649 - elbB NOLOHH_09705 0.88 -0.8 1,875,649 - elbB NOLOHH_09705 0.88 +0.6 1,875,690 + -0.3 1,875,750 - -0.4 1,875,824 + mtgA NOLOHH_09710 0.14 +0.0 1,875,825 - mtgA NOLOHH_09710 0.14 -0.5
Or see this region's nucleotide sequence