Strain Fitness in Fusobacterium nucleatum SB010 around HUW76_00045

Experiment: Time0_glycerolstock

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHUW76_00040 and HUW76_00045 are separated by 12 nucleotidesHUW76_00045 and HUW76_00050 are separated by 26 nucleotides HUW76_00040: HUW76_00040 - DNA gyrase subunit A, at 6,798 to 9,233 _00040 HUW76_00045: HUW76_00045 - metallophosphoesterase, at 9,246 to 9,707 _00045 HUW76_00050: HUW76_00050 - phenylalanine--tRNA ligase subunit alpha, at 9,734 to 10,750 _00050 Position (kb) 9 10Strain fitness (log2 ratio) -1 0 1at 9.358 kb on + strand, within HUW76_00045at 9.358 kb on + strand, within HUW76_00045at 9.631 kb on + strand, within HUW76_00045at 9.701 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Time0_glycerolstock
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9,358 + HUW76_00045 0.24 +0.4
9,358 + HUW76_00045 0.24 +0.4
9,631 + HUW76_00045 0.83 -1.0
9,701 + -0.3

Or see this region's nucleotide sequence