Experiment: Time0_glycerolstock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_04030 and HUW76_04035 overlap by 1 nucleotides HUW76_04035 and HUW76_04040 are separated by 5 nucleotides HUW76_04040 and HUW76_04045 are separated by 14 nucleotides
HUW76_04030: HUW76_04030 - glycosyltransferase, at 810,938 to 812,083
_04030
HUW76_04035: HUW76_04035 - polysaccharide deacetylase family protein, at 812,083 to 812,835
_04035
HUW76_04040: HUW76_04040 - glycosyltransferase, at 812,841 to 813,698
_04040
HUW76_04045: HUW76_04045 - polysaccharide deacetylase family protein, at 813,713 to 814,795
_04045
Position (kb) 812
813 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 811.256 kb on - strand, within HUW76_04030 at 811.256 kb on - strand, within HUW76_04030 at 811.270 kb on + strand, within HUW76_04030 at 811.270 kb on + strand, within HUW76_04030 at 811.282 kb on - strand, within HUW76_04030 at 811.342 kb on + strand, within HUW76_04030 at 811.392 kb on + strand, within HUW76_04030 at 811.392 kb on + strand, within HUW76_04030 at 811.392 kb on + strand, within HUW76_04030 at 811.604 kb on + strand, within HUW76_04030 at 811.690 kb on + strand, within HUW76_04030 at 811.690 kb on + strand, within HUW76_04030 at 811.739 kb on + strand, within HUW76_04030 at 811.739 kb on + strand, within HUW76_04030 at 811.852 kb on + strand, within HUW76_04030 at 811.852 kb on + strand, within HUW76_04030 at 811.852 kb on + strand, within HUW76_04030 at 811.857 kb on + strand, within HUW76_04030 at 811.857 kb on + strand, within HUW76_04030 at 811.857 kb on + strand, within HUW76_04030 at 811.864 kb on + strand, within HUW76_04030 at 811.865 kb on - strand, within HUW76_04030 at 811.873 kb on - strand, within HUW76_04030 at 811.884 kb on + strand, within HUW76_04030 at 811.933 kb on + strand, within HUW76_04030 at 811.933 kb on + strand, within HUW76_04030 at 811.941 kb on - strand, within HUW76_04030 at 811.981 kb on + strand at 812.135 kb on + strand at 812.367 kb on + strand, within HUW76_04035 at 812.443 kb on - strand, within HUW76_04035 at 812.452 kb on + strand, within HUW76_04035 at 812.504 kb on + strand, within HUW76_04035 at 812.596 kb on + strand, within HUW76_04035 at 812.628 kb on + strand, within HUW76_04035 at 812.677 kb on + strand, within HUW76_04035 at 812.806 kb on - strand at 812.832 kb on + strand at 812.832 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Time0_glycerolstock remove 811,256 - HUW76_04030 0.28 +0.7 811,256 - HUW76_04030 0.28 +2.4 811,270 + HUW76_04030 0.29 +1.4 811,270 + HUW76_04030 0.29 +1.8 811,282 - HUW76_04030 0.30 +1.0 811,342 + HUW76_04030 0.35 +0.3 811,392 + HUW76_04030 0.40 +0.2 811,392 + HUW76_04030 0.40 +0.6 811,392 + HUW76_04030 0.40 -0.0 811,604 + HUW76_04030 0.58 -0.5 811,690 + HUW76_04030 0.66 -0.2 811,690 + HUW76_04030 0.66 +0.4 811,739 + HUW76_04030 0.70 -0.3 811,739 + HUW76_04030 0.70 -0.4 811,852 + HUW76_04030 0.80 -0.7 811,852 + HUW76_04030 0.80 -0.4 811,852 + HUW76_04030 0.80 -0.2 811,857 + HUW76_04030 0.80 +0.2 811,857 + HUW76_04030 0.80 -0.4 811,857 + HUW76_04030 0.80 -0.3 811,864 + HUW76_04030 0.81 -0.6 811,865 - HUW76_04030 0.81 +4.4 811,873 - HUW76_04030 0.82 +4.4 811,884 + HUW76_04030 0.83 +0.2 811,933 + HUW76_04030 0.87 -0.4 811,933 + HUW76_04030 0.87 +0.1 811,941 - HUW76_04030 0.88 +2.6 811,981 + -0.0 812,135 + +0.2 812,367 + HUW76_04035 0.38 -0.9 812,443 - HUW76_04035 0.48 +3.4 812,452 + HUW76_04035 0.49 -0.9 812,504 + HUW76_04035 0.56 -0.7 812,596 + HUW76_04035 0.68 -0.8 812,628 + HUW76_04035 0.72 -0.3 812,677 + HUW76_04035 0.79 +0.1 812,806 - +2.4 812,832 + -1.4 812,832 + -1.4
Or see this region's nucleotide sequence