Experiment: Time0_glycerolstock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_10105 and HUW76_10110 are separated by 306 nucleotides HUW76_10110 and HUW76_10115 overlap by 4 nucleotides
HUW76_10105: HUW76_10105 - endolytic transglycosylase MltG, at 2,111,447 to 2,112,379
_10105
HUW76_10110: HUW76_10110 - tRNA lysidine(34) synthetase TilS, at 2,112,686 to 2,114,032
_10110
HUW76_10115: HUW76_10115 - ATP-dependent zinc metalloprotease FtsH, at 2,114,029 to 2,116,200
_10115
Position (kb)
2112
2113
2114
2115 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 2111.725 kb on + strand, within HUW76_10105 at 2111.725 kb on + strand, within HUW76_10105 at 2111.725 kb on + strand, within HUW76_10105 at 2111.725 kb on + strand, within HUW76_10105 at 2111.755 kb on + strand, within HUW76_10105 at 2111.975 kb on + strand, within HUW76_10105 at 2112.024 kb on + strand, within HUW76_10105 at 2112.024 kb on + strand, within HUW76_10105 at 2112.032 kb on + strand, within HUW76_10105 at 2112.032 kb on + strand, within HUW76_10105 at 2112.194 kb on + strand, within HUW76_10105 at 2112.194 kb on + strand, within HUW76_10105 at 2112.255 kb on + strand, within HUW76_10105 at 2112.255 kb on + strand, within HUW76_10105 at 2112.271 kb on + strand, within HUW76_10105 at 2112.271 kb on + strand, within HUW76_10105 at 2112.313 kb on + strand at 2112.516 kb on + strand at 2112.548 kb on + strand at 2114.013 kb on + strand at 2114.013 kb on + strand at 2114.076 kb on + strand at 2114.261 kb on - strand, within HUW76_10115 at 2114.288 kb on + strand, within HUW76_10115 at 2114.288 kb on + strand, within HUW76_10115 at 2114.335 kb on + strand, within HUW76_10115 at 2114.429 kb on + strand, within HUW76_10115 at 2114.429 kb on + strand, within HUW76_10115 at 2114.501 kb on + strand, within HUW76_10115 at 2114.599 kb on + strand, within HUW76_10115 at 2114.678 kb on + strand, within HUW76_10115 at 2114.678 kb on + strand, within HUW76_10115 at 2114.678 kb on + strand, within HUW76_10115 at 2114.711 kb on + strand, within HUW76_10115 at 2114.725 kb on + strand, within HUW76_10115 at 2114.769 kb on + strand, within HUW76_10115 at 2114.778 kb on + strand, within HUW76_10115 at 2114.778 kb on + strand, within HUW76_10115 at 2114.778 kb on + strand, within HUW76_10115 at 2114.778 kb on + strand, within HUW76_10115 at 2114.778 kb on + strand, within HUW76_10115 at 2114.820 kb on + strand, within HUW76_10115 at 2114.884 kb on + strand, within HUW76_10115 at 2114.997 kb on + strand, within HUW76_10115 at 2114.997 kb on + strand, within HUW76_10115 at 2114.997 kb on + strand, within HUW76_10115 at 2114.997 kb on + strand, within HUW76_10115 at 2115.005 kb on - strand, within HUW76_10115 at 2115.006 kb on + strand, within HUW76_10115 at 2115.007 kb on + strand, within HUW76_10115 at 2115.007 kb on + strand, within HUW76_10115 at 2115.031 kb on + strand, within HUW76_10115
Per-strain Table
Position Strand Gene LocusTag Fraction Time0_glycerolstock remove 2,111,725 + HUW76_10105 0.30 -2.1 2,111,725 + HUW76_10105 0.30 -0.5 2,111,725 + HUW76_10105 0.30 +0.5 2,111,725 + HUW76_10105 0.30 -1.1 2,111,755 + HUW76_10105 0.33 -0.5 2,111,975 + HUW76_10105 0.57 -0.4 2,112,024 + HUW76_10105 0.62 -0.7 2,112,024 + HUW76_10105 0.62 +0.2 2,112,032 + HUW76_10105 0.63 +0.5 2,112,032 + HUW76_10105 0.63 -1.6 2,112,194 + HUW76_10105 0.80 -0.9 2,112,194 + HUW76_10105 0.80 -1.6 2,112,255 + HUW76_10105 0.87 -0.4 2,112,255 + HUW76_10105 0.87 -1.1 2,112,271 + HUW76_10105 0.88 -1.1 2,112,271 + HUW76_10105 0.88 +0.1 2,112,313 + -0.5 2,112,516 + -0.0 2,112,548 + -0.0 2,114,013 + -0.6 2,114,013 + +0.1 2,114,076 + +1.9 2,114,261 - HUW76_10115 0.11 +2.6 2,114,288 + HUW76_10115 0.12 +4.5 2,114,288 + HUW76_10115 0.12 +0.9 2,114,335 + HUW76_10115 0.14 +3.2 2,114,429 + HUW76_10115 0.18 +0.5 2,114,429 + HUW76_10115 0.18 +3.0 2,114,501 + HUW76_10115 0.22 +3.4 2,114,599 + HUW76_10115 0.26 +2.6 2,114,678 + HUW76_10115 0.30 +4.6 2,114,678 + HUW76_10115 0.30 +4.1 2,114,678 + HUW76_10115 0.30 +2.6 2,114,711 + HUW76_10115 0.31 +0.3 2,114,725 + HUW76_10115 0.32 +2.5 2,114,769 + HUW76_10115 0.34 +4.5 2,114,778 + HUW76_10115 0.34 +1.9 2,114,778 + HUW76_10115 0.34 +1.0 2,114,778 + HUW76_10115 0.34 +3.9 2,114,778 + HUW76_10115 0.34 +5.1 2,114,778 + HUW76_10115 0.34 +3.6 2,114,820 + HUW76_10115 0.36 +5.0 2,114,884 + HUW76_10115 0.39 +5.0 2,114,997 + HUW76_10115 0.45 +5.4 2,114,997 + HUW76_10115 0.45 +3.1 2,114,997 + HUW76_10115 0.45 +2.7 2,114,997 + HUW76_10115 0.45 +1.2 2,115,005 - HUW76_10115 0.45 +3.3 2,115,006 + HUW76_10115 0.45 +3.2 2,115,007 + HUW76_10115 0.45 +0.9 2,115,007 + HUW76_10115 0.45 +3.7 2,115,031 + HUW76_10115 0.46 +0.9
Or see this region's nucleotide sequence