Strain Fitness in Escherichia coli ECOR27 around NOLOHH_10090

Experiment: Bas05

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas05
1,943,006	-	agaS	NOLOHH_10085	0.54	+0.5
1,943,242	-	agaS	NOLOHH_10085	0.75	+0.3
1,943,335	+	agaS	NOLOHH_10085	0.83	+0.3
1,943,407	+	agaS	NOLOHH_10085	0.89	+0.8
1,943,407	+	agaS	NOLOHH_10085	0.89	+0.9
1,943,423	+				-1.3
1,943,424	-				-0.4
1,943,424	-				-0.8
1,943,494	+				-0.3
1,943,520	+				+0.0
1,943,533	+				-0.1
1,943,533	+				+0.0
1,943,773	+				+0.4
1,943,773	+				+0.1
1,943,773	+				-1.1
1,943,773	+				+0.9
1,943,773	+				-0.2
1,943,774	-				-0.5
1,943,774	-				+0.5
1,943,774	-				+0.1
1,943,774	-				-1.5
1,943,774	-				+1.1
1,943,782	+				-0.4
1,943,782	+				-0.3
1,943,782	+				-2.6
1,943,782	+				-0.3
1,943,782	+				-0.1
1,943,897	-				+0.3
1,943,973	+				+1.6
1,944,031	-	nagA	NOLOHH_10090	0.13	-3.0
1,944,169	+	nagA	NOLOHH_10090	0.25	-1.4
1,944,169	+	nagA	NOLOHH_10090	0.25	+0.9
1,944,169	+	nagA	NOLOHH_10090	0.25	-0.3
1,944,170	-	nagA	NOLOHH_10090	0.25	+1.2
1,944,170	-	nagA	NOLOHH_10090	0.25	+0.3
1,944,174	+	nagA	NOLOHH_10090	0.26	+1.2
1,944,174	+	nagA	NOLOHH_10090	0.26	-0.2
1,944,174	+	nagA	NOLOHH_10090	0.26	-0.2
1,944,175	-	nagA	NOLOHH_10090	0.26	+0.2
1,944,175	-	nagA	NOLOHH_10090	0.26	+0.7
1,944,175	-	nagA	NOLOHH_10090	0.26	-0.1
1,944,175	-	nagA	NOLOHH_10090	0.26	-0.2
1,944,175	-	nagA	NOLOHH_10090	0.26	+0.8
1,944,175	-	nagA	NOLOHH_10090	0.26	-0.4
1,944,175	-	nagA	NOLOHH_10090	0.26	+1.1
1,944,175	-	nagA	NOLOHH_10090	0.26	+0.3
1,944,358	+	nagA	NOLOHH_10090	0.42	-0.6
1,944,358	+	nagA	NOLOHH_10090	0.42	+0.3
1,944,358	+	nagA	NOLOHH_10090	0.42	+0.4
1,944,358	+	nagA	NOLOHH_10090	0.42	+0.6
1,944,358	+	nagA	NOLOHH_10090	0.42	+0.8
1,944,358	+	nagA	NOLOHH_10090	0.42	-0.1
1,944,359	-	nagA	NOLOHH_10090	0.42	-0.8
1,944,359	-	nagA	NOLOHH_10090	0.42	+0.4
1,944,377	+	nagA	NOLOHH_10090	0.43	-0.5
1,944,377	+	nagA	NOLOHH_10090	0.43	-0.0
1,944,377	+	nagA	NOLOHH_10090	0.43	+1.1
1,944,377	+	nagA	NOLOHH_10090	0.43	-0.4
1,944,378	-	nagA	NOLOHH_10090	0.44	-0.4
1,944,378	-	nagA	NOLOHH_10090	0.44	-0.9
1,944,378	-	nagA	NOLOHH_10090	0.44	+0.8
1,944,378	-	nagA	NOLOHH_10090	0.44	-0.0
1,944,463	+	nagA	NOLOHH_10090	0.51	+0.2
1,944,477	+	nagA	NOLOHH_10090	0.52	+0.2
1,944,478	-	nagA	NOLOHH_10090	0.52	-0.0
1,944,478	-	nagA	NOLOHH_10090	0.52	+0.3
1,944,535	+	nagA	NOLOHH_10090	0.57	+0.1
1,944,635	+	nagA	NOLOHH_10090	0.66	-0.1
1,944,636	-	nagA	NOLOHH_10090	0.66	+0.1
1,944,702	+	nagA	NOLOHH_10090	0.72	+0.2
1,944,703	-	nagA	NOLOHH_10090	0.72	+2.0
1,944,743	-	nagA	NOLOHH_10090	0.76	+0.5
1,944,805	+	nagA	NOLOHH_10090	0.81	+0.8
1,944,826	+	nagA	NOLOHH_10090	0.83	-0.6
1,944,826	+	nagA	NOLOHH_10090	0.83	+0.3
1,944,827	-	nagA	NOLOHH_10090	0.83	+0.1
