Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS08850

Experiment: Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)
2,357,552	-		ABI39_RS08840	0.63	+0.1
2,357,570	-		ABI39_RS08840	0.65	+0.1
2,358,134	-		ABI39_RS08845	0.37	-0.1
2,358,206	-		ABI39_RS08845	0.50	+0.2
2,358,519	+				-1.0
2,358,519	+				-2.7
2,358,915	+		ABI39_RS08850	0.47	-1.2
2,358,944	+		ABI39_RS08850	0.50	-2.1
2,358,944	+		ABI39_RS08850	0.50	-2.5
2,359,072	+		ABI39_RS08850	0.64	-1.4
2,359,072	+		ABI39_RS08850	0.64	-2.1
2,359,408	+				-0.4
2,359,409	-				-0.4
2,359,632	+		ABI39_RS08855	0.46	+0.2
2,359,743	+		ABI39_RS08855	0.68	+0.3
2,359,778	+		ABI39_RS08855	0.75	+0.3
2,360,041	+		ABI39_RS08860	0.27	-0.5
2,360,045	+		ABI39_RS08860	0.27	+0.1