Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS06920

Experiment: Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)
1,917,970	+		ABI39_RS06915	0.66	+1.4
1,918,909	+		ABI39_RS06920	0.10	-3.2
1,918,982	-		ABI39_RS06920	0.20	-1.4
1,919,202	-		ABI39_RS06920	0.50	-0.9
1,919,255	+		ABI39_RS06920	0.57	-2.3
1,919,316	+		ABI39_RS06920	0.65	-2.0
1,919,455	+		ABI39_RS06920	0.83	-3.0
1,919,475	+		ABI39_RS06920	0.86	-2.0
1,919,498	+		ABI39_RS06920	0.89	-0.8
1,919,499	-		ABI39_RS06920	0.89	-2.8
1,919,600	-				-1.8
1,919,684	-				-2.7
1,919,850	+		ABI39_RS06925	0.22	-2.1
1,919,851	-		ABI39_RS06925	0.22	-2.3
1,919,863	-		ABI39_RS06925	0.23	-1.6
1,919,879	-		ABI39_RS06925	0.24	-0.9
1,919,881	-		ABI39_RS06925	0.25	-1.6
1,919,896	+		ABI39_RS06925	0.26	-3.2
1,919,896	+		ABI39_RS06925	0.26	-3.4
1,919,905	-		ABI39_RS06925	0.26	-2.0
1,919,905	-		ABI39_RS06925	0.26	-2.6
1,919,929	+		ABI39_RS06925	0.28	-2.4
1,919,941	+		ABI39_RS06925	0.29	-2.5
1,919,968	+		ABI39_RS06925	0.31	-0.1
1,919,969	-		ABI39_RS06925	0.32	-0.2
1,920,014	+		ABI39_RS06925	0.35	-3.5
1,920,271	-		ABI39_RS06925	0.55	-2.0
1,920,386	-		ABI39_RS06925	0.65	-2.4
1,920,406	+		ABI39_RS06925	0.66	-3.0
1,920,434	+		ABI39_RS06925	0.68	-1.0
1,920,504	-		ABI39_RS06925	0.74	-1.9
1,920,504	-		ABI39_RS06925	0.74	-3.7
1,920,558	+		ABI39_RS06925	0.78	-2.6
1,920,558	+		ABI39_RS06925	0.78	-3.3
1,920,567	-		ABI39_RS06925	0.79	-2.3