1,944,850	+	nagA	NOLOHH_10090	0.85	+0.2
1,944,850	+	nagA	NOLOHH_10090	0.85	-0.1
1,944,851	-	nagA	NOLOHH_10090	0.85	-1.7
1,944,851	-	nagA	NOLOHH_10090	0.85	+2.0
1,944,851	-	nagA	NOLOHH_10090	0.85	+0.6
1,944,851	-	nagA	NOLOHH_10090	0.85	-0.0
1,944,866	+	nagA	NOLOHH_10090	0.87	+0.8
1,944,866	+	nagA	NOLOHH_10090	0.87	-1.5
1,944,866	+	nagA	NOLOHH_10090	0.87	-1.8
1,944,867	-	nagA	NOLOHH_10090	0.87	+0.2
1,944,867	-	nagA	NOLOHH_10090	0.87	+0.2
1,944,948	+				+0.3
1,945,017	+				-0.6
1,945,018	-				-0.3
1,945,159	-	agaF	NOLOHH_10095	0.33	+0.2
1,945,159	-	agaF	NOLOHH_10095	0.33	+0.0
1,945,316	+	agaF	NOLOHH_10095	0.69	+0.0
1,945,316	+	agaF	NOLOHH_10095	0.69	-0.7
1,945,316	+	agaF	NOLOHH_10095	0.69	-0.4
1,945,316	+	agaF	NOLOHH_10095	0.69	+0.5
1,945,317	-	agaF	NOLOHH_10095	0.70	+0.4
1,945,317	-	agaF	NOLOHH_10095	0.70	+2.4
1,945,317	-	agaF	NOLOHH_10095	0.70	+1.6
1,945,317	-	agaF	NOLOHH_10095	0.70	+0.3
1,945,443	+				-0.5
1,945,510	+				+0.7
1,945,573	-	agaE	NOLOHH_10100	0.12	-1.1
1,945,573	-	agaE	NOLOHH_10100	0.12	+0.3
1,945,677	+	agaE	NOLOHH_10100	0.24	+0.2
1,945,677	+	agaE	NOLOHH_10100	0.24	+0.6
1,945,677	+	agaE	NOLOHH_10100	0.24	-0.4
1,945,677	+	agaE	NOLOHH_10100	0.24	+0.3
1,945,677	+	agaE	NOLOHH_10100	0.24	+0.5
1,945,677	+	agaE	NOLOHH_10100	0.24	-0.2
1,945,677	+	agaE	NOLOHH_10100	0.24	+0.1
1,945,677	+	agaE	NOLOHH_10100	0.24	+0.6
1,945,677	+	agaE	NOLOHH_10100	0.24	+1.0
1,945,677	+	agaE	NOLOHH_10100	0.24	-0.0
1,945,678	-	agaE	NOLOHH_10100	0.24	-0.2
1,945,678	-	agaE	NOLOHH_10100	0.24	-0.2
1,945,678	-	agaE	NOLOHH_10100	0.24	-1.3
1,945,678	-	agaE	NOLOHH_10100	0.24	-0.5
1,945,678	-	agaE	NOLOHH_10100	0.24	-0.1
1,945,678	-	agaE	NOLOHH_10100	0.24	-0.2
1,945,678	-	agaE	NOLOHH_10100	0.24	+0.7
1,945,678	-	agaE	NOLOHH_10100	0.24	+0.2
1,945,678	-	agaE	NOLOHH_10100	0.24	+0.7
1,945,678	-	agaE	NOLOHH_10100	0.24	-0.6
1,945,678	-	agaE	NOLOHH_10100	0.24	-0.9
1,945,792	-	agaE	NOLOHH_10100	0.37	-0.8
1,945,792	-	agaE	NOLOHH_10100	0.37	+0.3
1,945,823	+	agaE	NOLOHH_10100	0.41	+0.3
1,945,824	-	agaE	NOLOHH_10100	0.41	-0.6
1,945,843	+	agaE	NOLOHH_10100	0.43	-0.8
1,945,843	+	agaE	NOLOHH_10100	0.43	-0.9
1,945,844	-	agaE	NOLOHH_10100	0.43	-0.2
1,945,844	-	agaE	NOLOHH_10100	0.43	-1.3
1,945,844	-	agaE	NOLOHH_10100	0.43	-1.0
1,945,844	-	agaE	NOLOHH_10100	0.43	-0.0
1,945,847	+	agaE	NOLOHH_10100	0.43	-0.8
1,945,864	+	agaE	NOLOHH_10100	0.45	-0.2
1,945,865	-	agaE	NOLOHH_10100	0.45	-0.2
1,945,865	-	agaE	NOLOHH_10100	0.45	+0.7
1,945,874	+	agaE	NOLOHH_10100	0.46	-0.4
1,945,875	-	agaE	NOLOHH_10100	0.47	+0.3
1,946,002	+	agaE	NOLOHH_10100	0.61	-0.1
1,946,003	-	agaE	NOLOHH_10100	0.61	+0.2
1,946,003	-	agaE	NOLOHH_10100	0.61	-0.5
1,946,003	-	agaE	NOLOHH_10100	0.61	-2.6
1,946,003	-	agaE	NOLOHH_10100	0.61	-0.2