Experiment: Time0_glycerolstock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_09325 and HUW76_09330 are separated by 5 nucleotides HUW76_09330 and HUW76_09335 are separated by 10 nucleotides HUW76_09335 and HUW76_09340 are separated by 9 nucleotides
HUW76_09325: HUW76_09325 - leucine--tRNA ligase, at 1,948,712 to 1,951,291
_09325
HUW76_09330: HUW76_09330 - sigma-70 family RNA polymerase sigma factor, at 1,951,297 to 1,951,911
_09330
HUW76_09335: HUW76_09335 - 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB, at 1,951,922 to 1,952,626
_09335
HUW76_09340: HUW76_09340 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 1,952,636 to 1,953,907
_09340
Position (kb)
1951
1952 Strain fitness (log2 ratio)
-2
-1
0
1 at 1951.390 kb on - strand, within HUW76_09330 at 1951.415 kb on - strand, within HUW76_09330 at 1951.417 kb on - strand, within HUW76_09330 at 1951.417 kb on - strand, within HUW76_09330 at 1951.423 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.596 kb on - strand, within HUW76_09330 at 1951.597 kb on - strand, within HUW76_09330 at 1951.597 kb on - strand, within HUW76_09330 at 1951.629 kb on - strand, within HUW76_09330 at 1951.629 kb on - strand, within HUW76_09330 at 1951.951 kb on - strand at 1951.951 kb on - strand at 1951.953 kb on - strand at 1951.953 kb on - strand at 1951.953 kb on - strand at 1951.953 kb on - strand at 1951.953 kb on - strand at 1951.956 kb on - strand at 1952.180 kb on - strand, within HUW76_09335 at 1952.180 kb on - strand, within HUW76_09335 at 1952.304 kb on - strand, within HUW76_09335 at 1952.304 kb on - strand, within HUW76_09335 at 1952.304 kb on - strand, within HUW76_09335 at 1952.352 kb on - strand, within HUW76_09335 at 1952.352 kb on - strand, within HUW76_09335 at 1952.396 kb on - strand, within HUW76_09335 at 1952.396 kb on - strand, within HUW76_09335 at 1952.407 kb on - strand, within HUW76_09335 at 1952.407 kb on - strand, within HUW76_09335 at 1952.435 kb on - strand, within HUW76_09335 at 1952.435 kb on - strand, within HUW76_09335 at 1952.445 kb on - strand, within HUW76_09335 at 1952.445 kb on - strand, within HUW76_09335 at 1952.445 kb on - strand, within HUW76_09335 at 1952.445 kb on - strand, within HUW76_09335 at 1952.480 kb on - strand, within HUW76_09335 at 1952.533 kb on - strand, within HUW76_09335 at 1952.540 kb on - strand, within HUW76_09335 at 1952.551 kb on - strand, within HUW76_09335 at 1952.551 kb on - strand, within HUW76_09335 at 1952.551 kb on - strand, within HUW76_09335 at 1952.551 kb on - strand, within HUW76_09335 at 1952.559 kb on - strand at 1952.619 kb on - strand at 1952.619 kb on - strand at 1952.619 kb on - strand at 1952.619 kb on - strand at 1952.619 kb on - strand at 1952.619 kb on - strand at 1952.619 kb on - strand