Strain Fitness in Escherichia coli ECRC98 around JDDGAC_08055

Experiment: Bas61

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas61
1,397,280	+	fabB	JDDGAC_08050	0.71	+0.0
1,397,280	+	fabB	JDDGAC_08050	0.71	+0.6
1,397,313	+	fabB	JDDGAC_08050	0.73	+0.7
1,397,313	+	fabB	JDDGAC_08050	0.73	-1.0
1,397,380	+	fabB	JDDGAC_08050	0.75	+1.1
1,397,437	-	fabB	JDDGAC_08050	0.77	+1.2
1,397,527	+	fabB	JDDGAC_08050	0.81	+0.2
1,397,561	+	fabB	JDDGAC_08050	0.82	+0.9
1,397,924	+				+0.3
1,397,987	-				+3.4
1,397,987	-				+1.4
1,398,066	-				-0.4
1,398,122	-				+2.0
1,398,122	-				-0.3
1,398,173	+				+0.8
1,398,245	-	gcvT	JDDGAC_08055	0.14	+0.6
1,398,314	-	gcvT	JDDGAC_08055	0.20	+2.5
1,398,593	-	gcvT	JDDGAC_08055	0.44	-1.1
1,398,662	-	gcvT	JDDGAC_08055	0.50	+0.4
1,398,681	-	gcvT	JDDGAC_08055	0.51	+0.7
1,398,722	-	gcvT	JDDGAC_08055	0.55	-1.4
1,398,727	+	gcvT	JDDGAC_08055	0.55	-1.5
1,398,727	+	gcvT	JDDGAC_08055	0.55	-1.0
1,398,917	+	gcvT	JDDGAC_08055	0.71	+2.1
1,398,937	+	gcvT	JDDGAC_08055	0.73	+1.6
1,398,962	-	gcvT	JDDGAC_08055	0.75	+1.3
1,398,962	-	gcvT	JDDGAC_08055	0.75	+1.0
1,398,962	-	gcvT	JDDGAC_08055	0.75	-2.6
1,398,962	-	gcvT	JDDGAC_08055	0.75	-1.6
1,399,169	-				+0.1
1,399,194	-				+1.6
1,399,196	-				-0.1
1,399,196	-				-0.9
1,399,196	-				-0.8
1,399,281	-				+0.1
1,399,337	-		JDDGAC_08060	0.19	+0.7
1,399,451	-		JDDGAC_08060	0.60	+1.8
1,399,559	-				+1.8
1,399,565	-				-0.7
1,399,659	+	fabA	JDDGAC_08065	0.13	+0.1
1,399,986	+	fabA	JDDGAC_08065	0.73	-1.1
1,399,987	-	fabA	JDDGAC_08065	0.73	-0.1
1,399,998	+	fabA	JDDGAC_08065	0.75	-0.0
1,399,998	+	fabA	JDDGAC_08065	0.75	-0.4
1,399,998	+	fabA	JDDGAC_08065	0.75	-1.7
1,399,999	-	fabA	JDDGAC_08065	0.75	-0.4
1,400,187	+				-1.5
1,400,187	+				+0.0
1,400,188	-				-1.1
1,400,188	-				+2.4
1,400,208	-				+0.1
1,400,243	-	fabG	JDDGAC_08070	0.14	-2.0