Strain Fitness in Escherichia coli ECRC98 around JDDGAC_02130

Experiment: WM_Bas58

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas58
379,672	-	rsxE	JDDGAC_02120	0.53	-2.7
379,672	-	rsxE	JDDGAC_02120	0.53	+0.5
379,785	-	rsxE	JDDGAC_02120	0.69	-1.2
379,856	-	rsxE	JDDGAC_02120	0.79	-0.5
379,864	-	rsxE	JDDGAC_02120	0.81	-0.8
379,864	-	rsxE	JDDGAC_02120	0.81	-1.0
379,977	+				-0.0
380,004	-				-0.1
380,055	-				-1.5
380,411	-	rsxG	JDDGAC_02125	0.66	-0.9
380,593	-				+0.7
380,593	-				-0.4
380,664	-				+0.4
380,666	+				+0.7
380,756	-	rsxD	JDDGAC_02130	0.12	-1.0
380,756	-	rsxD	JDDGAC_02130	0.12	+0.2
380,803	-	rsxD	JDDGAC_02130	0.17	-0.9
380,939	-	rsxD	JDDGAC_02130	0.30	-0.1
380,939	-	rsxD	JDDGAC_02130	0.30	+1.5
380,989	+	rsxD	JDDGAC_02130	0.34	-1.0
381,017	-	rsxD	JDDGAC_02130	0.37	-1.1
381,070	-	rsxD	JDDGAC_02130	0.42	-2.4
381,109	-	rsxD	JDDGAC_02130	0.46	+0.3
381,158	-	rsxD	JDDGAC_02130	0.50	-1.5
381,436	+	rsxD	JDDGAC_02130	0.76	-2.2
381,503	-	rsxD	JDDGAC_02130	0.83	-1.4
381,625	-				-2.3
381,655	-				-0.9
381,656	+				-1.9
381,657	-				-3.3
381,796	-				+0.9
381,931	-	rsxC	JDDGAC_02135	0.11	+0.8
382,474	-	rsxC	JDDGAC_02135	0.34	+1.0
382,483	-	rsxC	JDDGAC_02135	0.34	+0.2
382,483	-	rsxC	JDDGAC_02135	0.34	-0.3
382,570	-	rsxC	JDDGAC_02135	0.38	-0.1