Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS18005

Experiment: defined media with D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with D-Glucose
3,953,905	+		LRK53_RS18000	0.30	-1.0
3,953,906	-		LRK53_RS18000	0.30	-0.4
3,954,024	+		LRK53_RS18000	0.40	-1.3
3,954,076	+		LRK53_RS18000	0.45	-0.2
3,954,076	+		LRK53_RS18000	0.45	+0.1
3,954,076	+		LRK53_RS18000	0.45	-1.2
3,954,076	+		LRK53_RS18000	0.45	-0.9
3,954,077	-		LRK53_RS18000	0.45	-0.1
3,954,077	-		LRK53_RS18000	0.45	-0.3
3,954,077	-		LRK53_RS18000	0.45	-1.2
3,954,077	-		LRK53_RS18000	0.45	-1.3
3,954,077	-		LRK53_RS18000	0.45	-0.6
3,954,118	+		LRK53_RS18000	0.49	-0.4
3,954,118	+		LRK53_RS18000	0.49	+1.1
3,954,119	-		LRK53_RS18000	0.49	-1.7
3,954,161	+		LRK53_RS18000	0.52	-0.3
3,954,161	+		LRK53_RS18000	0.52	-2.1
3,954,161	+		LRK53_RS18000	0.52	-1.4
3,954,161	+		LRK53_RS18000	0.52	-0.4
3,954,162	-		LRK53_RS18000	0.52	-1.4
3,954,162	-		LRK53_RS18000	0.52	+1.7
3,954,162	-		LRK53_RS18000	0.52	-0.4
3,954,341	-		LRK53_RS18000	0.68	-1.2
3,954,341	-		LRK53_RS18000	0.68	-3.3
3,954,455	-		LRK53_RS18000	0.78	-1.2
3,954,820	+				+0.1
3,954,821	-				-0.5
3,954,821	-				+1.1
3,954,821	-				-1.0
3,954,821	-				+1.7
3,954,891	+				-0.4
3,954,891	+				-0.1
3,954,891	+				+1.1
3,954,892	-				+0.6
3,954,892	-				-1.7
3,954,892	-				-2.2
3,955,041	+				+2.6
3,955,041	+				+0.1
3,955,062	+		LRK53_RS18005	0.11	-2.0
3,955,062	+		LRK53_RS18005	0.11	-0.6
3,955,062	+		LRK53_RS18005	0.11	-1.4
3,955,062	+		LRK53_RS18005	0.11	+1.1
3,955,063	-		LRK53_RS18005	0.11	-0.9
3,955,452	+		LRK53_RS18005	0.26	+1.1
3,955,452	+		LRK53_RS18005	0.26	-0.4
3,955,452	+		LRK53_RS18005	0.26	+0.7
3,955,452	+		LRK53_RS18005	0.26	-0.9
3,955,452	+		LRK53_RS18005	0.26	+2.1
3,955,453	-		LRK53_RS18005	0.26	-0.2
3,955,453	-		LRK53_RS18005	0.26	-0.9
3,955,453	-		LRK53_RS18005	0.26	-1.0
3,955,477	+		LRK53_RS18005	0.27	-0.2
3,955,477	+		LRK53_RS18005	0.27	+0.7
3,955,477	+		LRK53_RS18005	0.27	+0.4
3,955,477	+		LRK53_RS18005	0.27	-0.7
3,955,477	+		LRK53_RS18005	0.27	+0.7
3,955,478	-		LRK53_RS18005	0.27	-0.4
3,955,531	-		LRK53_RS18005	0.30	-0.4
3,955,930	+		LRK53_RS18005	0.46	-0.4
3,955,930	+		LRK53_RS18005	0.46	-0.5
3,955,930	+		LRK53_RS18005	0.46	-1.3
3,955,930	+		LRK53_RS18005	0.46	-0.7
3,955,931	-		LRK53_RS18005	0.46	+1.1
3,956,097	+		LRK53_RS18005	0.52	-1.3
3,956,374	+		LRK53_RS18005	0.63	+1.6
3,956,374	+		LRK53_RS18005	0.63	-0.9
3,956,374	+		LRK53_RS18005	0.63	-1.4
3,956,374	+		LRK53_RS18005	0.63	-0.2
3,956,374	+		LRK53_RS18005	0.63	+0.3
3,956,374	+		LRK53_RS18005	0.63	-0.9
3,956,374	+		LRK53_RS18005	0.63	-0.8
3,956,374	+		LRK53_RS18005	0.63	-0.4
