Experiment: Time0_glycerolstock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_10755 and HUW76_10760 are separated by 19 nucleotides HUW76_10760 and HUW76_10765 are separated by 1 nucleotides HUW76_10765 and HUW76_10770 overlap by 4 nucleotides
HUW76_10755: HUW76_10755 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE, at 2,261,031 to 2,262,398
_10755
HUW76_10760: HUW76_10760 - KH domain-containing protein, at 2,262,418 to 2,263,155
_10760
HUW76_10765: HUW76_10765 - membrane protein insertase YidC, at 2,263,157 to 2,263,762
_10765
HUW76_10770: HUW76_10770 - membrane protein insertion efficiency factor YidD, at 2,263,759 to 2,264,007
_10770
Position (kb)
2263
2264 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2262.401 kb on + strand at 2262.409 kb on - strand at 2262.409 kb on - strand at 2262.446 kb on - strand at 2262.446 kb on - strand at 2262.446 kb on - strand at 2262.448 kb on - strand at 2262.456 kb on - strand at 2262.456 kb on - strand at 2262.473 kb on - strand at 2262.473 kb on - strand at 2262.483 kb on - strand at 2262.488 kb on - strand at 2262.544 kb on - strand, within HUW76_10760 at 2262.551 kb on - strand, within HUW76_10760 at 2262.604 kb on - strand, within HUW76_10760 at 2262.689 kb on - strand, within HUW76_10760 at 2262.689 kb on - strand, within HUW76_10760 at 2262.732 kb on - strand, within HUW76_10760 at 2262.732 kb on - strand, within HUW76_10760 at 2262.738 kb on - strand, within HUW76_10760 at 2262.773 kb on - strand, within HUW76_10760 at 2262.773 kb on - strand, within HUW76_10760 at 2263.001 kb on - strand, within HUW76_10760 at 2263.001 kb on - strand, within HUW76_10760 at 2263.001 kb on - strand, within HUW76_10760 at 2263.002 kb on - strand, within HUW76_10760 at 2263.002 kb on - strand, within HUW76_10760 at 2263.002 kb on - strand, within HUW76_10760 at 2263.012 kb on - strand, within HUW76_10760 at 2263.012 kb on - strand, within HUW76_10760 at 2263.012 kb on - strand, within HUW76_10760 at 2263.012 kb on - strand, within HUW76_10760 at 2263.012 kb on - strand, within HUW76_10760 at 2263.012 kb on - strand, within HUW76_10760 at 2263.012 kb on - strand, within HUW76_10760 at 2263.043 kb on - strand, within HUW76_10760 at 2263.043 kb on - strand, within HUW76_10760 at 2263.085 kb on - strand at 2263.085 kb on - strand at 2263.164 kb on - strand at 2263.207 kb on - strand at 2263.207 kb on - strand at 2263.811 kb on - strand, within HUW76_10770 at 2263.816 kb on - strand, within HUW76_10770 at 2263.816 kb on - strand, within HUW76_10770 at 2263.816 kb on - strand, within HUW76_10770 at 2263.816 kb on - strand, within HUW76_10770 at 2263.868 kb on - strand, within HUW76_10770 at 2263.907 kb on - strand, within HUW76_10770 at 2263.907 kb on - strand, within HUW76_10770 at 2263.907 kb on - strand, within HUW76_10770 at 2263.907 kb on - strand, within HUW76_10770 at 2263.907 kb on - strand, within HUW76_10770 at 2263.907 kb on - strand, within HUW76_10770 at 2263.907 kb on - strand, within HUW76_10770 at 2263.914 kb on - strand, within HUW76_10770 at 2263.914 kb on - strand, within HUW76_10770 at 2263.919 kb on - strand, within HUW76_10770 at 2263.919 kb on - strand, within HUW76_10770 at 2263.919 kb on - strand, within HUW76_10770 at 2263.919 kb on - strand, within HUW76_10770 at 2263.919 kb on - strand, within HUW76_10770 at 2263.919 kb on - strand, within HUW76_10770 at 2263.919 kb on - strand, within HUW76_10770
Per-strain Table
Position Strand Gene LocusTag Fraction Time0_glycerolstock remove 2,262,401 + -0.2 2,262,409 - +3.7 2,262,409 - +3.0 2,262,446 - +1.5 2,262,446 - +1.7 2,262,446 - +1.5 2,262,448 - +2.0 2,262,456 - -0.1 2,262,456 - +3.0 2,262,473 - +2.4 2,262,473 - +1.6 2,262,483 - +1.0 2,262,488 - +1.5 2,262,544 - HUW76_10760 0.17 +1.7 2,262,551 - HUW76_10760 0.18 +1.5 2,262,604 - HUW76_10760 0.25 +2.0 2,262,689 - HUW76_10760 0.37 +1.3 2,262,689 - HUW76_10760 0.37 +1.7 2,262,732 - HUW76_10760 0.43 +0.6 2,262,732 - HUW76_10760 0.43 +1.2 2,262,738 - HUW76_10760 0.43 +1.4 2,262,773 - HUW76_10760 0.48 +1.1 2,262,773 - HUW76_10760 0.48 +1.9 2,263,001 - HUW76_10760 0.79 +0.9 2,263,001 - HUW76_10760 0.79 +1.1 2,263,001 - HUW76_10760 0.79 +1.3 2,263,002 - HUW76_10760 0.79 +1.6 2,263,002 - HUW76_10760 0.79 +0.8 2,263,002 - HUW76_10760 0.79 +1.1 2,263,012 - HUW76_10760 0.80 +0.2 2,263,012 - HUW76_10760 0.80 +1.7 2,263,012 - HUW76_10760 0.80 +1.3 2,263,012 - HUW76_10760 0.80 +1.3 2,263,012 - HUW76_10760 0.80 +1.6 2,263,012 - HUW76_10760 0.80 +1.1 2,263,012 - HUW76_10760 0.80 +1.1 2,263,043 - HUW76_10760 0.85 +1.5 2,263,043 - HUW76_10760 0.85 +1.3 2,263,085 - +1.4 2,263,085 - +1.7 2,263,164 - +1.7 2,263,207 - -0.7 2,263,207 - -0.3 2,263,811 - HUW76_10770 0.21 +0.4 2,263,816 - HUW76_10770 0.23 -0.8 2,263,816 - HUW76_10770 0.23 -1.2 2,263,816 - HUW76_10770 0.23 +0.4 2,263,816 - HUW76_10770 0.23 -0.4 2,263,868 - HUW76_10770 0.44 +0.4 2,263,907 - HUW76_10770 0.59 -0.2 2,263,907 - HUW76_10770 0.59 +0.6 2,263,907 - HUW76_10770 0.59 +0.2 2,263,907 - HUW76_10770 0.59 +0.3 2,263,907 - HUW76_10770 0.59 +0.1 2,263,907 - HUW76_10770 0.59 +1.7 2,263,907 - HUW76_10770 0.59 +1.4 2,263,914 - HUW76_10770 0.62 +0.2 2,263,914 - HUW76_10770 0.62 -0.1 2,263,919 - HUW76_10770 0.64 +0.5 2,263,919 - HUW76_10770 0.64 +0.1 2,263,919 - HUW76_10770 0.64 -0.2 2,263,919 - HUW76_10770 0.64 +0.8 2,263,919 - HUW76_10770 0.64 -0.6 2,263,919 - HUW76_10770 0.64 -1.0 2,263,919 - HUW76_10770 0.64 -1.7
Or see this region's nucleotide sequence