Strain Fitness in Fusobacterium nucleatum SB010 around HUW76_08460

Experiment: Time0_glycerolstock

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Time0_glycerolstock
1,772,700	-		HUW76_08455	0.37	-0.1
1,772,700	-		HUW76_08455	0.37	-0.4
1,772,714	+		HUW76_08455	0.38	+0.1
1,772,714	-		HUW76_08455	0.38	-0.8
1,772,714	-		HUW76_08455	0.38	-1.1
1,772,714	-		HUW76_08455	0.38	-0.5
1,772,779	-		HUW76_08455	0.45	+2.7
1,772,791	-		HUW76_08455	0.46	+1.0
1,772,791	-		HUW76_08455	0.46	-0.3
1,772,809	+		HUW76_08455	0.48	-0.1
1,772,885	+		HUW76_08455	0.57	+0.4
1,772,885	+		HUW76_08455	0.57	-0.6
1,772,924	+		HUW76_08455	0.61	+0.4
1,772,924	+		HUW76_08455	0.61	+0.2
1,772,924	+		HUW76_08455	0.61	+0.3
1,772,924	+		HUW76_08455	0.61	-1.9
1,772,924	+		HUW76_08455	0.61	+0.1
1,772,924	+		HUW76_08455	0.61	+0.1
1,772,932	-		HUW76_08455	0.62	+0.9
1,772,932	-		HUW76_08455	0.62	+0.7
1,772,932	-		HUW76_08455	0.62	+0.7
1,772,932	-		HUW76_08455	0.62	+0.7
1,772,950	+		HUW76_08455	0.64	-1.1
1,772,950	+		HUW76_08455	0.64	+0.2
1,772,958	-		HUW76_08455	0.65	-0.8
1,772,958	-		HUW76_08455	0.65	+2.2
1,772,972	+		HUW76_08455	0.66	+0.1
1,772,972	+		HUW76_08455	0.66	+0.2
1,772,974	+		HUW76_08455	0.66	+0.1
1,772,974	+		HUW76_08455	0.66	+0.0
1,772,974	+		HUW76_08455	0.66	-0.1
1,772,980	-		HUW76_08455	0.67	+0.3
1,772,980	-		HUW76_08455	0.67	+0.6
1,772,982	-		HUW76_08455	0.67	+3.1
1,772,982	-		HUW76_08455	0.67	+1.8
1,772,982	-		HUW76_08455	0.67	+1.0
1,772,986	-		HUW76_08455	0.68	-2.1
1,772,986	-		HUW76_08455	0.68	+2.7
1,773,096	+		HUW76_08455	0.80	-0.5
1,773,096	+		HUW76_08455	0.80	-0.4
1,773,096	+		HUW76_08455	0.80	-0.3
1,773,104	-		HUW76_08455	0.80	+0.4
1,773,104	-		HUW76_08455	0.80	+0.1
1,773,120	+		HUW76_08455	0.82	-0.6
1,773,128	-		HUW76_08455	0.83	+2.0
1,773,166	-		HUW76_08455	0.87	+1.0
1,773,226	-				+1.7
1,773,226	-				+0.3
1,773,226	-				+0.3
1,773,226	-				+1.0
1,773,233	-				+0.3
1,773,239	+				-0.1
1,773,239	+				-0.2
1,773,239	+				-0.5
1,773,240	-				-0.5
1,773,240	-				+0.7
1,773,251	+				+0.8
1,773,251	+				+1.6
1,773,256	+				+0.6
1,773,347	+				-0.5
1,773,355	-				+1.7
1,773,355	-				+1.2
1,773,355	-				+0.1
1,773,367	-				+2.7
1,773,367	-				+2.6
1,773,388	-				+1.4
1,773,393	+				-0.7
1,773,393	+				-0.8
1,773,393	+				+0.0
1,773,401	-				+1.1
1,773,609	+				+0.3
1,773,712	+				+0.3
1,773,719	-				+1.2
1,773,720	-				-0.1
1,773,757	-				-0.8
1,773,757	-				-1.5
1,773,822	-		HUW76_08460	0.17	+0.0
1,773,822	-		HUW76_08460	0.17	-0.4
1,773,879	-		HUW76_08460	0.24	+0.3
