Experiment: Time0_glycerolstock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_07510 and HUW76_07515 are separated by 156 nucleotides HUW76_07515 and HUW76_07520 are separated by 297 nucleotides
HUW76_07510: HUW76_07510 - 2-hydroxyacid dehydrogenase, at 1,569,100 to 1,570,103
_07510
HUW76_07515: HUW76_07515 - patatin-like phospholipase family protein, at 1,570,260 to 1,571,102
_07515
HUW76_07520: HUW76_07520 - arginine--tRNA ligase, at 1,571,400 to 1,573,109
_07520
Position (kb)
1570
1571
1572 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1569.265 kb on - strand, within HUW76_07510 at 1569.265 kb on - strand, within HUW76_07510 at 1569.352 kb on + strand, within HUW76_07510 at 1569.392 kb on - strand, within HUW76_07510 at 1569.434 kb on + strand, within HUW76_07510 at 1569.577 kb on - strand, within HUW76_07510 at 1569.590 kb on - strand, within HUW76_07510 at 1569.590 kb on - strand, within HUW76_07510 at 1569.596 kb on + strand, within HUW76_07510 at 1569.623 kb on + strand, within HUW76_07510 at 1569.681 kb on + strand, within HUW76_07510 at 1569.681 kb on + strand, within HUW76_07510 at 1569.713 kb on + strand, within HUW76_07510 at 1569.723 kb on + strand, within HUW76_07510 at 1569.723 kb on + strand, within HUW76_07510 at 1569.723 kb on + strand, within HUW76_07510 at 1569.723 kb on + strand, within HUW76_07510 at 1569.723 kb on - strand, within HUW76_07510 at 1569.723 kb on - strand, within HUW76_07510 at 1569.731 kb on - strand, within HUW76_07510 at 1569.731 kb on - strand, within HUW76_07510 at 1569.731 kb on - strand, within HUW76_07510 at 1569.731 kb on - strand, within HUW76_07510 at 1569.764 kb on + strand, within HUW76_07510 at 1569.772 kb on - strand, within HUW76_07510 at 1569.774 kb on + strand, within HUW76_07510 at 1569.774 kb on + strand, within HUW76_07510 at 1569.774 kb on + strand, within HUW76_07510 at 1569.780 kb on - strand, within HUW76_07510 at 1569.781 kb on + strand, within HUW76_07510 at 1569.781 kb on + strand, within HUW76_07510 at 1569.786 kb on + strand, within HUW76_07510 at 1569.794 kb on - strand, within HUW76_07510 at 1569.794 kb on - strand, within HUW76_07510 at 1569.826 kb on - strand, within HUW76_07510 at 1569.834 kb on - strand, within HUW76_07510 at 1569.855 kb on + strand, within HUW76_07510 at 1569.860 kb on + strand, within HUW76_07510 at 1569.878 kb on - strand, within HUW76_07510 at 1569.953 kb on - strand, within HUW76_07510 at 1569.953 kb on - strand, within HUW76_07510 at 1569.954 kb on - strand, within HUW76_07510 at 1569.954 kb on - strand, within HUW76_07510 at 1569.965 kb on - strand, within HUW76_07510 at 1569.965 kb on - strand, within HUW76_07510 at 1569.966 kb on - strand, within HUW76_07510 at 1569.966 kb on - strand, within HUW76_07510 at 1570.200 kb on + strand at 1570.200 kb on + strand at 1570.230 kb on - strand at 1570.230 kb on - strand at 1570.269 kb on + strand at 1570.309 kb on + strand at 1570.319 kb on + strand at 1570.357 kb on + strand, within HUW76_07515 at 1570.357 kb on + strand, within HUW76_07515 at 1570.380 kb on + strand, within HUW76_07515 at 1570.380 kb on + strand, within HUW76_07515 at 1570.667 kb on - strand, within HUW76_07515 at 1570.680 kb on + strand, within HUW76_07515 at 1570.680 kb on + strand, within HUW76_07515 at 1570.680 kb on + strand, within HUW76_07515 at 1570.688 kb on - strand, within HUW76_07515 at 1570.692 kb on + strand, within HUW76_07515 at 1570.692 kb on + strand, within HUW76_07515 at 1570.692 kb on + strand, within HUW76_07515 at 1570.773 kb on + strand, within HUW76_07515 at 1570.773 kb on + strand, within HUW76_07515 at 1570.774 kb on + strand, within HUW76_07515 at 1570.774 kb on + strand, within HUW76_07515 at 1570.781 kb on - strand, within HUW76_07515 at 1570.822 kb on + strand, within HUW76_07515 at 1570.893 kb on + strand, within HUW76_07515 at 1570.893 kb