Experiment: Time0_glycerolstock
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_00600 and HUW76_00605 are separated by 215 nucleotides HUW76_00605 and HUW76_00610 are separated by 51 nucleotides HUW76_00610 and HUW76_00615 are separated by 32 nucleotides HUW76_00615 and HUW76_00620 are separated by 281 nucleotides
HUW76_00600: HUW76_00600 - molecular chaperone DnaJ, at 117,595 to 118,776
_00600
HUW76_00605: HUW76_00605 - hypothetical protein, at 118,992 to 119,165
_00605
HUW76_00610: HUW76_00610 - hypothetical protein, at 119,217 to 119,396
_00610
HUW76_00615: HUW76_00615 - hypothetical protein, at 119,429 to 119,602
_00615
HUW76_00620: HUW76_00620 - ATP-binding protein, at 119,884 to 120,474
_00620
Position (kb) 119
120 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 118.441 kb on + strand, within HUW76_00600 at 118.441 kb on + strand, within HUW76_00600 at 118.488 kb on - strand, within HUW76_00600 at 118.495 kb on + strand, within HUW76_00600 at 118.500 kb on + strand, within HUW76_00600 at 118.500 kb on + strand, within HUW76_00600 at 118.594 kb on + strand, within HUW76_00600 at 118.609 kb on - strand, within HUW76_00600 at 118.624 kb on - strand, within HUW76_00600 at 118.624 kb on - strand, within HUW76_00600 at 118.847 kb on + strand at 118.865 kb on - strand at 118.925 kb on - strand at 119.059 kb on + strand, within HUW76_00605 at 119.081 kb on + strand, within HUW76_00605 at 119.096 kb on + strand, within HUW76_00605 at 119.104 kb on - strand, within HUW76_00605 at 119.114 kb on - strand, within HUW76_00605 at 119.163 kb on - strand at 119.163 kb on - strand at 119.172 kb on + strand at 119.262 kb on - strand, within HUW76_00610 at 119.403 kb on + strand at 119.404 kb on - strand at 119.404 kb on - strand at 119.455 kb on + strand, within HUW76_00615 at 119.592 kb on + strand at 119.647 kb on + strand at 119.925 kb on - strand at 119.956 kb on + strand, within HUW76_00620 at 119.992 kb on - strand, within HUW76_00620 at 120.020 kb on - strand, within HUW76_00620 at 120.263 kb on - strand, within HUW76_00620 at 120.263 kb on - strand, within HUW76_00620 at 120.321 kb on + strand, within HUW76_00620 at 120.335 kb on - strand, within HUW76_00620 at 120.385 kb on - strand, within HUW76_00620
Per-strain Table
Position Strand Gene LocusTag Fraction Time0_glycerolstock remove 118,441 + HUW76_00600 0.72 +3.1 118,441 + HUW76_00600 0.72 +4.0 118,488 - HUW76_00600 0.76 +0.6 118,495 + HUW76_00600 0.76 +3.4 118,500 + HUW76_00600 0.77 -1.1 118,500 + HUW76_00600 0.77 -0.1 118,594 + HUW76_00600 0.85 +2.4 118,609 - HUW76_00600 0.86 +1.8 118,624 - HUW76_00600 0.87 +0.3 118,624 - HUW76_00600 0.87 -0.0 118,847 + -0.2 118,865 - +0.5 118,925 - -0.2 119,059 + HUW76_00605 0.39 -0.4 119,081 + HUW76_00605 0.51 -0.1 119,096 + HUW76_00605 0.60 +0.5 119,104 - HUW76_00605 0.64 -0.5 119,114 - HUW76_00605 0.70 -0.2 119,163 - -0.5 119,163 - +0.0 119,172 + +0.4 119,262 - HUW76_00610 0.25 -0.0 119,403 + -0.6 119,404 - -0.7 119,404 - -0.4 119,455 + HUW76_00615 0.15 -0.6 119,592 + +0.1 119,647 + +0.1 119,925 - +0.3 119,956 + HUW76_00620 0.12 -0.0 119,992 - HUW76_00620 0.18 -0.2 120,020 - HUW76_00620 0.23 +0.6 120,263 - HUW76_00620 0.64 +0.2 120,263 - HUW76_00620 0.64 +1.2 120,321 + HUW76_00620 0.74 -0.9 120,335 - HUW76_00620 0.76 -1.5 120,385 - HUW76_00620 0.85 -0.5
Or see this region's nucleotide sequence