Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS09165

Experiment: D-Glucose 5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose 5 mg/ml (C)
2,467,631	+		ABI39_RS09160	0.19	+0.1
2,467,701	-		ABI39_RS09160	0.25	+0.1
2,467,921	-		ABI39_RS09160	0.44	+0.4
2,467,921	-		ABI39_RS09160	0.44	-0.0
2,467,954	+		ABI39_RS09160	0.47	-0.1
2,467,997	+		ABI39_RS09160	0.51	-0.4
2,467,998	-		ABI39_RS09160	0.51	+0.2
2,467,998	-		ABI39_RS09160	0.51	-0.4
2,468,042	+		ABI39_RS09160	0.55	-0.2
2,468,144	-		ABI39_RS09160	0.63	+0.4
2,468,250	-		ABI39_RS09160	0.73	-0.0
2,468,264	+		ABI39_RS09160	0.74	-0.6
2,468,352	-		ABI39_RS09160	0.81	-0.0
2,468,450	-		ABI39_RS09160	0.90	+0.3
2,468,536	+				-0.5
2,468,536	+				+0.7
2,468,648	+				-0.2
2,468,648	+				-0.3
2,468,649	-				+0.3
2,468,654	+				+0.3
2,468,659	+				+1.1
2,468,659	+				+0.1
2,468,660	-				-0.3
2,468,772	-		ABI39_RS09165	0.11	+0.1
2,468,772	-		ABI39_RS09165	0.11	+0.1
2,468,789	+		ABI39_RS09165	0.12	+0.1
2,468,824	+		ABI39_RS09165	0.14	-0.1
2,468,828	+		ABI39_RS09165	0.15	+0.0
2,468,851	-		ABI39_RS09165	0.16	-0.2
2,469,174	-		ABI39_RS09165	0.35	-0.7
2,469,174	-		ABI39_RS09165	0.35	-0.0
2,469,285	-		ABI39_RS09165	0.41	-0.1
2,469,299	-		ABI39_RS09165	0.42	-0.7
2,469,311	+		ABI39_RS09165	0.43	+0.6
2,469,340	+		ABI39_RS09165	0.44	-0.2
2,469,359	-		ABI39_RS09165	0.45	+0.1
2,469,480	-		ABI39_RS09165	0.52	-0.2
2,469,485	-		ABI39_RS09165	0.53	+0.1
2,469,503	+		ABI39_RS09165	0.54	+0.3
2,469,531	-		ABI39_RS09165	0.55	-0.2
2,469,539	+		ABI39_RS09165	0.56	-0.0
2,469,623	+		ABI39_RS09165	0.61	-0.7
2,469,648	-		ABI39_RS09165	0.62	-0.0
2,469,651	+		ABI39_RS09165	0.62	-0.2
2,469,651	+		ABI39_RS09165	0.62	+0.1
2,469,791	+		ABI39_RS09165	0.70	-0.0
2,469,820	-		ABI39_RS09165	0.72	+1.2
2,469,831	+		ABI39_RS09165	0.73	-0.0
2,469,832	-		ABI39_RS09165	0.73	+0.7
2,469,900	-		ABI39_RS09165	0.77	+0.3
2,469,915	+		ABI39_RS09165	0.78	+0.2
2,469,957	+		ABI39_RS09165	0.80	-0.1
2,470,215	+				-0.2
2,470,215	+				-0.6
2,470,216	-				+0.2
2,470,300	-				-0.5
2,470,319	+				+0.1
2,470,320	-				-0.6
2,470,404	+				+0.4
2,470,477	+				-0.0
2,470,478	-				-0.0
2,470,478	-				-0.4
2,470,479	+				+0.4
2,470,519	+				+0.1
2,470,560	-				-0.0
2,470,610	+				+0.2
2,470,634	+				+0.2
2,470,645	+				+0.1
2,470,701	+				+0.6
2,470,731	-				+0.2
2,470,772	+				+0.8
2,470,987	+		ABI39_RS09170	0.11	+0.1
2,470,987	+		ABI39_RS09170	0.11	+0.3
2,470,987	+		ABI39_RS09170	0.11	+0.0
2,470,995	-		ABI39_RS09170	0.11	+0.0
2,471,050	-		ABI39_RS09170	0.13	+0.0
2,471,225	-		ABI39_RS09170	0.17	+0.2