Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS22685

Experiment: (+)-Arabinogalactan; autoclaved 5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	(+)-Arabinogalactan; autoclaved 5 mg/ml (C)
2,071,053	+				+0.1
2,071,154	-				+0.4
2,071,175	-				+0.7
2,071,178	-				-0.3
2,071,187	+				-0.2
2,071,187	+				+0.2
2,071,429	+		ABI39_RS07650	0.51	-0.6
2,071,446	+		ABI39_RS07650	0.56	-0.2
2,071,458	+		ABI39_RS07650	0.59	+0.0
2,071,459	-		ABI39_RS07650	0.59	-0.5
2,071,459	-		ABI39_RS07650	0.59	-0.9
2,071,891	-		ABI39_RS07655	0.72	+1.2
2,071,979	+				-0.1
2,072,054	-		ABI39_RS22685	0.25	-0.4
2,072,170	-				-0.2
2,072,180	+				+0.0
2,072,184	+				-0.6
2,072,184	+				+0.4
2,072,185	-				+0.4
2,072,188	-				+0.2
2,072,188	-				+0.0
2,072,193	+				+0.0
2,072,217	-				+0.5
2,072,232	+		ABI39_RS23165	0.12	+0.1
2,072,337	-		ABI39_RS23165	0.32	+0.1
2,072,383	-		ABI39_RS23165	0.41	-0.4
2,072,408	-		ABI39_RS23165	0.46	+0.4
2,072,408	-		ABI39_RS23165	0.46	-0.4
2,072,408	-		ABI39_RS23165	0.46	+0.4
2,072,712	-				-0.2
2,072,767	+				-1.0
2,072,896	-				-0.0
2,072,896	-				-0.4
2,072,960	+				-0.1
2,072,960	+				-0.7
2,072,960	+				-0.1
2,073,089	-				+0.0
2,073,144	+				-0.6
2,073,150	+				+0.2
2,073,151	-				-0.1
2,073,173	-				-0.3