3,956,374	+		LRK53_RS18005	0.63	-2.3
3,956,374	+		LRK53_RS18005	0.63	-1.3
3,956,374	+		LRK53_RS18005	0.63	-1.2
3,956,375	-		LRK53_RS18005	0.63	-0.6
3,956,375	-		LRK53_RS18005	0.63	-0.4
3,956,375	-		LRK53_RS18005	0.63	+0.0
3,956,375	-		LRK53_RS18005	0.63	-0.4
3,956,375	-		LRK53_RS18005	0.63	-1.4
3,956,375	-		LRK53_RS18005	0.63	-0.6
3,956,375	-		LRK53_RS18005	0.63	-0.4
3,956,375	-		LRK53_RS18005	0.63	+0.1
3,956,375	-		LRK53_RS18005	0.63	-0.7
3,956,375	-		LRK53_RS18005	0.63	+0.6
3,956,375	-		LRK53_RS18005	0.63	-1.7
3,956,375	-		LRK53_RS18005	0.63	-0.6
3,956,375	-		LRK53_RS18005	0.63	-0.1
3,956,375	-		LRK53_RS18005	0.63	-1.0
3,956,375	-		LRK53_RS18005	0.63	+0.6
3,956,375	-		LRK53_RS18005	0.63	+0.1
3,956,375	-		LRK53_RS18005	0.63	-1.2
3,956,376	+		LRK53_RS18005	0.63	-0.7
3,956,562	+		LRK53_RS18005	0.71	-1.2
3,956,562	+		LRK53_RS18005	0.71	+0.2
3,956,562	+		LRK53_RS18005	0.71	+0.1
3,956,562	+		LRK53_RS18005	0.71	+0.6
3,956,562	+		LRK53_RS18005	0.71	+0.1
3,956,562	+		LRK53_RS18005	0.71	-0.4
3,956,562	+		LRK53_RS18005	0.71	+0.5
3,956,562	+		LRK53_RS18005	0.71	+1.1
3,956,562	+		LRK53_RS18005	0.71	-1.9
3,956,562	+		LRK53_RS18005	0.71	-1.8
3,956,562	+		LRK53_RS18005	0.71	-0.1
3,956,562	+		LRK53_RS18005	0.71	-2.6
3,956,563	-		LRK53_RS18005	0.71	-0.9
3,956,563	-		LRK53_RS18005	0.71	+0.1
3,956,563	-		LRK53_RS18005	0.71	-1.2
3,956,563	-		LRK53_RS18005	0.71	-0.9
3,956,563	-		LRK53_RS18005	0.71	-0.8
3,956,563	-		LRK53_RS18005	0.71	-0.4
3,956,563	-		LRK53_RS18005	0.71	-0.4
3,956,563	-		LRK53_RS18005	0.71	+1.1
3,956,563	-		LRK53_RS18005	0.71	+1.1
3,956,565	+		LRK53_RS18005	0.71	-1.4
3,956,565	+		LRK53_RS18005	0.71	+1.1
3,956,565	+		LRK53_RS18005	0.71	-0.4
3,956,565	+		LRK53_RS18005	0.71	-0.6
3,956,565	+		LRK53_RS18005	0.71	+0.1
3,956,565	+		LRK53_RS18005	0.71	-1.0
3,956,565	+		LRK53_RS18005	0.71	+0.1
3,956,566	-		LRK53_RS18005	0.71	+0.6
3,956,566	-		LRK53_RS18005	0.71	-1.2
3,956,566	-		LRK53_RS18005	0.71	-0.4
3,956,566	-		LRK53_RS18005	0.71	-0.9
3,956,566	-		LRK53_RS18005	0.71	-1.3
3,956,566	-		LRK53_RS18005	0.71	+0.3
3,956,566	-		LRK53_RS18005	0.71	-0.3
3,956,566	-		LRK53_RS18005	0.71	+0.1
3,956,649	+		LRK53_RS18005	0.74	-0.1
3,956,649	+		LRK53_RS18005	0.74	+1.1
3,956,649	+		LRK53_RS18005	0.74	+1.1
3,956,650	-		LRK53_RS18005	0.74	-0.4
3,956,650	-		LRK53_RS18005	0.74	-0.6
3,956,650	-		LRK53_RS18005	0.74	-0.4
3,956,650	-		LRK53_RS18005	0.74	+0.4
3,956,820	+		LRK53_RS18005	0.81	-0.9
3,956,820	+		LRK53_RS18005	0.81	-0.4
3,956,820	+		LRK53_RS18005	0.81	-0.6
3,956,820	+		LRK53_RS18005	0.81	-1.2
3,956,821	-		LRK53_RS18005	0.81	-0.3
3,956,821	-		LRK53_RS18005	0.81	-0.1
