Experiment: Time0_glycerolstock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_07590 and HUW76_07595 are separated by 23 nucleotides HUW76_07595 and HUW76_07600 are separated by 25 nucleotides HUW76_07600 and HUW76_07605 are separated by 376 nucleotides
HUW76_07590: HUW76_07590 - DUF368 domain-containing protein, at 1,592,042 to 1,592,818
_07590
HUW76_07595: HUW76_07595 - prolipoprotein diacylglyceryl transferase, at 1,592,842 to 1,593,729
_07595
HUW76_07600: HUW76_07600 - Glu/Leu/Phe/Val dehydrogenase, at 1,593,755 to 1,595,017
_07600
HUW76_07605: HUW76_07605 - lactate dehydrogenase, at 1,595,394 to 1,596,404
_07605
Position (kb)
1593
1594
1595
1596 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 1593.642 kb on + strand at 1593.642 kb on + strand at 1593.730 kb on + strand at 1593.732 kb on - strand at 1593.740 kb on - strand at 1593.740 kb on - strand at 1593.774 kb on - strand at 1593.801 kb on + strand at 1593.801 kb on + strand at 1593.816 kb on - strand at 1593.816 kb on - strand at 1593.878 kb on - strand at 1593.878 kb on - strand at 1593.898 kb on + strand, within HUW76_07600 at 1593.959 kb on - strand, within HUW76_07600 at 1593.959 kb on - strand, within HUW76_07600 at 1593.996 kb on - strand, within HUW76_07600 at 1593.996 kb on - strand, within HUW76_07600 at 1594.000 kb on + strand, within HUW76_07600 at 1594.008 kb on - strand, within HUW76_07600 at 1594.008 kb on - strand, within HUW76_07600 at 1594.008 kb on - strand, within HUW76_07600 at 1594.041 kb on - strand, within HUW76_07600 at 1594.060 kb on - strand, within HUW76_07600 at 1594.139 kb on - strand, within HUW76_07600 at 1594.152 kb on - strand, within HUW76_07600 at 1594.152 kb on - strand, within HUW76_07600 at 1594.152 kb on - strand, within HUW76_07600 at 1594.160 kb on - strand, within HUW76_07600 at 1594.202 kb on + strand, within HUW76_07600 at 1594.221 kb on - strand, within HUW76_07600 at 1594.336 kb on - strand, within HUW76_07600 at 1594.336 kb on - strand, within HUW76_07600 at 1594.369 kb on - strand, within HUW76_07600 at 1594.369 kb on - strand, within HUW76_07600 at 1594.369 kb on - strand, within HUW76_07600 at 1594.383 kb on + strand, within HUW76_07600 at 1594.404 kb on + strand, within HUW76_07600 at 1594.426 kb on - strand, within HUW76_07600 at 1594.426 kb on - strand, within HUW76_07600 at 1594.437 kb on - strand, within HUW76_07600 at 1594.437 kb on - strand, within HUW76_07600 at 1594.444 kb on - strand, within HUW76_07600 at 1594.444 kb on - strand, within HUW76_07600 at 1594.526 kb on - strand, within HUW76_07600 at 1594.526 kb on - strand, within HUW76_07600 at 1594.624 kb on + strand, within HUW76_07600 at 1594.646 kb on - strand, within HUW76_07600 at 1594.678 kb on + strand, within HUW76_07600 at 1594.703 kb on - strand, within HUW76_07600 at 1594.758 kb on + strand, within HUW76_07600 at 1594.766 kb on - strand, within HUW76_07600 at 1594.766 kb on - strand, within HUW76_07600 