Strain Fitness in Escherichia coli ECRC98 around JDDGAC_08375

Experiment: Control_ECRC98

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECRC98
1,469,787	+	gfcE	JDDGAC_08365	0.59	-1.4
1,469,933	+	gfcE	JDDGAC_08365	0.72	-0.6
1,470,117	+	gfcE	JDDGAC_08365	0.88	-1.8
1,470,118	-	gfcE	JDDGAC_08365	0.89	+1.1
1,470,129	+	gfcE	JDDGAC_08365	0.89	-2.1
1,470,129	+	gfcE	JDDGAC_08365	0.89	-1.3
1,470,336	+	etp	JDDGAC_08370	0.22	+0.3
1,470,369	+	etp	JDDGAC_08370	0.30	-0.6
1,470,420	+	etp	JDDGAC_08370	0.41	-0.3
1,470,445	+	etp	JDDGAC_08370	0.47	+0.5
1,470,505	+	etp	JDDGAC_08370	0.60	+0.2
1,470,505	+	etp	JDDGAC_08370	0.60	+1.4
1,470,506	-	etp	JDDGAC_08370	0.60	-0.7
1,470,506	-	etp	JDDGAC_08370	0.60	-1.1
1,470,693	+				+0.0
1,470,693	+				-0.3
1,470,698	+				-0.2
1,470,800	+				-0.7
1,470,801	-				-0.6
1,470,935	+	etk	JDDGAC_08375	0.11	-1.1
1,470,935	+	etk	JDDGAC_08375	0.11	-1.4
1,470,935	+	etk	JDDGAC_08375	0.11	-0.6
1,470,936	-	etk	JDDGAC_08375	0.11	-1.5
1,471,004	+	etk	JDDGAC_08375	0.14	-1.7
1,471,050	+	etk	JDDGAC_08375	0.16	-1.3
1,471,127	+	etk	JDDGAC_08375	0.19	+0.2
1,471,128	-	etk	JDDGAC_08375	0.20	-0.6
1,471,189	-	etk	JDDGAC_08375	0.22	-0.4
1,471,190	+	etk	JDDGAC_08375	0.22	-2.0
1,471,191	-	etk	JDDGAC_08375	0.22	-0.7
1,471,277	+	etk	JDDGAC_08375	0.26	-1.4
1,471,278	-	etk	JDDGAC_08375	0.26	+0.8
1,471,397	+	etk	JDDGAC_08375	0.32	-0.6
1,471,459	-	etk	JDDGAC_08375	0.35	-0.6
1,471,459	-	etk	JDDGAC_08375	0.35	+1.7
1,471,653	-	etk	JDDGAC_08375	0.44	-0.9
1,471,701	+	etk	JDDGAC_08375	0.46	-1.6
1,471,702	-	etk	JDDGAC_08375	0.46	+0.6
1,471,778	+	etk	JDDGAC_08375	0.49	+0.2
1,471,837	+	etk	JDDGAC_08375	0.52	-1.1
1,471,855	+	etk	JDDGAC_08375	0.53	-0.3
1,471,855	+	etk	JDDGAC_08375	0.53	-1.5
1,471,857	+	etk	JDDGAC_08375	0.53	-2.7
1,471,857	+	etk	JDDGAC_08375	0.53	-3.2
1,471,867	+	etk	JDDGAC_08375	0.53	-1.2
1,471,867	+	etk	JDDGAC_08375	0.53	-1.0
1,472,168	+	etk	JDDGAC_08375	0.67	-1.5
1,472,186	+	etk	JDDGAC_08375	0.68	-0.5
1,472,187	-	etk	JDDGAC_08375	0.68	-0.4
1,472,245	+	etk	JDDGAC_08375	0.71	-1.9
1,472,333	+	etk	JDDGAC_08375	0.75	-0.3
1,472,392	+	etk	JDDGAC_08375	0.77	-1.0
1,472,393	-	etk	JDDGAC_08375	0.78	+0.3
1,472,396	+	etk	JDDGAC_08375	0.78	-0.4
1,472,396	+	etk	JDDGAC_08375	0.78	-1.6
1,472,396	+	etk	JDDGAC_08375	0.78	-1.4
1,472,410	+	etk	JDDGAC_08375	0.78	+0.5
1,472,447	+	etk	JDDGAC_08375	0.80	+1.8
1,472,537	+	etk	JDDGAC_08375	0.84	-1.6
1,472,558	+	etk	JDDGAC_08375	0.85	-0.4
1,472,622	+	etk	JDDGAC_08375	0.88	-0.5
1,472,622	+	etk	JDDGAC_08375	0.88	-0.7
1,472,783	+				-0.9
1,472,833	-				-0.3
1,472,838	+				-0.6
1,472,844	+				-2.2
1,472,850	+				-0.5
1,472,851	-				+0.8
1,472,861	+				-1.4
1,472,866	-				+0.5
1,472,881	-				-0.3
1,472,892	+				-0.2
1,472,997	-				-0.3
1,473,131	+				+0.4
1,473,132	-				-0.5
1,473,320	-	appA	JDDGAC_08380	0.24	-0.2
1,473,859	+	appA	JDDGAC_08380	0.64	-1.2
1,473,860	-	appA	JDDGAC_08380	0.64	-0.2
1,473,860	-	appA	JDDGAC_08380	0.64	+2.5