Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13990

Experiment: defined media with D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with D-Glucose
3,077,746	+		LRK53_RS13980	0.87	+0.9
3,077,746	+		LRK53_RS13980	0.87	+0.3
3,077,746	+		LRK53_RS13980	0.87	-0.7
3,077,747	-		LRK53_RS13980	0.88	-0.7
3,077,747	-		LRK53_RS13980	0.88	+0.6
3,078,008	+				-0.7
3,078,008	+				-1.0
3,078,008	+				+1.3
3,078,008	+				-0.7
3,078,009	-				-0.4
3,078,009	-				-0.1
3,078,009	-				-0.1
3,078,009	-				-0.7
3,078,009	-				+1.9
3,078,009	-				-1.4
3,078,017	-				-0.3
3,078,031	+				-0.1
3,078,031	+				+1.3
3,078,031	+				-2.2
3,078,031	+				-1.2
3,078,031	+				-1.9
3,078,031	+				-0.3
3,078,031	+				+1.5
3,078,031	+				-0.9
3,078,031	+				-0.6
3,078,031	+				-0.1
3,078,031	+				-0.7
3,078,031	+				-0.2
3,078,031	+				-1.1
3,078,032	-				+1.9
3,078,032	-				-0.9
3,078,032	-				+0.5
3,078,032	-				-0.3
3,078,032	-				-1.5
3,078,032	-				-0.1
3,078,032	-				-1.4
3,078,032	-				-0.4
3,078,032	-				-1.9
3,078,096	+				+0.2
3,078,096	+				-1.9
3,078,096	+				-0.4
3,078,097	-				-0.1
3,078,097	-				-0.1
3,078,097	-				-1.4
3,078,097	-				-2.5
3,078,097	-				-1.1
3,078,097	-				-2.0
3,078,097	-				-1.3
3,078,111	+				-0.7
3,078,112	-				-0.1
3,078,112	-				-0.1
3,078,112	-				-0.0
3,078,176	+		LRK53_RS13985	0.13	-0.9
3,078,177	-		LRK53_RS13985	0.13	-1.0
3,078,177	-		LRK53_RS13985	0.13	-0.7
3,078,256	+		LRK53_RS13985	0.31	-1.3
3,078,256	+		LRK53_RS13985	0.31	+0.9
3,078,256	+		LRK53_RS13985	0.31	+0.3
3,078,256	+		LRK53_RS13985	0.31	-1.7
3,078,257	-		LRK53_RS13985	0.31	-2.4
3,078,257	-		LRK53_RS13985	0.31	-1.4
3,078,257	-		LRK53_RS13985	0.31	-0.7
3,078,257	-		LRK53_RS13985	0.31	-0.4
3,078,257	-		LRK53_RS13985	0.31	-2.7
3,078,302	+		LRK53_RS13985	0.41	+0.1
3,078,302	+		LRK53_RS13985	0.41	+2.3
3,078,302	+		LRK53_RS13985	0.41	-1.9
3,078,302	+		LRK53_RS13985	0.41	-1.4
3,078,302	+		LRK53_RS13985	0.41	-1.7
3,078,303	-		LRK53_RS13985	0.41	-0.1
3,078,303	-		LRK53_RS13985	0.41	-1.4
3,078,303	-		LRK53_RS13985	0.41	-1.0
3,078,341	-		LRK53_RS13985	0.50	-1.4
3,078,540	+				-0.1
3,078,540	+				-2.4
3,078,541	-				-0.6
3,078,541	-				-1.7
3,078,612	+				+0.3
3,078,613	-				-0.1
3,078,613	-				-0.7
3,078,626	+				-2.1
3,078,626	+				-0.1
3,078,626	+				-0.4
