Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS07045

Experiment: Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)
1,945,194	-				-0.6
1,945,194	-				-0.3
1,945,198	-				-0.1
1,945,198	-				-1.1
1,945,198	-				+0.0
1,945,202	-				+0.1
1,945,218	-				+0.2
1,945,245	-				+0.0
1,945,914	+		ABI39_RS07045	0.13	+0.4
1,945,914	+		ABI39_RS07045	0.13	+1.9
1,945,943	-		ABI39_RS07045	0.18	+0.6
1,946,165	+		ABI39_RS07045	0.61	+0.2
1,946,263	-		ABI39_RS07045	0.80	+0.4
1,946,347	+				+0.2
1,946,348	-				+0.3
1,946,380	-				+0.0
1,946,387	-				-0.2