Strain Fitness in Escherichia coli ECRC98 around JDDGAC_11390

Experiment: Control_ECRC98

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECRC98
2,058,543	+	rhsA	JDDGAC_11380	0.63	-0.2
2,058,619	-	rhsA	JDDGAC_11380	0.69	-0.3
2,058,619	-	rhsA	JDDGAC_11380	0.69	-0.1
2,058,621	-	rhsA	JDDGAC_11380	0.69	+1.5
2,058,771	-	rhsA	JDDGAC_11380	0.80	+0.6
2,058,804	+	rhsA	JDDGAC_11380	0.82	+0.3
2,058,829	-	rhsA	JDDGAC_11380	0.84	+0.9
2,058,912	-				-0.6
2,059,117	+		JDDGAC_11385	0.24	+0.7
2,059,294	-				-0.7
2,059,637	+	tnp-ISAs1	JDDGAC_11390	0.12	-1.4
2,060,350	-	tnp-ISAs1	JDDGAC_11390	0.75	-2.5
2,060,598	+				-1.6
2,060,672	+				-0.0
2,060,710	+				+1.5
2,060,812	-				-0.9
2,060,815	+				+0.4
2,060,815	+				+0.0
2,060,815	+				+1.1
2,060,815	+				+1.3
2,060,815	+				-1.3
2,060,816	-				-0.7
2,060,816	-				+0.1
2,060,854	+				+0.3
2,060,857	+				-2.4
2,060,860	-				-0.9
2,060,860	-				-0.3
2,060,946	-				+0.4
2,061,027	-				+1.6
2,061,079	+				+0.1
2,061,121	-				+0.1
2,061,199	+	nrfB	JDDGAC_11395	0.13	+0.4
2,061,200	-	nrfB	JDDGAC_11395	0.13	+0.2
2,061,204	+	nrfB	JDDGAC_11395	0.13	-0.6
2,061,205	-	nrfB	JDDGAC_11395	0.14	+0.6
2,061,205	-	nrfB	JDDGAC_11395	0.14	-1.2
2,061,396	+	nrfB	JDDGAC_11395	0.22	-0.3
2,061,465	+	nrfB	JDDGAC_11395	0.25	+0.2
2,061,491	-	nrfB	JDDGAC_11395	0.26	-0.4
2,061,533	-	nrfB	JDDGAC_11395	0.28	-1.9
2,061,533	-	nrfB	JDDGAC_11395	0.28	-0.2
2,061,533	-	nrfB	JDDGAC_11395	0.28	-0.3