3,078,626	+				-1.4
3,078,626	+				+0.7
3,078,627	-				-0.2
3,078,627	-				+0.2
3,078,627	-				-1.7
3,078,631	+				-0.1
3,078,631	+				-0.5
3,078,631	+				-1.2
3,078,631	+				-1.1
3,078,631	+				-0.5
3,078,631	+				-1.6
3,078,631	+				-0.9
3,078,631	+				-1.2
3,078,632	-				+0.9
3,078,930	-		LRK53_RS13990	0.18	-2.1
3,078,930	-		LRK53_RS13990	0.18	+0.3
3,079,214	+		LRK53_RS13990	0.40	-0.9
3,079,214	+		LRK53_RS13990	0.40	-1.4
3,079,214	+		LRK53_RS13990	0.40	-1.4
3,079,214	+		LRK53_RS13990	0.40	-0.4
3,079,214	+		LRK53_RS13990	0.40	+0.3
3,079,214	+		LRK53_RS13990	0.40	-0.1
3,079,214	+		LRK53_RS13990	0.40	-0.3
3,079,214	+		LRK53_RS13990	0.40	+1.9
3,079,215	-		LRK53_RS13990	0.40	+0.5
3,079,215	-		LRK53_RS13990	0.40	-0.1
3,079,248	+		LRK53_RS13990	0.42	-0.1
3,079,248	+		LRK53_RS13990	0.42	-1.7
3,079,248	+		LRK53_RS13990	0.42	-0.1
3,079,248	+		LRK53_RS13990	0.42	-1.6
3,079,248	+		LRK53_RS13990	0.42	-0.1
3,079,248	+		LRK53_RS13990	0.42	+1.9
3,079,248	+		LRK53_RS13990	0.42	-1.3
3,079,248	+		LRK53_RS13990	0.42	-0.9
3,079,248	+		LRK53_RS13990	0.42	-1.4
3,079,249	-		LRK53_RS13990	0.43	+0.3
3,079,249	-		LRK53_RS13990	0.43	-0.7
3,079,249	-		LRK53_RS13990	0.43	-0.5
3,079,249	-		LRK53_RS13990	0.43	-0.7
3,079,249	-		LRK53_RS13990	0.43	+0.6
3,079,249	-		LRK53_RS13990	0.43	+0.9
3,079,249	-		LRK53_RS13990	0.43	+0.3
3,079,249	-		LRK53_RS13990	0.43	-0.7
3,079,269	+		LRK53_RS13990	0.44	+0.2
3,079,269	+		LRK53_RS13990	0.44	-1.9
3,079,269	+		LRK53_RS13990	0.44	-0.1
3,079,269	+		LRK53_RS13990	0.44	+0.9
3,079,269	+		LRK53_RS13990	0.44	-0.2
3,079,269	+		LRK53_RS13990	0.44	-0.7
3,079,269	+		LRK53_RS13990	0.44	+1.9
3,079,269	+		LRK53_RS13990	0.44	+0.3
3,079,269	+		LRK53_RS13990	0.44	-2.4
3,079,269	+		LRK53_RS13990	0.44	+0.9
3,079,269	+		LRK53_RS13990	0.44	-0.1
3,079,269	+		LRK53_RS13990	0.44	+1.9
3,079,270	-		LRK53_RS13990	0.44	-0.1
3,079,270	-		LRK53_RS13990	0.44	-0.4
3,079,270	-		LRK53_RS13990	0.44	+0.9
3,079,270	-		LRK53_RS13990	0.44	-0.7
3,079,270	-		LRK53_RS13990	0.44	+1.9
3,079,270	-		LRK53_RS13990	0.44	-0.6
3,079,270	-		LRK53_RS13990	0.44	-0.1
3,079,270	-		LRK53_RS13990	0.44	-0.9
3,079,270	-		LRK53_RS13990	0.44	-0.6
3,079,329	+		LRK53_RS13990	0.49	+1.9
3,079,330	-		LRK53_RS13990	0.49	-1.0
3,079,330	-		LRK53_RS13990	0.49	+0.1