at 1594.788 kb on - strand, within HUW76_07600 at 1594.788 kb on - strand, within HUW76_07600 at 1594.804 kb on - strand, within HUW76_07600 at 1594.820 kb on - strand, within HUW76_07600 at 1594.820 kb on - strand, within HUW76_07600 at 1594.826 kb on + strand, within HUW76_07600 at 1594.831 kb on + strand, within HUW76_07600 at 1594.831 kb on + strand, within HUW76_07600 at 1594.831 kb on + strand, within HUW76_07600 at 1594.834 kb on - strand, within HUW76_07600 at 1594.834 kb on - strand, within HUW76_07600 at 1594.839 kb on - strand, within HUW76_07600 at 1594.839 kb on - strand, within HUW76_07600 at 1594.839 kb on - strand, within HUW76_07600 at 1594.839 kb on - strand, within HUW76_07600 at 1594.844 kb on - strand, within HUW76_07600 at 1594.844 kb on - strand, within HUW76_07600 at 1594.844 kb on - strand, within HUW76_07600 at 1594.844 kb on - strand, within HUW76_07600 at 1594.933 kb on - strand at 1594.933 kb on - strand at 1594.933 kb on - strand at 1594.933 kb on - strand at 1594.947 kb on - strand at 1594.993 kb on - strand at 1594.993 kb on - strand at 1594.994 kb on - strand at 1594.994 kb on - strand at 1594.994 kb on - strand at 1594.997 kb on + strand at 1595.005 kb on - strand at 1595.017 kb on + strand at 1595.025 kb on - strand at 1595.025 kb on - strand at 1595.025 kb on - strand at 1595.413 kb on + strand at 1595.413 kb on + strand at 1595.421 kb on - strand at 1595.453 kb on - strand at 1595.536 kb on + strand, within HUW76_07605 at 1595.536 kb on + strand, within HUW76_07605 at 1595.536 kb on + strand, within HUW76_07605 at 1595.536 kb on + strand, within HUW76_07605 at 1595.547 kb on + strand, within HUW76_07605 at 1595.574 kb on + strand, within HUW76_07605 at 1595.574 kb on + strand, within HUW76_07605 at 1595.591 kb on + strand, within HUW76_07605 at 1595.591 kb on + strand, within HUW76_07605 at 1595.591 kb on - strand, within HUW76_07605 at 1595.599 kb on - strand, within HUW76_07605 at 1595.607 kb on - strand, within HUW76_07605 at 1595.607 kb on - strand, within HUW76_07605 at 1595.623 kb on - strand, within HUW76_07605 at 1595.637 kb on - strand, within HUW76_07605 at 1595.642 kb on - strand, within HUW76_07605 at 1595.642 kb on - strand, within HUW76_07605 at 1595.698 kb on - strand, within HUW76_07605 at 1595.698 kb on - strand, within HUW76_07605 at 1595.732 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.756 kb on + strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.764 kb on - strand, within HUW76_07605 at 1595.823 kb on + strand, within HUW76_07605 at 1595.823 kb on + strand, within HUW76_07605 at 1595.823 kb on + strand, within HUW76_07605 at 1595.831 kb on - strand, within HUW76_07605 at 1595.842 kb on + strand, within HUW76_07605 at 1595.842 kb on + strand, within HUW76_07605 at 1595.845 kb on + strand, within HUW76_07605 at 1595.845 kb on + strand, within HUW76_07605 at 1595.892 kb on + strand, within HUW76_07605 at 1595.892 kb on + strand, within HUW76_07605 at 1595.919 kb on + strand, within HUW76_07605
