Experiment: Time0_glycerolstock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_07220 and HUW76_07225 are separated by 3 nucleotides HUW76_07225 and HUW76_07230 are separated by 425 nucleotides
HUW76_07220: HUW76_07220 - ABC transporter permease, at 1,501,018 to 1,502,187
_07220
HUW76_07225: HUW76_07225 - penicillin-binding protein 1C, at 1,502,191 to 1,504,437
_07225
HUW76_07230: HUW76_07230 - alpha-2-macroglobulin family protein, at 1,504,863 to 1,509,719
_07230
Position (kb)
1502
1503
1504
1505 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1502.236 kb on - strand at 1502.236 kb on - strand at 1502.236 kb on - strand at 1502.303 kb on - strand at 1502.303 kb on - strand at 1502.452 kb on - strand, within HUW76_07225 at 1502.452 kb on - strand, within HUW76_07225 at 1502.452 kb on - strand, within HUW76_07225 at 1502.462 kb on - strand, within HUW76_07225 at 1502.540 kb on - strand, within HUW76_07225 at 1502.634 kb on - strand, within HUW76_07225 at 1502.635 kb on - strand, within HUW76_07225 at 1502.651 kb on - strand, within HUW76_07225 at 1502.754 kb on - strand, within HUW76_07225 at 1502.830 kb on + strand, within HUW76_07225 at 1502.830 kb on + strand, within HUW76_07225 at 1502.830 kb on + strand, within HUW76_07225 at 1502.830 kb on + strand, within HUW76_07225 at 1502.830 kb on + strand, within HUW76_07225 at 1502.838 kb on - strand, within HUW76_07225 at 1502.838 kb on - strand, within HUW76_07225 at 1502.838 kb on - strand, within HUW76_07225 at 1502.838 kb on - strand, within HUW76_07225 at 1502.838 kb on - strand, within HUW76_07225 at 1502.838 kb on - strand, within HUW76_07225 at 1502.838 kb on - strand, within HUW76_07225 at 1502.907 kb on + strand, within HUW76_07225 at 1502.932 kb on - strand, within HUW76_07225 at 1502.932 kb on - strand, within HUW76_07225 at 1502.932 kb on - strand, within HUW76_07225 at 1502.932 kb on - strand, within HUW76_07225 at 1502.955 kb on - strand, within HUW76_07225 at 1502.973 kb on + strand, within HUW76_07225 at 1502.973 kb on + strand, within HUW76_07225 at 1503.055 kb on - strand, within HUW76_07225 at 1503.101 kb on + strand, within HUW76_07225 at 1503.101 kb on + strand, within HUW76_07225 at 1503.106 kb on + strand, within HUW76_07225 at 1503.106 kb on + strand, within HUW76_07225 at 1503.109 kb on - strand, within HUW76_07225 at 1503.135 kb on + strand, within HUW76_07225 at 1503.164 kb on - strand, within HUW76_07225 at 1503.202 kb on - strand, within HUW76_07225 at 1503.210 kb on + strand, within HUW76_07225 at 1503.214 kb on - strand, within HUW76_07225 at 1503.255 kb on - strand, within HUW76_07225 at 1503.255 kb on - strand, within HUW76_07225 at 1503.357 kb on - strand, within HUW76_07225 at 1503.418 kb on + strand, within HUW76_07225 at 1503.442 kb on - strand, within HUW76_07225 at 1503.487 kb on + strand, within HUW76_07225 at 1503.495 kb on - strand, within HUW76_07225 at 1503.495 kb on - strand, within HUW76_07225 at 1503.503 kb on + strand, within HUW76_07225 at 1503.538 kb on - strand, within HUW76_07225 at 1503.538 kb on - strand, within HUW76_07225 at 1503.543 kb on - strand, within HUW76_07225 at 1503.661 kb on + strand, within HUW76_07225 at 1503.730 kb on - strand, within HUW76_07225 at 1503.730 kb on - strand, within HUW76_07225 at 1503.788 kb on + strand, within HUW76_07225 at 1503.788 kb on + strand, within HUW76_07225 at 1503.796 kb on - strand, within HUW76_07225 at 1503.839 kb on + strand, within HUW76_07225 at 1503.945 kb on - strand, within HUW76_07225 at 1503.945 kb on - strand, within HUW76_07225 at 1504.007 kb on + strand, within HUW76_07225 at 1504.015 kb on - strand, within HUW76_07225 at 1504.015 kb on - strand, within HUW76_07225 at 1504.015 kb on - strand, within HUW76_07225 at 1504.071 kb on - strand, within HUW76_07225 at 1504.202 kb on + strand, within HUW76_07225 at 1504.205 kb on - strand, within HUW76_07225 at 1504.346 kb on - strand at 1504.350 kb on + strand at 1504.594 kb on + strand at 1504.594 kb on + strand at 1504.645 kb on + strand at 1504.730 kb on - strand at 1504.730 kb on - strand at 1504.730 kb on - strand at 1504.730 kb on - strand at 1504.732 kb on - strand at 1504.821 kb on + strand at 1504.889 kb on + strand at 1504.946 kb on + strand at 1504.955 kb on + strand at 1504.955 kb on + strand at 1504.970 kb on - strand at 1504.970 kb on - strand at 1505.003 kb on - strand at 1505.003 kb on - strand at 1505.022 kb on - strand at 1505.022 kb on - strand at 1505.038 kb on + strand at 1505.046 kb on - strand at 1505.149 kb on - strand at 1505.272 kb on + strand at 1505.280 kb on - strand at 1505.297 kb on - strand at 1505.297 kb on - strand at 1505.371 kb on + strand, within HUW76_07230
Per-strain Table
Position Strand Gene LocusTag Fraction Time0_glycerolstock remove 1,502,236 - +1.3 1,502,236 - +2.4 1,502,236 - +1.0 1,502,303 - +1.3 1,502,303 - +1.2 1,502,452 - HUW76_07225 0.12 +2.0 1,502,452 - HUW76_07225 0.12 +1.8 1,502,452 - HUW76_07225 0.12 +0.6 1,502,462 - HUW76_07225 0.12 +2.0 1,502,540 - HUW76_07225 0.16 +1.7 1,502,634 - HUW76_07225 0.20 +1.6 1,502,635 - HUW76_07225 0.20 +1.9 1,502,651 - HUW76_07225 0.20 +1.9 1,502,754 - HUW76_07225 0.25 +1.0 1,502,830 + HUW76_07225 0.28 +2.3 1,502,830 + HUW76_07225 0.28 +2.8 1,502,830 + HUW76_07225 0.28 +1.0 1,502,830 + HUW76_07225 0.28 +2.0 1,502,830 + HUW76_07225 0.28 -0.1 1,502,838 - HUW76_07225 0.29 +1.1 1,502,838 - HUW76_07225 0.29 +1.2 1,502,838 - HUW76_07225 0.29 +1.9 1,502,838 - HUW76_07225 0.29 +1.8 1,502,838 - HUW76_07225 0.29 +1.9 1,502,838 - HUW76_07225 0.29 +1.8 1,502,838 - HUW76_07225 0.29 +2.8 1,502,907 + HUW76_07225 0.32 +1.3 1,502,932 - HUW76_07225 0.33 +1.3 1,502,932 - HUW76_07225 0.33 +1.3 1,502,932 - HUW76_07225 0.33 +1.2 1,502,932 - HUW76_07225 0.33 +1.5 1,502,955 - HUW76_07225 0.34 +1.6 1,502,973 + HUW76_07225 0.35 +0.6 1,502,973 + HUW76_07225 0.35 -0.9 1,503,055 - HUW76_07225 0.38 +0.8 1,503,101 + HUW76_07225 0.40 +1.5 1,503,101 + HUW76_07225 0.40 +1.1 1,503,106 + HUW76_07225 0.41 +0.4 1,503,106 + HUW76_07225 0.41 +0.8 1,503,109 - HUW76_07225 0.41 +1.4 1,503,135 + HUW76_07225 0.42 +0.6 1,503,164 - HUW76_07225 0.43 +1.6 1,503,202 - HUW76_07225 0.45 +1.8 1,503,210 + HUW76_07225 0.45 +0.6 1,503,214 - HUW76_07225 0.46 +1.6 1,503,255 - HUW76_07225 0.47 +1.5 1,503,255 - HUW76_07225 0.47 +1.4 1,503,357 - HUW76_07225 0.52 +0.9 1,503,418 + HUW76_07225 0.55 +0.2 1,503,442 - HUW76_07225 0.56 +1.7 1,503,487 + HUW76_07225 0.58 +3.7 1,503,495 - HUW76_07225 0.58 +1.7 1,503,495 - HUW76_07225 0.58 +1.5 1,503,503 + HUW76_07225 0.58 +0.1 1,503,538 - HUW76_07225 0.60 +3.3 1,503,538 - HUW76_07225 0.60 +1.3 1,503,543 - HUW76_07225 0.60 +1.7 1,503,661 + HUW76_07225 0.65 +4.0 1,503,730 - HUW76_07225 0.68 +1.0 1,503,730 - HUW76_07225 0.68 +1.3 1,503,788 + HUW76_07225 0.71 +2.3 1,503,788 + HUW76_07225 0.71 +1.1 1,503,796 - HUW76_07225 0.71 +1.1 1,503,839 + HUW76_07225 0.73 +2.5 1,503,945 - HUW76_07225 0.78 +0.7 1,503,945 - HUW76_07225 0.78 +1.7 1,504,007 + HUW76_07225 0.81 +2.7 1,504,015 - HUW76_07225 0.81 +1.7 1,504,015 - HUW76_07225 0.81 +0.9 1,504,015 - HUW76_07225 0.81 +1.3 1,504,071 - HUW76_07225 0.84 +1.7 1,504,202 + HUW76_07225 0.89 +0.1 1,504,205 - HUW76_07225 0.90 +1.3 1,504,346 - +2.0 1,504,350 + +0.0 1,504,594 + +0.9 1,504,594 + -2.2 1,504,645 + -0.7 1,504,730 - -0.2 1,504,730 - +0.1 1,504,730 - +0.6 1,504,730 - +0.3 1,504,732 - +0.4 1,504,821 + +0.5 1,504,889 + +0.7 1,504,946 + +0.9 1,504,955 + +1.7 1,504,955 + +0.4 1,504,970 - +0.8 1,504,970 - +0.9 1,505,003 - +0.8 1,505,003 - +0.5 1,505,022 - +0.0 1,505,022 - +1.3 1,505,038 + +2.2 1,505,046 - +0.7 1,505,149 - +0.7 1,505,272 + +2.3 1,505,280 - +0.8 1,505,297 - +0.8 1,505,297 - +1.5 1,505,371 + HUW76_07230 0.10 +0.0
Or see this region's nucleotide sequence