3,079,330	-		LRK53_RS13990	0.49	-1.1
3,079,330	-		LRK53_RS13990	0.49	-0.4
3,079,330	-		LRK53_RS13990	0.49	-1.1
3,079,330	-		LRK53_RS13990	0.49	-1.1
3,079,330	-		LRK53_RS13990	0.49	+0.3
3,079,332	+		LRK53_RS13990	0.49	-0.9
3,079,332	+		LRK53_RS13990	0.49	-0.7
3,079,332	+		LRK53_RS13990	0.49	-0.1
3,079,332	+		LRK53_RS13990	0.49	+0.9
3,079,332	+		LRK53_RS13990	0.49	-1.4
3,079,333	-		LRK53_RS13990	0.49	-1.4
3,079,333	-		LRK53_RS13990	0.49	+0.3
3,079,408	+		LRK53_RS13990	0.55	-0.7
3,079,408	+		LRK53_RS13990	0.55	-0.7
3,079,408	+		LRK53_RS13990	0.55	-0.9
3,079,409	-		LRK53_RS13990	0.55	-0.7
3,079,409	-		LRK53_RS13990	0.55	-1.9
3,079,409	-		LRK53_RS13990	0.55	-0.7
3,079,413	+		LRK53_RS13990	0.55	-1.1
3,079,548	+		LRK53_RS13990	0.65	-1.4
3,079,548	+		LRK53_RS13990	0.65	-1.4
3,079,548	+		LRK53_RS13990	0.65	-2.5
3,079,548	+		LRK53_RS13990	0.65	-0.4
3,079,548	+		LRK53_RS13990	0.65	-1.0
3,079,548	+		LRK53_RS13990	0.65	-0.1
3,079,549	-		LRK53_RS13990	0.65	-1.4
3,079,549	-		LRK53_RS13990	0.65	-1.7
3,079,549	-		LRK53_RS13990	0.65	-0.4
3,079,549	-		LRK53_RS13990	0.65	+0.9
3,079,606	-		LRK53_RS13990	0.70	-1.5
3,079,734	+		LRK53_RS13990	0.79	-0.4
3,079,734	+		LRK53_RS13990	0.79	-0.5
3,079,734	+		LRK53_RS13990	0.79	-1.1
3,079,734	+		LRK53_RS13990	0.79	-1.1
3,079,734	+		LRK53_RS13990	0.79	-1.1
3,079,734	+		LRK53_RS13990	0.79	-1.0
3,079,734	+		LRK53_RS13990	0.79	-1.4
3,079,734	+		LRK53_RS13990	0.79	-0.1
3,079,735	-		LRK53_RS13990	0.79	-0.9
3,079,735	-		LRK53_RS13990	0.79	+0.9
3,079,735	-		LRK53_RS13990	0.79	-1.4
3,079,735	-		LRK53_RS13990	0.79	+2.5
3,079,735	-		LRK53_RS13990	0.79	-0.4
3,079,735	-		LRK53_RS13990	0.79	-0.9
3,079,735	-		LRK53_RS13990	0.79	+0.9
3,079,735	-		LRK53_RS13990	0.79	-0.1
3,079,911	+				-0.4
3,079,911	+				-0.1
3,079,911	+				+1.9
3,079,974	+				+0.6
3,079,974	+				-0.7
3,079,974	+				-0.1
3,079,974	+				+0.5
3,079,974	+				-0.7
3,079,975	-				-0.7
3,079,975	-				+0.9
3,079,975	-				-0.3
3,079,975	-				-0.4
3,079,975	-				-0.3
3,079,975	-				-0.4
3,079,975	-				-0.5
3,080,000	+				-0.2
3,080,000	+				-0.4
3,080,000	+				-0.1
3,080,001	-				-3.1
3,080,001	-				+0.1
3,080,014	+				-2.5
3,080,014	+				-1.9
3,080,089	+				-0.1
3,080,089	+				+0.3
3,080,089	+				-0.9
3,080,089	+				-0.4
3,080,090	-				-0.7
3,080,107	+				+0.0
3,080,107	+				-0.1