1,773,900	+		HUW76_08460	0.27	+0.1
1,773,951	+		HUW76_08460	0.34	+0.0
1,773,951	+		HUW76_08460	0.34	-0.2
1,773,959	-		HUW76_08460	0.35	-0.6
1,773,959	-		HUW76_08460	0.35	-0.3
1,773,960	+		HUW76_08460	0.35	+0.3
1,773,960	+		HUW76_08460	0.35	-1.0
1,773,960	+		HUW76_08460	0.35	+0.0
1,773,960	+		HUW76_08460	0.35	+0.3
1,773,960	+		HUW76_08460	0.35	-1.5
1,773,987	+		HUW76_08460	0.38	-0.7
1,773,987	+		HUW76_08460	0.38	+0.1
1,773,995	-		HUW76_08460	0.39	-1.0
1,773,995	-		HUW76_08460	0.39	-0.5
1,773,995	-		HUW76_08460	0.39	+0.7
1,773,998	+		HUW76_08460	0.40	-0.6
1,773,998	+		HUW76_08460	0.40	+0.8
1,773,998	+		HUW76_08460	0.40	-0.3
1,773,998	+		HUW76_08460	0.40	+1.5
1,774,005	-		HUW76_08460	0.41	+0.5
1,774,006	-		HUW76_08460	0.41	-0.3
1,774,006	-		HUW76_08460	0.41	-2.4
1,774,018	-		HUW76_08460	0.42	-0.5
1,774,024	-		HUW76_08460	0.43	-0.4
1,774,034	+		HUW76_08460	0.44	+1.2
1,774,034	+		HUW76_08460	0.44	-0.5
1,774,041	-		HUW76_08460	0.45	-0.9
1,774,074	-		HUW76_08460	0.49	+0.1
1,774,074	-		HUW76_08460	0.49	+1.0
1,774,097	+		HUW76_08460	0.52	+0.2
1,774,109	+		HUW76_08460	0.54	-0.5
1,774,109	+		HUW76_08460	0.54	-0.0
1,774,109	+		HUW76_08460	0.54	-0.5
1,774,109	+		HUW76_08460	0.54	-0.7
1,774,109	+		HUW76_08460	0.54	-0.2
1,774,109	+		HUW76_08460	0.54	+0.1
1,774,109	+		HUW76_08460	0.54	-1.2
1,774,109	+		HUW76_08460	0.54	+0.4
1,774,109	+		HUW76_08460	0.54	-0.2
1,774,109	+		HUW76_08460	0.54	-0.5
1,774,109	+		HUW76_08460	0.54	-0.3
1,774,117	-		HUW76_08460	0.55	+1.3
1,774,117	-		HUW76_08460	0.55	+0.1
1,774,117	-		HUW76_08460	0.55	-0.4
1,774,117	-		HUW76_08460	0.55	+0.1
1,774,117	-		HUW76_08460	0.55	+0.5
1,774,117	-		HUW76_08460	0.55	+0.7
1,774,130	+		HUW76_08460	0.57	+0.0
1,774,130	+		HUW76_08460	0.57	-1.2
1,774,150	+		HUW76_08460	0.59	+0.2
1,774,150	+		HUW76_08460	0.59	-0.8
1,774,186	+		HUW76_08460	0.64	+0.5
1,774,186	+		HUW76_08460	0.64	+0.8
1,774,222	+		HUW76_08460	0.69	+0.3
1,774,222	+		HUW76_08460	0.69	+0.9
1,774,223	+		HUW76_08460	0.69	-1.5
1,774,223	+		HUW76_08460	0.69	+0.1
1,774,223	+		HUW76_08460	0.69	+0.3
1,774,223	+		HUW76_08460	0.69	-2.2
1,774,231	-		HUW76_08460	0.70	+0.1
1,774,231	-		HUW76_08460	0.70	-0.5
1,774,231	-		HUW76_08460	0.70	+0.3
1,774,231	-		HUW76_08460	0.70	+0.2
1,774,231	-		HUW76_08460	0.70	-0.1
1,774,231	-		HUW76_08460	0.70	+0.1
1,774,239	+		HUW76_08460	0.71	+0.2
1,774,275	+		HUW76_08460	0.75	-0.9
1,774,275	+		HUW76_08460	0.75	-0.9
1,774,283	+		HUW76_08460	0.76	-0.4
1,774,283	+		HUW76_08460	0.76	-0.7
1,774,283	-		HUW76_08460	0.76	-0.1