3,956,989	-		LRK53_RS18005	0.88	+0.1
3,956,989	-		LRK53_RS18005	0.88	-0.9
3,957,003	+		LRK53_RS18005	0.89	-0.4
3,957,004	-		LRK53_RS18005	0.89	-0.9
3,957,004	-		LRK53_RS18005	0.89	-1.7
3,957,286	-				-0.9
3,957,286	-				-1.6
3,957,353	+				+0.6
3,957,353	+				-1.2
3,957,383	+				-1.3
3,957,383	+				-0.4
3,957,383	+				+0.6
3,957,383	+				-1.2
3,957,383	+				-0.9
3,957,383	+				-0.8
3,957,383	+				+1.1
3,957,383	+				-0.7
3,957,383	+				+1.1
3,957,392	+				+1.1
3,957,392	+				+0.7
3,957,392	+				-0.4
3,957,392	+				-0.2
3,957,393	-				+1.1
3,957,422	+		LRK53_RS18010	0.15	+0.4
3,957,422	+		LRK53_RS18010	0.15	-0.9
3,957,422	+		LRK53_RS18010	0.15	+0.4
3,957,423	-		LRK53_RS18010	0.15	-1.8
3,957,423	-		LRK53_RS18010	0.15	+1.1
3,957,423	-		LRK53_RS18010	0.15	-0.9
3,957,423	-		LRK53_RS18010	0.15	+0.4
3,957,423	-		LRK53_RS18010	0.15	-0.9
3,957,458	+		LRK53_RS18010	0.23	-0.4
3,957,458	+		LRK53_RS18010	0.23	+0.6
3,957,458	+		LRK53_RS18010	0.23	+0.2
3,957,459	-		LRK53_RS18010	0.23	-0.7
3,957,459	-		LRK53_RS18010	0.23	+0.7
3,957,512	+		LRK53_RS18010	0.34	-0.2
3,957,512	+		LRK53_RS18010	0.34	+0.4
3,957,512	+		LRK53_RS18010	0.34	-0.9
3,957,512	+		LRK53_RS18010	0.34	-0.9
3,957,513	-		LRK53_RS18010	0.35	+1.1
3,957,513	-		LRK53_RS18010	0.35	+0.6
3,957,513	-		LRK53_RS18010	0.35	-1.0
3,957,513	-		LRK53_RS18010	0.35	-2.3
3,957,513	-		LRK53_RS18010	0.35	+2.1
3,957,513	-		LRK53_RS18010	0.35	-2.8
3,957,513	-		LRK53_RS18010	0.35	-0.9
3,957,513	-		LRK53_RS18010	0.35	+0.4
3,957,557	+		LRK53_RS18010	0.44	-0.9
3,957,557	+		LRK53_RS18010	0.44	-0.1
3,957,557	+		LRK53_RS18010	0.44	-0.9
3,957,557	+		LRK53_RS18010	0.44	-1.4
3,957,558	-		LRK53_RS18010	0.44	-1.2
3,957,558	-		LRK53_RS18010	0.44	-0.2
3,957,558	-		LRK53_RS18010	0.44	-0.7
3,957,558	-		LRK53_RS18010	0.44	-1.4
3,957,558	-		LRK53_RS18010	0.44	+0.4
3,957,608	+		LRK53_RS18010	0.55	-0.7
3,957,608	+		LRK53_RS18010	0.55	-1.4
3,957,608	+		LRK53_RS18010	0.55	-0.2
3,957,608	+		LRK53_RS18010	0.55	-0.1
3,957,608	+		LRK53_RS18010	0.55	+1.1
3,957,608	+		LRK53_RS18010	0.55	-0.1
3,957,609	-		LRK53_RS18010	0.55	+0.6
3,957,609	-		LRK53_RS18010	0.55	+0.7
3,957,609	-		LRK53_RS18010	0.55	-2.3
3,957,609	-		LRK53_RS18010	0.55	-1.2
3,957,609	-		LRK53_RS18010	0.55	-1.6
3,957,609	-		LRK53_RS18010	0.55	+1.1
3,957,620	-		LRK53_RS18010	0.58	-0.1
3,957,659	+		LRK53_RS18010	0.66	+0.1
3,957,659	+		LRK53_RS18010	0.66	-0.4
3,957,659	+		LRK53_RS18010	0.66	+0.3
3,957,660	-		LRK53_RS18010	0.66	+2.7
3,957,660	-		LRK53_RS18010	0.66	+0.6
3,957,660	-		LRK53_RS18010	0.66	-0.0
3,957,660	-		LRK53_RS18010	0.66	+1.1
3,957,878	-				-1.4
3,958,169	-				-0.2