Strain Fitness in Escherichia coli ECRC98 around JDDGAC_28290

Experiment: WM_Bas58

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas58
5,418,579	-	yegP	JDDGAC_28280	0.89	+2.2
5,418,614	+				+0.2
5,418,615	-				-1.1
5,418,655	+				-0.2
5,418,655	+				+1.0
5,418,655	+				-1.6
5,418,655	+				-0.3
5,418,865	-				+0.4
5,418,865	-				-0.8
5,418,944	-	baeR	JDDGAC_28285	0.19	+1.8
5,419,193	+	baeR	JDDGAC_28285	0.54	+0.3
5,419,209	-	baeR	JDDGAC_28285	0.56	-0.0
5,419,235	-	baeR	JDDGAC_28285	0.59	-0.7
5,419,382	+	baeR	JDDGAC_28285	0.80	-0.2
5,419,383	-	baeR	JDDGAC_28285	0.80	-0.6
5,419,443	-	baeR	JDDGAC_28285	0.88	+0.6
5,419,443	-	baeR	JDDGAC_28285	0.88	+2.3
5,419,539	+				-0.3
5,419,568	+				+0.0
5,419,568	+				+0.0
5,419,568	+				-2.9
5,419,569	-				-1.6
5,419,605	-				-1.2
5,419,617	-				+0.8
5,419,617	-				+0.8
5,419,617	-				+1.4
5,420,466	-	baeS	JDDGAC_28290	0.67	-1.4
5,420,775	+	baeS	JDDGAC_28290	0.89	-2.8
5,420,789	+				+1.1
5,420,790	-				-0.1
5,420,804	-				-0.4
5,420,804	-				+0.6
5,420,907	-				+1.1
5,420,958	-				+1.0
5,421,028	+				+0.8
5,421,029	-				-0.5
5,421,039	+				-1.1
5,421,039	+				+0.8
5,421,039	+				-0.7
5,421,044	-				+0.5
5,421,280	-	mdtD	JDDGAC_28295	0.25	-1.0
5,421,282	+	mdtD	JDDGAC_28295	0.25	+0.1
5,421,307	+	mdtD	JDDGAC_28295	0.27	+0.7
5,421,308	-	mdtD	JDDGAC_28295	0.27	+0.9
5,421,556	+	mdtD	JDDGAC_28295	0.45	+0.3
5,421,557	-	mdtD	JDDGAC_28295	0.45	+0.2
5,421,710	+	mdtD	JDDGAC_28295	0.56	+0.6
5,421,738	-	mdtD	JDDGAC_28295	0.57	+1.2
5,421,778	-	mdtD	JDDGAC_28295	0.60	-1.1
5,421,862	-	mdtD	JDDGAC_28295	0.66	+2.1