Per-strain Table
Position Strand Gene LocusTag Fraction Time0_glycerolstock remove 1,593,642 + -0.4 1,593,642 + -0.1 1,593,730 + +1.1 1,593,732 - -0.0 1,593,740 - +0.4 1,593,740 - +0.3 1,593,774 - +2.1 1,593,801 + +3.0 1,593,801 + +3.3 1,593,816 - +1.3 1,593,816 - +1.0 1,593,878 - +1.8 1,593,878 - +3.5 1,593,898 + HUW76_07600 0.11 +1.7 1,593,959 - HUW76_07600 0.16 +1.2 1,593,959 - HUW76_07600 0.16 +1.7 1,593,996 - HUW76_07600 0.19 +0.7 1,593,996 - HUW76_07600 0.19 +2.0 1,594,000 + HUW76_07600 0.19 +2.9 1,594,008 - HUW76_07600 0.20 +2.2 1,594,008 - HUW76_07600 0.20 +1.1 1,594,008 - HUW76_07600 0.20 +1.5 1,594,041 - HUW76_07600 0.23 +0.8 1,594,060 - HUW76_07600 0.24 +0.8 1,594,139 - HUW76_07600 0.30 +1.7 1,594,152 - HUW76_07600 0.31 +2.5 1,594,152 - HUW76_07600 0.31 +3.5 1,594,152 - HUW76_07600 0.31 +2.3 1,594,160 - HUW76_07600 0.32 +2.1 1,594,202 + HUW76_07600 0.35 +2.6 1,594,221 - HUW76_07600 0.37 +1.9 1,594,336 - HUW76_07600 0.46 +2.2 1,594,336 - HUW76_07600 0.46 +1.7 1,594,369 - HUW76_07600 0.49 +2.1 1,594,369 - HUW76_07600 0.49 +1.3 1,594,369 - HUW76_07600 0.49 +0.9 1,594,383 + HUW76_07600 0.50 +1.5 1,594,404 + HUW76_07600 0.51 +2.9 1,594,426 - HUW76_07600 0.53 +0.9 1,594,426 - HUW76_07600 0.53 +1.4 1,594,437 - HUW76_07600 0.54 +1.6 1,594,437 - HUW76_07600 0.54 +3.0 1,594,444 - HUW76_07600 0.55 +1.9 1,594,444 - HUW76_07600 0.55 +0.7 1,594,526 - HUW76_07600 0.61 +2.8 1,594,526 - HUW76_07600 0.61 +1.2 1,594,624 + HUW76_07600 0.69 +1.8 1,594,646 - HUW76_07600 0.71 +1.0 1,594,678 + HUW76_07600 0.73 +2.5 1,594,703 - HUW76_07600 0.75 +2.2 1,594,758 + HUW76_07600 0.79 +2.1 1,594,766 - HUW76_07600 0.80 +1.9 1,594,766 - HUW76_07600 0.80 +1.3 1,594,788 - HUW76_07600 0.82 +4.7 1,594,788 - HUW76_07600 0.82 +1.1 1,594,804 - HUW76_07600 0.83 +1.4 1,594,820 - HUW76_07600 0.84 +1.8 1,594,820 - HUW76_07600 0.84 +1.7 1,594,826 + HUW76_07600 0.85 +1.1 1,594,831 + HUW76_07600 0.85 -0.6 1,594,831 + HUW76_07600 0.85 +1.6 1,594,831 + HUW76_07600 0.85 +1.9 1,594,834 - HUW76_07600 0.85 +2.6 1,594,834 - HUW76_07600 0.85 +2.0 1,594,839 - HUW76_07600 0.86 +1.8 1,594,839 - HUW76_07600 0.86 +2.1 1,594,839 - HUW76_07600 0.86 +2.7 1,594,839 - HUW76_07600 0.86 +3.3 1,594,844 - HUW76_07600 0.86 +1.3 1,594,844 - HUW76_07600 0.86 +2.6 1,594,844 - HUW76_07600 0.86 +2.5 1,594,844 - HUW76_07600 0.86 +2.5 1,594,933 - +1.4 1,594,933 - +2.7 1,594,933 - +1.4 1,594,933 - +0.5 1,594,947 - +1.2 1,594,993 - +2.8 1,594,993 - +0.7 1,594,994 - +1.5 1,594,994 - +2.7 1,594,994 - +1.8 1,594,997 + +2.1 1,595,005 - +2.3 1,595,017 + +1.2 1,595,025 - +1.9 1,595,025 - +2.8 1,595,025 - +1.6 1,595,413 + +5.7 1,595,413 + +0.2 1,595,421 - +2.9 1,595,453 - +2.5 1,595,536 + HUW76_07605 0.14 +4.0 1,595,536 + HUW76_07605 0.14 +2.7 1,595,536 + HUW76_07605 0.14 +3.1 1,595,536 + HUW76_07605 0.14 +3.5 1,595,547 + HUW76_07605 0.15 +2.5 1,595,574 + HUW76_07605 0.18 +3.0 1,595,574 + HUW76_07605 