3,080,107	+				-1.3
3,080,108	-				+0.3
3,080,108	-				-1.2
3,080,108	-				-1.4
3,080,108	-				-0.7
3,080,108	-				-0.1
3,080,108	-				-0.5
3,080,108	-				-0.5
3,080,131	+		LRK53_RS13995	0.15	-1.4
3,080,131	+		LRK53_RS13995	0.15	+0.9
3,080,131	+		LRK53_RS13995	0.15	-0.1
3,080,131	+		LRK53_RS13995	0.15	-1.1
3,080,132	-		LRK53_RS13995	0.16	-0.3
3,080,132	-		LRK53_RS13995	0.16	+2.5
3,080,182	+		LRK53_RS13995	0.28	+0.6
3,080,182	+		LRK53_RS13995	0.28	-0.9
3,080,182	+		LRK53_RS13995	0.28	-0.1
3,080,183	-		LRK53_RS13995	0.28	+0.6
3,080,183	-		LRK53_RS13995	0.28	-1.2
3,080,183	-		LRK53_RS13995	0.28	-1.0
3,080,183	-		LRK53_RS13995	0.28	-0.7
3,080,183	-		LRK53_RS13995	0.28	+0.9
3,080,183	-		LRK53_RS13995	0.28	+0.1
3,080,183	-		LRK53_RS13995	0.28	+0.5
3,080,183	-		LRK53_RS13995	0.28	-0.7
3,080,206	+		LRK53_RS13995	0.34	+0.3
3,080,206	+		LRK53_RS13995	0.34	-0.9
3,080,206	+		LRK53_RS13995	0.34	-2.5
3,080,206	+		LRK53_RS13995	0.34	-1.3
3,080,206	+		LRK53_RS13995	0.34	+0.9
3,080,206	+		LRK53_RS13995	0.34	-0.6
3,080,206	+		LRK53_RS13995	0.34	-0.9
3,080,207	-		LRK53_RS13995	0.34	-0.3
3,080,207	-		LRK53_RS13995	0.34	-0.4
3,080,207	-		LRK53_RS13995	0.34	-1.7
3,080,207	-		LRK53_RS13995	0.34	-1.7
3,080,207	-		LRK53_RS13995	0.34	-0.2
3,080,224	+		LRK53_RS13995	0.38	-1.1
3,080,224	+		LRK53_RS13995	0.38	-0.7
3,080,224	+		LRK53_RS13995	0.38	-0.7
3,080,224	+		LRK53_RS13995	0.38	-0.1
3,080,224	+		LRK53_RS13995	0.38	+0.9
3,080,224	+		LRK53_RS13995	0.38	-0.1
3,080,225	-		LRK53_RS13995	0.38	-1.1
3,080,225	-		LRK53_RS13995	0.38	-1.1
3,080,225	-		LRK53_RS13995	0.38	+1.4
3,080,225	-		LRK53_RS13995	0.38	+0.3
3,080,225	-		LRK53_RS13995	0.38	-0.4
3,080,225	-		LRK53_RS13995	0.38	-0.3
3,080,225	-		LRK53_RS13995	0.38	+0.9
3,080,225	-		LRK53_RS13995	0.38	-1.1
3,080,225	-		LRK53_RS13995	0.38	-1.3
3,080,225	-		LRK53_RS13995	0.38	+0.4
3,080,225	-		LRK53_RS13995	0.38	-0.7
3,080,225	-		LRK53_RS13995	0.38	-0.8
3,080,225	-		LRK53_RS13995	0.38	-0.6
3,080,225	-		LRK53_RS13995	0.38	+0.9
3,080,227	+		LRK53_RS13995	0.39	-0.3
3,080,227	+		LRK53_RS13995	0.39	-0.1
3,080,227	+		LRK53_RS13995	0.39	-1.5
3,080,227	+		LRK53_RS13995	0.39	-0.7
3,080,227	+		LRK53_RS13995	0.39	-1.1
3,080,227	+		LRK53_RS13995	0.39	-0.3
3,080,227	+		LRK53_RS13995	0.39	+0.9
3,080,227	+		LRK53_RS13995	0.39	-0.7
