Strain Fitness in Phocaeicola dorei CL03T12C01 around ABI39_RS07515

Experiment: Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C)
2,041,857	-				-0.6
2,041,865	-				-1.6
2,042,066	+		ABI39_RS07505	0.27	+0.7
2,042,066	+		ABI39_RS07505	0.27	-0.3
2,042,080	-		ABI39_RS07505	0.30	-0.0
2,042,206	+		ABI39_RS07505	0.65	-0.5
2,042,332	+				+0.5
2,042,336	+				+0.3
2,042,611	-		ABI39_RS07510	0.78	-0.0
2,042,802	-				+0.2
2,042,830	+				+0.0
2,042,856	+				+0.3
2,042,857	-				+0.4
2,042,865	+				-0.2
2,042,865	+				-0.7
2,043,191	-		ABI39_RS07515	0.42	+0.9
2,043,192	+		ABI39_RS07515	0.42	+1.0
2,043,740	+				+0.3
2,043,775	-				+0.4
2,043,775	-				-0.9
2,043,778	+				-0.4
2,043,779	-				+0.4
2,043,791	+				-0.9
2,043,792	-				+0.9
2,043,974	+				+0.4
2,044,073	+				+0.7
2,044,073	+				+0.2
2,044,522	-				+0.4
2,044,525	+				+0.4
2,044,525	+				-0.5
2,044,525	+				+0.1
2,044,541	-				-0.4
2,044,614	+				+0.5
2,044,616	+				+0.4
2,044,704	+				+0.2
2,044,711	-				-1.2