Strain Fitness in Escherichia coli ECOR27 around NOLOHH_04505

Experiment: K25

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntpurA and yjeT are separated by 103 nucleotidesyjeT and hflC are separated by 81 nucleotideshflC and hflK are separated by 2 nucleotides NOLOHH_04495: purA - adenylosuccinate synthase, at 812,910 to 814,208 purA NOLOHH_04500: yjeT - Uncharacterized protein YjeT, at 814,312 to 814,509 yjeT NOLOHH_04505: hflC - protease modulator HflC, at 814,591 to 815,595 hflC NOLOHH_04510: hflK - FtsH protease activity modulator HflK, at 815,598 to 816,857 hflK Position (kb) 814 815 816Strain fitness (log2 ratio) -2 -1 0 1 2at 813.609 kb on - strand, within purAat 813.881 kb on - strand, within purAat 814.015 kb on - strand, within purAat 814.114 kb on - strandat 814.114 kb on - strandat 814.114 kb on - strandat 814.121 kb on - strandat 814.244 kb on - strandat 814.337 kb on + strand, within yjeTat 814.337 kb on + strand, within yjeTat 814.337 kb on + strand, within yjeTat 814.337 kb on + strand, within yjeTat 814.337 kb on + strand, within yjeTat 814.338 kb on - strand, within yjeTat 814.338 kb on - strand, within yjeTat 814.338 kb on - strand, within yjeTat 814.341 kb on - strand, within yjeTat 814.390 kb on - strand, within yjeTat 814.588 kb on - strandat 814.588 kb on - strandat 814.590 kb on - strandat 814.590 kb on - strandat 814.590 kb on - strandat 814.590 kb on - strandat 814.716 kb on - strand, within hflCat 815.322 kb on - strand, within hflCat 815.392 kb on - strand, within hflCat 815.590 kb on - strandat 815.655 kb on - strandat 815.879 kb on - strand, within hflKat 816.003 kb on - strand, within hflKat 816.003 kb on - strand, within hflKat 816.047 kb on - strand, within hflKat 816.168 kb on - strand, within hflKat 816.179 kb on - strand, within hflKat 816.263 kb on - strand, within hflKat 816.267 kb on - strand, within hflKat 816.564 kb on - strand, within hflK

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Per-strain Table

Position Strand Gene LocusTag Fraction K25
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813,609 - purA NOLOHH_04495 0.54 +1.2
813,881 - purA NOLOHH_04495 0.75 -1.3
814,015 - purA NOLOHH_04495 0.85 -0.0
814,114 - -0.0
814,114 - +0.8
814,114 - -1.8
814,121 - +1.3
814,244 - -0.4
814,337 + yjeT NOLOHH_04500 0.13 -0.2
814,337 + yjeT NOLOHH_04500 0.13 +0.5
814,337 + yjeT NOLOHH_04500 0.13 -0.4
814,337 + yjeT NOLOHH_04500 0.13 -1.2
814,337 + yjeT NOLOHH_04500 0.13 -0.0
814,338 - yjeT NOLOHH_04500 0.13 -1.2
814,338 - yjeT NOLOHH_04500 0.13 +0.8
814,338 - yjeT NOLOHH_04500 0.13 +1.1
814,341 - yjeT NOLOHH_04500 0.15 +2.3
814,390 - yjeT NOLOHH_04500 0.39 -1.4
814,588 - +0.1
814,588 - -0.9
814,590 - +0.6
814,590 - -0.1
814,590 - -0.9
814,590 - +0.6
814,716 - hflC NOLOHH_04505 0.12 -0.1
815,322 - hflC NOLOHH_04505 0.73 -0.8
815,392 - hflC NOLOHH_04505 0.80 -1.9
815,590 - +0.2
815,655 - +0.8
815,879 - hflK NOLOHH_04510 0.22 +0.1
816,003 - hflK NOLOHH_04510 0.32 -1.5
816,003 - hflK NOLOHH_04510 0.32 +0.5
816,047 - hflK NOLOHH_04510 0.36 -0.0
816,168 - hflK NOLOHH_04510 0.45 +0.0
816,179 - hflK NOLOHH_04510 0.46 +1.8
816,263 - hflK NOLOHH_04510 0.53 +0.5
816,267 - hflK NOLOHH_04510 0.53 -0.4
816,564 - hflK NOLOHH_04510 0.77 -0.4

Or see this region's nucleotide sequence