1,774,291	-		HUW76_08460	0.78	+1.6
1,774,291	-		HUW76_08460	0.78	+4.3
1,774,292	+		HUW76_08460	0.78	-0.6
1,774,292	+		HUW76_08460	0.78	+0.0
1,774,375	+		HUW76_08460	0.88	+0.2
1,774,383	-		HUW76_08460	0.89	-0.2
1,774,383	-		HUW76_08460	0.89	-0.5
1,774,385	+		HUW76_08460	0.90	-0.1
1,774,385	+		HUW76_08460	0.90	+0.5
1,774,385	+		HUW76_08460	0.90	-0.2
1,774,385	+		HUW76_08460	0.90	+0.3
1,774,385	+		HUW76_08460	0.90	-0.1
1,774,385	+		HUW76_08460	0.90	+0.1
1,774,385	+		HUW76_08460	0.90	-1.1
1,774,385	+		HUW76_08460	0.90	-0.1
1,774,393	-				+0.2
1,774,393	-				+0.3
1,774,393	-				+0.7
1,774,393	-				-0.2
1,774,393	-				+0.0
1,774,393	-				+0.4
1,774,433	+				+0.6
1,774,441	-				+0.2
1,774,441	-				-0.2
1,774,441	-				+0.6
1,774,501	+				-0.1
1,774,506	+				-0.7
1,774,506	+				-1.3
1,774,536	-				+1.0
1,774,542	+				-0.2
1,774,542	+				-0.2
1,774,593	-		HUW76_08465	0.14	+1.3
1,774,593	-		HUW76_08465	0.14	+1.3
1,774,613	-		HUW76_08465	0.16	+0.2
1,774,621	+		HUW76_08465	0.17	-1.1
1,774,622	+		HUW76_08465	0.17	-0.2
1,774,778	-		HUW76_08465	0.33	+0.1
1,774,853	+		HUW76_08465	0.40	-0.4
1,774,853	+		HUW76_08465	0.40	+0.3
1,774,878	-		HUW76_08465	0.42	+0.8
1,774,878	-		HUW76_08465	0.42	+0.0
1,774,887	+		HUW76_08465	0.43	+0.1
1,774,887	+		HUW76_08465	0.43	-0.6
1,774,887	+		HUW76_08465	0.43	-0.8
1,774,958	+		HUW76_08465	0.50	-0.2
1,774,958	+		HUW76_08465	0.50	+0.1
1,774,968	-		HUW76_08465	0.51	+0.1
1,774,978	+		HUW76_08465	0.52	-0.4
1,774,978	+		HUW76_08465	0.52	-0.4
1,774,978	+		HUW76_08465	0.52	-0.7
1,774,983	-		HUW76_08465	0.53	+0.9
1,775,021	-		HUW76_08465	0.57	+0.2
1,775,031	-		HUW76_08465	0.58	+0.9
1,775,031	-		HUW76_08465	0.58	+1.1
1,775,055	+		HUW76_08465	0.60	-0.1
1,775,082	+		HUW76_08465	0.63	-0.6
1,775,090	+		HUW76_08465	0.64	-0.1
1,775,120	+		HUW76_08465	0.67	+0.2
1,775,120	+		HUW76_08465	0.67	+1.3
1,775,120	+		HUW76_08465	0.67	+0.1
1,775,120	+		HUW76_08465	0.67	-2.1
1,775,178	+		HUW76_08465	0.72	-0.9
1,775,178	+		HUW76_08465	0.72	-1.0
1,775,210	+		HUW76_08465	0.76	-0.3
1,775,210	+		HUW76_08465	0.76	+0.1
1,775,211	+		HUW76_08465	0.76	-0.2
1,775,213	+		HUW76_08465	0.76	-0.0
1,775,221	-		HUW76_08465	0.77	+1.5
1,775,221	-		HUW76_08465	0.77	-0.2
1,775,234	+		HUW76_08465	0.78	+0.1
1,775,323	-		HUW76_08465	0.87	-0.1
1,775,349	-		HUW76_08465	0.89	+0.9
1,775,349	-		HUW76_08465	0.89	+0.2
1,775,349	-		HUW76_08465	0.89	-0.0
1,775,349	-		HUW76_08465	0.89	+1.4
1,775,351	-		HUW76_08465	0.90	+0.1
1,775,370	-				+0.3
1,775,370	-				-0.2
1,775,390	-				+0.1
1,775,390	-				+0.9