Experiment: Control_ECRC98
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt eutH and eutA overlap by 4 nucleotides eutA and eutA are separated by 6 nucleotides eutA and eutB are separated by 11 nucleotides
JDDGAC_26005: eutH - ethanolamine utilization protein EutH, at 4,975,427 to 4,976,653
eutH
JDDGAC_26010: eutA - ethanolamine ammonia-lyase reactivating factor EutA, at 4,976,650 to 4,977,207
eutA
JDDGAC_26015: eutA - ethanolamine ammonia-lyase reactivating factor EutA, at 4,977,214 to 4,978,053
eutA
JDDGAC_26020: eutB - ethanolamine ammonia-lyase subunit alpha, at 4,978,065 to 4,979,426
eutB
Position (kb)
4976
4977
4978 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4975.650 kb on + strand, within eutH at 4975.883 kb on + strand, within eutH at 4975.933 kb on + strand, within eutH at 4975.954 kb on + strand, within eutH at 4975.954 kb on + strand, within eutH at 4975.954 kb on + strand, within eutH at 4975.954 kb on + strand, within eutH at 4975.954 kb on + strand, within eutH at 4975.954 kb on + strand, within eutH at 4975.955 kb on - strand, within eutH at 4975.955 kb on - strand, within eutH at 4975.958 kb on + strand, within eutH at 4975.958 kb on + strand, within eutH at 4975.958 kb on + strand, within eutH at 4975.958 kb on + strand, within eutH at 4976.200 kb on + strand, within eutH at 4976.200 kb on + strand, within eutH at 4976.502 kb on + strand, within eutH at 4976.502 kb on + strand, within eutH at 4976.502 kb on + strand, within eutH at 4976.502 kb on + strand, within eutH at 4976.503 kb on - strand, within eutH at 4976.811 kb on + strand, within eutA at 4976.837 kb on + strand, within eutA at 4976.867 kb on + strand, within eutA at 4977.127 kb on + strand, within eutA at 4977.127 kb on + strand, within eutA at 4977.128 kb on - strand, within eutA at 4977.206 kb on - strand at 4977.381 kb on - strand, within eutA at 4977.427 kb on - strand, within eutA at 4977.603 kb on + strand, within eutA at 4977.604 kb on - strand, within eutA at 4977.604 kb on - strand, within eutA at 4977.644 kb on + strand, within eutA at 4977.644 kb on + strand, within eutA at 4977.644 kb on + strand, within eutA at 4977.645 kb on - strand, within eutA at 4977.645 kb on - strand, within eutA at 4977.757 kb on + strand, within eutA at 4977.757 kb on + strand, within eutA at 4977.757 kb on + strand, within eutA at 4977.757 kb on + strand, within eutA at 4977.758 kb on - strand, within eutA at 4977.891 kb on + strand, within eutA at 4977.923 kb on + strand, within eutA at 4977.924 kb on - strand, within eutA at 4977.977 kb on - strand at 4977.979 kb on - strand at 4977.990 kb on + strand at 4977.990 kb on + strand at 4978.064 kb on + strand at 4978.064 kb on + strand at 4978.065 kb on - strand at 4978.072 kb on + strand at 4978.097 kb on - strand at 4978.097 kb on - strand at 4978.097 kb on - strand at 4978.107 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECRC98 remove 4,975,650 + eutH JDDGAC_26005 0.18 +1.0 4,975,883 + eutH JDDGAC_26005 0.37 -0.9 4,975,933 + eutH JDDGAC_26005 0.41 -0.9 4,975,954 + eutH JDDGAC_26005 0.43 -0.3 4,975,954 + eutH JDDGAC_26005 0.43 -0.5 4,975,954 + eutH JDDGAC_26005 0.43 +0.1 4,975,954 + eutH JDDGAC_26005 0.43 -0.3 4,975,954 + eutH JDDGAC_26005 0.43 -0.4 4,975,954 + eutH JDDGAC_26005 0.43 -0.1 4,975,955 - eutH JDDGAC_26005 0.43 +1.2 4,975,955 - eutH JDDGAC_26005 0.43 -1.2 4,975,958 + eutH JDDGAC_26005 0.43 +0.8 4,975,958 + eutH JDDGAC_26005 0.43 +1.2 4,975,958 + eutH JDDGAC_26005 0.43 +0.6 4,975,958 + eutH JDDGAC_26005 0.43 -2.4 4,976,200 + eutH JDDGAC_26005 0.63 -1.3 4,976,200 + eutH JDDGAC_26005 0.63 +2.1 4,976,502 + eutH JDDGAC_26005 0.88 -0.7 4,976,502 + eutH JDDGAC_26005 0.88 +1.1 4,976,502 + eutH JDDGAC_26005 0.88 +0.2 4,976,502 + eutH JDDGAC_26005 0.88 -1.0 4,976,503 - eutH JDDGAC_26005 0.88 -0.9 4,976,811 + eutA JDDGAC_26010 0.29 -0.8 4,976,837 + eutA JDDGAC_26010 0.34 -1.5 4,976,867 + eutA JDDGAC_26010 0.39 -2.5 4,977,127 + eutA JDDGAC_26010 0.85 +0.2 4,977,127 + eutA JDDGAC_26010 0.85 -1.6 4,977,128 - eutA JDDGAC_26010 0.86 -0.3 4,977,206 - -0.5 4,977,381 - eutA JDDGAC_26015 0.20 +0.0 4,977,427 - eutA JDDGAC_26015 0.25 +1.8 4,977,603 + eutA JDDGAC_26015 0.46 -0.3 4,977,604 - eutA JDDGAC_26015 0.46 -0.2 4,977,604 - eutA JDDGAC_26015 0.46 -0.3 4,977,644 + eutA JDDGAC_26015 0.51 -0.5 4,977,644 + eutA JDDGAC_26015 0.51 -0.6 4,977,644 + eutA JDDGAC_26015 0.51 -0.5 4,977,645 - eutA JDDGAC_26015 0.51 -1.0 4,977,645 - eutA JDDGAC_26015 0.51 +0.1 4,977,757 + eutA JDDGAC_26015 0.65 +0.4 4,977,757 + eutA JDDGAC_26015 0.65 +0.4 4,977,757 + eutA JDDGAC_26015 0.65 -0.1 4,977,757 + eutA JDDGAC_26015 0.65 +0.0 4,977,758 - eutA JDDGAC_26015 0.65 -1.2 4,977,891 + eutA JDDGAC_26015 0.81 +0.5 4,977,923 + eutA JDDGAC_26015 0.84 +0.4 4,977,924 - eutA JDDGAC_26015 0.85 +1.8 4,977,977 - -2.0 4,977,979 - +0.2 4,977,990 + -1.2 4,977,990 + -0.2 4,978,064 + +0.5 4,978,064 + +1.2 4,978,065 - -1.6 4,978,072 + -0.5 4,978,097 - +0.5 4,978,097 - +0.5 4,978,097 - -2.0 4,978,107 - +2.0
Or see this region's nucleotide sequence