Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS06590

Experiment: D-Glucose 5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose 5 mg/ml (C)
1,828,716	+		ABI39_RS06585	0.84	-1.1
1,828,832	-		ABI39_RS06585	0.86	-2.2
1,828,840	-		ABI39_RS06585	0.86	-1.7
1,828,902	+		ABI39_RS06585	0.88	-2.6
1,829,044	-				-1.4
1,829,064	-				-2.4
1,829,070	+				-1.6
1,829,134	-				-2.3
1,829,359	+				-3.7
1,829,442	+				-1.3
1,829,462	+				-2.7
1,829,464	+				-0.5
1,829,573	-				-1.7
1,829,741	-				-2.2
1,829,798	-				-1.1
1,829,846	-		ABI39_RS06590	0.11	-1.7
1,829,861	-		ABI39_RS06590	0.12	-3.3
1,829,888	+		ABI39_RS06590	0.13	-1.3
1,830,087	+		ABI39_RS06590	0.26	-2.9
1,830,100	+		ABI39_RS06590	0.27	-1.2
1,830,127	+		ABI39_RS06590	0.29	-1.2
1,830,177	-		ABI39_RS06590	0.32	-0.5
1,830,205	+		ABI39_RS06590	0.34	+0.2
1,830,212	+		ABI39_RS06590	0.35	+0.8
1,830,213	-		ABI39_RS06590	0.35	-1.1
1,830,213	-		ABI39_RS06590	0.35	-1.1
1,830,497	+		ABI39_RS06590	0.53	-0.1
1,830,519	-		ABI39_RS06590	0.55	-0.6
1,830,529	+		ABI39_RS06590	0.55	+0.2
1,830,553	+		ABI39_RS06590	0.57	-1.0
1,830,557	+		ABI39_RS06590	0.57	-0.6
1,830,557	+		ABI39_RS06590	0.57	+0.6
1,830,565	-		ABI39_RS06590	0.58	-1.4
1,830,565	-		ABI39_RS06590	0.58	-1.4
1,830,650	-		ABI39_RS06590	0.63	-2.2
1,830,937	+		ABI39_RS06590	0.82	-0.5
1,831,230	+				+0.3
1,831,230	+				-0.6
1,831,231	-				-1.9
1,831,340	+				-0.7
1,831,366	+				-1.5
1,831,390	-				-2.4
1,831,390	-				-2.3
1,831,415	-				-1.5
1,831,598	+		ABI39_RS06595	0.18	-1.5
1,831,599	-		ABI39_RS06595	0.18	-1.6
1,831,913	+		ABI39_RS06595	0.34	-0.9
1,831,915	+		ABI39_RS06595	0.34	-0.2
1,831,956	+		ABI39_RS06595	0.36	-2.0
1,831,957	-		ABI39_RS06595	0.36	-0.4
1,831,961	+		ABI39_RS06595	0.36	-1.5
1,831,961	+		ABI39_RS06595	0.36	-2.0
1,832,053	-		ABI39_RS06595	0.41	-1.2
1,832,174	+		ABI39_RS06595	0.47	-1.2