at 1952.619 kb on - strand at 1952.642 kb on - strand at 1952.642 kb on - strand at 1952.642 kb on - strand at 1952.642 kb on - strand at 1952.642 kb on - strand at 1952.642 kb on - strand at 1952.642 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Time0_glycerolstock remove 1,951,390 - HUW76_09330 0.15 -0.1 1,951,415 - HUW76_09330 0.19 +0.1 1,951,417 - HUW76_09330 0.20 +0.0 1,951,417 - HUW76_09330 0.20 -0.1 1,951,423 - HUW76_09330 0.20 -0.4 1,951,596 - HUW76_09330 0.49 -0.8 1,951,596 - HUW76_09330 0.49 +0.1 1,951,596 - HUW76_09330 0.49 -0.1 1,951,596 - HUW76_09330 0.49 +0.2 1,951,596 - HUW76_09330 0.49 -0.0 1,951,596 - HUW76_09330 0.49 -0.1 1,951,596 - HUW76_09330 0.49 +0.4 1,951,596 - HUW76_09330 0.49 -0.2 1,951,596 - HUW76_09330 0.49 +0.4 1,951,596 - HUW76_09330 0.49 +0.2 1,951,596 - HUW76_09330 0.49 +0.2 1,951,596 - HUW76_09330 0.49 +0.7 1,951,596 - HUW76_09330 0.49 +0.3 1,951,596 - HUW76_09330 0.49 -0.3 1,951,596 - HUW76_09330 0.49 +0.5 1,951,596 - HUW76_09330 0.49 -0.0 1,951,596 - HUW76_09330 0.49 +0.7 1,951,596 - HUW76_09330 0.49 +0.7 1,951,596 - HUW76_09330 0.49 -0.7 1,951,596 - HUW76_09330 0.49 -0.3 1,951,596 - HUW76_09330 0.49 -0.2 1,951,596 - HUW76_09330 0.49 +0.4 1,951,596 - HUW76_09330 0.49 +0.5 1,951,596 - HUW76_09330 0.49 +0.4 1,951,596 - HUW76_09330 0.49 -0.4 1,951,596 - HUW76_09330 0.49 +0.2 1,951,596 - HUW76_09330 0.49 -0.3 1,951,597 - HUW76_09330 0.49 +0.5 1,951,597 - HUW76_09330 0.49 +0.3 1,951,629 - HUW76_09330 0.54 +0.2 1,951,629 - HUW76_09330 0.54 +0.3 1,951,951 - +0.2 1,951,951 - +0.6 1,951,953 - -0.7 1,951,953 - +0.3 1,951,953 - -0.3 1,951,953 - -0.8 1,951,953 - -1.8 1,951,956 - +0.2 1,952,180 - HUW76_09335 0.37 +0.3 1,952,180 - HUW76_09335 0.37 +0.3 1,952,304 - HUW76_09335 0.54 -1.0 1,952,304 - HUW76_09335 0.54 -0.5 1,952,304 - HUW76_09335 0.54 -0.3 1,952,352 - HUW76_09335 0.61 -0.1 1,952,352 - HUW76_09335 0.61 -0.6 1,952,396 - HUW76_09335 0.67 +0.6 1,952,396 - HUW76_09335 0.67 +0.9 1,952,407 - HUW76_09335 0.69 -0.5 1,952,407 - HUW76_09335 0.69 -1.0 1,952,435 - HUW76_09335 0.73 -1.2 1,952,435 - HUW76_09335 0.73 -0.2 1,952,445 - HUW76_09335 0.74 +1.0 1,952,445 - HUW76_09335 0.74 +0.3 1,952,445 - HUW76_09335 0.74 -0.9 1,952,445 - HUW76_09335 0.74 +0.7 1,952,480 - HUW76_09335 0.79 -0.1 1,952,533 - HUW76_09335 0.87 -0.7 1,952,540 - HUW76_09335 0.88 -0.1 1,952,551 - HUW76_09335 0.89 +0.5 1,952,551 - HUW76_09335 0.89 +0.7 1,952,551 - HUW76_09335 0.89 +0.1 1,952,551 - HUW76_09335 0.89 -0.0 1,952,559 - -0.4 1,952,619 - -0.6 1,952,619 - -0.4 1,952,619 - +0.2 1,952,619 - +0.5 1,952,619 - -0.3 1,952,619 - -0.3 1,952,619 - -0.4 1,952,619 - +0.1 1,952,642 - +0.7 1,952,642 - -1.6 1,952,642 - -0.4 1,952,642 - +0.3 1,952,642 - -0.0 1,952,642 - -0.1 1,952,642 - -0.7
Or see this region's nucleotide sequence