0.18 +4.3 1,595,591 + HUW76_07605 0.19 +2.3 1,595,591 + HUW76_07605 0.19 +3.0 1,595,591 - HUW76_07605 0.19 +3.0 1,595,599 - HUW76_07605 0.20 +2.3 1,595,607 - HUW76_07605 0.21 +3.3 1,595,607 - HUW76_07605 0.21 +1.7 1,595,623 - HUW76_07605 0.23 +3.2 1,595,637 - HUW76_07605 0.24 +2.1 1,595,642 - HUW76_07605 0.25 +3.0 1,595,642 - HUW76_07605 0.25 +2.3 1,595,698 - HUW76_07605 0.30 +3.5 1,595,698 - HUW76_07605 0.30 +2.3 1,595,732 + HUW76_07605 0.33 +3.2 1,595,756 + HUW76_07605 0.36 +1.3 1,595,756 + HUW76_07605 0.36 +2.4 1,595,756 + HUW76_07605 0.36 +2.1 1,595,756 + HUW76_07605 0.36 +3.2 1,595,756 + HUW76_07605 0.36 +1.5 1,595,756 + HUW76_07605 0.36 +0.7 1,595,756 + HUW76_07605 0.36 +2.7 1,595,756 + HUW76_07605 0.36 +3.8 1,595,756 + HUW76_07605 0.36 +4.0 1,595,756 + HUW76_07605 0.36 +2.4 1,595,756 + HUW76_07605 0.36 +3.8 1,595,756 + HUW76_07605 0.36 +3.6 1,595,756 + HUW76_07605 0.36 +3.7 1,595,756 + HUW76_07605 0.36 +2.8 1,595,756 + HUW76_07605 0.36 +3.2 1,595,756 + HUW76_07605 0.36 +2.5 1,595,756 + HUW76_07605 0.36 +3.9 1,595,756 + HUW76_07605 0.36 +1.9 1,595,756 + HUW76_07605 0.36 +2.0 1,595,756 + HUW76_07605 0.36 +3.8 1,595,756 + HUW76_07605 0.36 -0.3 1,595,756 + HUW76_07605 0.36 +1.9 1,595,756 + HUW76_07605 0.36 +2.6 1,595,756 + HUW76_07605 0.36 +2.2 1,595,756 + HUW76_07605 0.36 +2.0 1,595,756 + HUW76_07605 0.36 +2.2 1,595,756 + HUW76_07605 0.36 +2.5 1,595,756 + HUW76_07605 0.36 +1.8 1,595,756 + HUW76_07605 0.36 +2.8 1,595,756 + HUW76_07605 0.36 +2.9 1,595,756 + HUW76_07605 0.36 +2.3 1,595,764 - HUW76_07605 0.37 +3.7 1,595,764 - HUW76_07605 0.37 +1.1 1,595,764 - HUW76_07605 0.37 +3.0 1,595,764 - HUW76_07605 0.37 +3.3 1,595,764 - HUW76_07605 0.37 +2.8 1,595,764 - HUW76_07605 0.37 +3.7 1,595,764 - HUW76_07605 0.37 -2.0 1,595,764 - HUW76_07605 0.37 +2.5 1,595,764 - HUW76_07605 0.37 +3.9 1,595,764 - HUW76_07605 0.37 +2.7 1,595,764 - HUW76_07605 0.37 +3.5 1,595,764 - HUW76_07605 0.37 +1.7 1,595,764 - HUW76_07605 0.37 +4.0 1,595,764 - HUW76_07605 0.37 +1.7 1,595,764 - HUW76_07605 0.37 +3.3 1,595,764 - HUW76_07605 0.37 +3.0 1,595,764 - HUW76_07605 0.37 +3.2 1,595,764 - HUW76_07605 0.37 +1.3 1,595,764 - HUW76_07605 0.37 +2.1 1,595,764 - HUW76_07605 0.37 +3.3 1,595,764 - HUW76_07605 0.37 +1.7 1,595,764 - HUW76_07605 0.37 +1.9 1,595,764 - HUW76_07605 0.37 +2.3 1,595,764 - HUW76_07605 0.37 +2.1 1,595,764 - HUW76_07605 0.37 +1.4 1,595,764 - HUW76_07605 0.37 +0.4 1,595,764 - HUW76_07605 0.37 +3.1 1,595,764 - HUW76_07605 0.37 +4.7 1,595,764 - HUW76_07605 0.37 +3.9 1,595,764 - HUW76_07605 0.37 +2.5 1,595,823 + HUW76_07605 0.42 +2.0 1,595,823 + HUW76_07605 0.42 +3.1 1,595,823 + HUW76_07605 0.42 +2.7 1,595,831 - HUW76_07605 0.43 +3.4 1,595,842 + HUW76_07605 0.44 +3.0 1,595,842 + HUW76_07605 0.44 +3.7 1,595,845 + HUW76_07605 0.45 +3.7 1,595,845 + HUW76_07605 0.45 +0.5 1,595,892 + HUW76_07605 0.49 +4.3 1,595,892 + HUW76_07605 0.49 +2.9 1,595,919 + HUW76_07605 0.52 +1.4
Or see this region's nucleotide sequence