Strain Fitness in Escherichia coli ECRC98 around JDDGAC_09510

Experiment: Bas37

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas37
1,687,532	-	amiD	JDDGAC_09500	0.45	-0.8
1,687,534	+	amiD	JDDGAC_09500	0.45	+1.1
1,687,535	-	amiD	JDDGAC_09500	0.45	+2.0
1,687,836	+	amiD	JDDGAC_09500	0.82	-0.9
1,687,837	-	amiD	JDDGAC_09500	0.82	-0.2
1,687,856	-	amiD	JDDGAC_09500	0.84	+0.6
1,688,031	+	ybjQ	JDDGAC_09505	0.15	+1.6
1,688,032	-	ybjQ	JDDGAC_09505	0.15	+1.1
1,688,142	+	ybjQ	JDDGAC_09505	0.49	+0.3
1,688,146	+	ybjQ	JDDGAC_09505	0.50	+1.4
1,688,147	-	ybjQ	JDDGAC_09505	0.50	+1.3
1,688,429	+				+1.2
1,688,430	-				-0.0
1,688,500	+				-0.0
1,688,501	-				+1.4
1,688,501	-				+2.0
1,688,544	-				+0.1
1,688,549	-				-0.6
1,688,588	-				-1.2
1,688,590	-				+2.3
1,688,814	-		JDDGAC_09510	0.16	-1.1
1,688,815	+		JDDGAC_09510	0.17	+0.1
1,688,816	-		JDDGAC_09510	0.17	+0.3
1,688,833	-		JDDGAC_09510	0.17	-1.4
1,689,286	+		JDDGAC_09510	0.43	-1.2
1,690,594	+				+0.7
1,690,608	+				+0.1
1,690,621	-				-1.5
1,690,659	+				+0.1
1,690,671	+				+0.6
1,690,673	+				-0.6
1,690,691	-				-0.1
1,690,691	-				-1.6
1,690,695	+				+0.0
1,690,700	-				-1.2
1,690,723	+				-0.6
1,690,725	+				-0.2
1,690,726	-				-0.4
1,690,726	-				-1.9
1,690,752	-				-1.5
1,690,957	+				+0.2
1,690,957	+				+0.3
1,690,967	+				+0.3
1,690,968	-				-1.9
1,691,017	-	ybjP	JDDGAC_09515	0.15	+0.6
1,691,162	-	ybjP	JDDGAC_09515	0.43	+0.9
1,691,166	-	ybjP	JDDGAC_09515	0.44	+0.5
1,691,186	+	ybjP	JDDGAC_09515	0.47	+0.3
1,691,187	-	ybjP	JDDGAC_09515	0.48	-0.7
1,691,203	+	ybjP	JDDGAC_09515	0.51	-0.8