Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS04695

Experiment: Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)
1,314,818	-		ABI39_RS04690	0.52	-2.5
1,314,928	+		ABI39_RS04690	0.58	-4.3
1,314,929	-		ABI39_RS04690	0.58	-2.5
1,314,969	+		ABI39_RS04690	0.60	-3.9
1,314,970	-		ABI39_RS04690	0.60	-2.6
1,315,086	-		ABI39_RS04690	0.66	-1.9
1,315,288	+		ABI39_RS04690	0.77	-3.3
1,315,302	-		ABI39_RS04690	0.77	-2.7
1,315,332	+		ABI39_RS04690	0.79	-5.6
1,315,475	-		ABI39_RS04690	0.86	-2.7
1,315,553	+				-5.1
1,315,632	+				-6.0
1,315,694	-				-1.7
1,315,755	+				-4.5
1,315,759	+				-4.4
1,315,760	-				-0.3
1,315,760	-				-1.3
1,315,766	+				-1.6
1,315,767	-				-0.2
1,315,768	+				-4.2
1,316,028	+		ABI39_RS04695	0.49	-4.0
1,316,028	+		ABI39_RS04695	0.49	-3.5
1,316,029	-		ABI39_RS04695	0.49	-5.6
1,316,029	-		ABI39_RS04695	0.49	-3.6
1,316,030	+		ABI39_RS04695	0.49	-3.8
1,316,030	+		ABI39_RS04695	0.49	-3.0
1,316,196	-		ABI39_RS04695	0.80	-5.1
1,316,271	+				-3.8
1,316,271	+				-3.3
1,316,274	-				-3.8
1,316,274	-				-5.0
1,316,278	+				-5.3
1,316,279	-				-4.6
1,316,290	-				-4.1
1,316,322	+				-4.4
1,316,323	-				+0.3
1,316,494	-				+0.2
1,316,510	+				-4.0
1,316,537	-				+0.5
1,316,591	+		ABI39_RS04700	0.12	-4.4
1,316,616	+		ABI39_RS04700	0.13	-2.4
1,316,714	-		ABI39_RS04700	0.17	-0.2
1,316,907	+		ABI39_RS04700	0.25	-0.9
1,317,289	-		ABI39_RS04700	0.41	-0.2