Experiment: (+)-Arabinogalactan; autoclaved 5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS02855 and ABI39_RS02860 are separated by 58 nucleotides ABI39_RS02860 and ABI39_RS02865 are separated by 29 nucleotides ABI39_RS02865 and ABI39_RS02870 are separated by 385 nucleotides
ABI39_RS02855: ABI39_RS02855 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 828,014 to 829,171
_RS02855
ABI39_RS02860: ABI39_RS02860 - NigD-like N-terminal domain-containing protein, at 829,230 to 829,880
_RS02860
ABI39_RS02865: ABI39_RS02865 - rhodanese-like domain-containing protein, at 829,910 to 830,308
_RS02865
ABI39_RS02870: ABI39_RS02870 - acetylornithine carbamoyltransferase, at 830,694 to 831,659
_RS02870
Position (kb) 829
830
831 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 829.170 kb on - strand at 829.297 kb on - strand, within ABI39_RS02860 at 829.300 kb on + strand, within ABI39_RS02860 at 829.301 kb on - strand, within ABI39_RS02860 at 829.323 kb on - strand, within ABI39_RS02860 at 829.363 kb on - strand, within ABI39_RS02860 at 829.458 kb on + strand, within ABI39_RS02860 at 829.458 kb on + strand, within ABI39_RS02860 at 829.458 kb on + strand, within ABI39_RS02860 at 829.459 kb on - strand, within ABI39_RS02860 at 829.459 kb on - strand, within ABI39_RS02860 at 829.506 kb on + strand, within ABI39_RS02860 at 829.627 kb on + strand, within ABI39_RS02860 at 829.711 kb on - strand, within ABI39_RS02860 at 829.842 kb on + strand at 830.061 kb on + strand, within ABI39_RS02865 at 830.184 kb on - strand, within ABI39_RS02865 at 830.249 kb on + strand, within ABI39_RS02865 at 830.250 kb on - strand, within ABI39_RS02865 at 830.334 kb on + strand at 830.412 kb on - strand at 830.498 kb on + strand at 830.547 kb on - strand at 830.964 kb on - strand, within ABI39_RS02870 at 830.964 kb on - strand, within ABI39_RS02870 at 831.041 kb on - strand, within ABI39_RS02870 at 831.263 kb on - strand, within ABI39_RS02870 at 831.295 kb on + strand, within ABI39_RS02870 at 831.296 kb on - strand, within ABI39_RS02870
Per-strain Table
Position Strand Gene LocusTag Fraction (+)-Arabinogalactan; autoclaved 5 mg/ml (C) remove 829,170 - +0.4 829,297 - ABI39_RS02860 0.10 -0.1 829,300 + ABI39_RS02860 0.11 -0.4 829,301 - ABI39_RS02860 0.11 -0.5 829,323 - ABI39_RS02860 0.14 +0.6 829,363 - ABI39_RS02860 0.20 +0.3 829,458 + ABI39_RS02860 0.35 +0.1 829,458 + ABI39_RS02860 0.35 -0.7 829,458 + ABI39_RS02860 0.35 +1.1 829,459 - ABI39_RS02860 0.35 -0.4 829,459 - ABI39_RS02860 0.35 -0.6 829,506 + ABI39_RS02860 0.42 -0.1 829,627 + ABI39_RS02860 0.61 +0.2 829,711 - ABI39_RS02860 0.74 -0.0 829,842 + +0.6 830,061 + ABI39_RS02865 0.38 +0.5 830,184 - ABI39_RS02865 0.69 -0.3 830,249 + ABI39_RS02865 0.85 -0.5 830,250 - ABI39_RS02865 0.85 -0.0 830,334 + -0.0 830,412 - +0.8 830,498 + -0.2 830,547 - -0.2 830,964 - ABI39_RS02870 0.28 -5.5 830,964 - ABI39_RS02870 0.28 -4.2 831,041 - ABI39_RS02870 0.36 -5.0 831,263 - ABI39_RS02870 0.59 -5.6 831,295 + ABI39_RS02870 0.62 -6.1 831,296 - ABI39_RS02870 0.62 -0.9
Or see this region's nucleotide sequence