on + strand, within HUW76_07515 at 1570.911 kb on + strand, within HUW76_07515 at 1570.913 kb on - strand, within HUW76_07515 at 1570.919 kb on - strand, within HUW76_07515 at 1570.919 kb on - strand, within HUW76_07515 at 1570.919 kb on - strand, within HUW76_07515 at 1571.019 kb on + strand at 1571.048 kb on + strand at 1571.051 kb on + strand at 1571.051 kb on + strand at 1571.051 kb on + strand at 1571.053 kb on + strand at 1571.053 kb on + strand at 1571.053 kb on + strand at 1571.053 kb on + strand at 1571.053 kb on + strand at 1571.053 kb on + strand at 1571.053 kb on + strand at 1571.061 kb on - strand at 1571.061 kb on - strand at 1571.061 kb on - strand at 1571.061 kb on - strand at 1571.061 kb on - strand at 1571.185 kb on + strand at 1571.213 kb on + strand at 1571.321 kb on + strand at 1571.324 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Time0_glycerolstock remove 1,569,265 - HUW76_07510 0.16 +0.8 1,569,265 - HUW76_07510 0.16 +2.5 1,569,352 + HUW76_07510 0.25 +2.6 1,569,392 - HUW76_07510 0.29 +1.0 1,569,434 + HUW76_07510 0.33 +3.4 1,569,577 - HUW76_07510 0.48 +0.3 1,569,590 - HUW76_07510 0.49 +1.3 1,569,590 - HUW76_07510 0.49 +1.6 1,569,596 + HUW76_07510 0.49 -0.4 1,569,623 + HUW76_07510 0.52 +1.3 1,569,681 + HUW76_07510 0.58 +1.9 1,569,681 + HUW76_07510 0.58 +1.0 1,569,713 + HUW76_07510 0.61 +0.4 1,569,723 + HUW76_07510 0.62 +1.6 1,569,723 + HUW76_07510 0.62 +0.8 1,569,723 + HUW76_07510 0.62 +1.3 1,569,723 + HUW76_07510 0.62 +0.4 1,569,723 - HUW76_07510 0.62 +1.3 1,569,723 - HUW76_07510 0.62 +1.2 1,569,731 - HUW76_07510 0.63 -0.0 1,569,731 - HUW76_07510 0.63 +0.9 1,569,731 - HUW76_07510 0.63 -0.3 1,569,731 - HUW76_07510 0.63 +0.9 1,569,764 + HUW76_07510 0.66 +1.7 1,569,772 - HUW76_07510 0.67 -1.2 1,569,774 + HUW76_07510 0.67 -1.1 1,569,774 + HUW76_07510 0.67 +0.6 1,569,774 + HUW76_07510 0.67 +0.8 1,569,780 - HUW76_07510 0.68 +1.0 1,569,781 + HUW76_07510 0.68 +0.7 1,569,781 + HUW76_07510 0.68 +0.4 1,569,786 + HUW76_07510 0.68 +0.5 1,569,794 - HUW76_07510 0.69 +0.3 1,569,794 - HUW76_07510 0.69 +1.3 1,569,826 - HUW76_07510 0.72 +0.4 1,569,834 - HUW76_07510 0.73 +0.9 1,569,855 + HUW76_07510 0.75 +0.9 1,569,860 + HUW76_07510 0.76 +1.0 1,569,878 - HUW76_07510 0.77 +0.7 1,569,953 - HUW76_07510 0.85 +1.5 1,569,953 - HUW76_07510 0.85 +1.4 1,569,954 - HUW76_07510 0.85 +0.6 1,569,954 - HUW76_07510 0.85 -0.3 1,569,965 - HUW76_07510 0.86 +0.9 1,569,965 - HUW76_07510 0.86 +1.8 1,569,966 - HUW76_07510 0.86 +0.8 1,569,966 - HUW76_07510 0.86 +0.6 1,570,200 + -1.3 1,570,200 + -0.3 1,570,230 - -1.1 1,570,230 - -0.8 1,570,269 + -0.3 1,570,309 + -0.6 1,570,319 + -0.2 1,570,357 + HUW76_07515 0.12 -0.1 1,570,357 + HUW76_07515 0.12 +1.3 1,570,380 + HUW76_07515 0.14 -0.5 1,570,380 + HUW76_07515 0.14 -0.8 1,570,667 - HUW76_07515 0.48 +0.6 1,570,680 + HUW76_07515 0.50 -0.7 1,570,680 + HUW76_07515 0.50 -0.8 1,570,680 + HUW76_07515 0.50 +0.9 1,570,688 - HUW76_07515 0.51 +2.5 1,570,692 + HUW76_07515 0.51 +0.1 1,570,692 + HUW76_07515 0.51 -0.2 1,570,692 + HUW76_07515 0.51 -0.5 1,570,773 + HUW76_07515 0.61 +0.1 1,570,773 + HUW76_07515 0.61 -0.7 1,570,774 + HUW76_07515 0.61 -0.6 1,570,774 + HUW76_07515 0.61 -0.7 1,570,781 - HUW76_07515 0.62 +0.8 1,570,822 + HUW76_07515 0.67 -0.1 1,570,893 + HUW76_07515 0.75 -0.9 1,570,893 + HUW76_07515 0.75 +0.2 1,570,911 + HUW76_07515 0.77 -0.4 1,570,913 - HUW76_07515 0.77 +1.1 1,570,919 - HUW76_07515 0.78 +0.3 1,570,919 - HUW76_07515 0.78 -0.4 1,570,919 - HUW76_07515 0.78 +1.7 1,571,019 + -0.3 1,571,048 + -0.6 1,571,051 + -0.8 1,571,051 + -0.1 1,571,051 + -0.2 1,571,053 + -0.1 1,571,053 + +0.4 1,571,053 + -0.1 1,571,053 + -0.9 1,571,053 + -0.1 1,571,053 + -0.4 1,571,053 + -0.2 1,571,061 - +2.4 1,571,061 - -1.5 1,571,061 - -0.6 1,571,061 - +1.2 1,571,061 - -1.8 1,571,185 + -0.4 1,571,213 + -0.6 1,571,321 + -0.6 1,571,324 + -0.4
Or see this region's nucleotide sequence