3,080,227	+		LRK53_RS13995	0.39	-1.1
3,080,227	+		LRK53_RS13995	0.39	-0.6
3,080,227	+		LRK53_RS13995	0.39	-0.1
3,080,227	+		LRK53_RS13995	0.39	+0.2
3,080,227	+		LRK53_RS13995	0.39	-0.6
3,080,228	-		LRK53_RS13995	0.39	-2.1
3,080,228	-		LRK53_RS13995	0.39	+0.7
3,080,228	-		LRK53_RS13995	0.39	-0.7
3,080,228	-		LRK53_RS13995	0.39	-0.9
3,080,228	-		LRK53_RS13995	0.39	-0.5
3,080,228	-		LRK53_RS13995	0.39	-0.7
3,080,228	-		LRK53_RS13995	0.39	-0.4
3,080,228	-		LRK53_RS13995	0.39	-0.1
3,080,228	-		LRK53_RS13995	0.39	-0.1
3,080,332	+		LRK53_RS13995	0.64	-1.1
3,080,332	+		LRK53_RS13995	0.64	-1.7
3,080,332	+		LRK53_RS13995	0.64	+0.3
3,080,332	+		LRK53_RS13995	0.64	-0.1
3,080,333	-		LRK53_RS13995	0.64	-0.7
3,080,333	-		LRK53_RS13995	0.64	+0.2
3,080,333	-		LRK53_RS13995	0.64	+1.7
3,080,335	+		LRK53_RS13995	0.65	+0.2
3,080,335	+		LRK53_RS13995	0.65	-0.7
3,080,335	+		LRK53_RS13995	0.65	-0.7
3,080,335	+		LRK53_RS13995	0.65	-0.9
3,080,335	+		LRK53_RS13995	0.65	-1.3
3,080,336	-		LRK53_RS13995	0.65	-0.7
3,080,336	-		LRK53_RS13995	0.65	+0.2
3,080,336	-		LRK53_RS13995	0.65	+0.1
3,080,348	-		LRK53_RS13995	0.68	-0.7
3,080,356	+		LRK53_RS13995	0.70	-0.5
3,080,356	+		LRK53_RS13995	0.70	+0.3
3,080,356	+		LRK53_RS13995	0.70	+0.3
3,080,357	-		LRK53_RS13995	0.70	-0.7
3,080,357	-		LRK53_RS13995	0.70	-0.9
3,080,357	-		LRK53_RS13995	0.70	-0.1
3,080,357	-		LRK53_RS13995	0.70	-1.2
3,080,357	-		LRK53_RS13995	0.70	-2.2
3,080,496	+				+0.3
3,080,496	+				-0.6
3,080,496	+				-1.1
3,080,497	-				+0.0
3,080,497	-				+0.4
3,080,525	+				+0.6
3,080,525	+				-0.7
3,080,525	+				-0.2
3,080,525	+				+0.1
3,080,526	-				+1.9
3,080,526	-				-0.1
3,080,856	+		LRK53_RS14000	0.14	-0.8
3,080,856	+		LRK53_RS14000	0.14	-0.1
3,080,856	+		LRK53_RS14000	0.14	-0.7
3,080,856	+		LRK53_RS14000	0.14	-0.1
3,080,856	+		LRK53_RS14000	0.14	-0.8
3,080,856	+		LRK53_RS14000	0.14	-1.9
3,080,856	+		LRK53_RS14000	0.14	+0.3
3,080,856	+		LRK53_RS14000	0.14	-0.4
3,080,856	+		LRK53_RS14000	0.14	+0.2
3,080,856	+		LRK53_RS14000	0.14	+0.2
3,080,857	-		LRK53_RS14000	0.14	-0.9
3,080,857	-		LRK53_RS14000	0.14	+0.3
3,080,857	-		LRK53_RS14000	0.14	-0.1
3,080,857	-		LRK53_RS14000	0.14	-1.2
3,080,857	-		LRK53_RS14000	0.14	-1.1
3,080,857	-		LRK53_RS14000	0.14	-0.5
3,080,857	-		LRK53_RS14000	0.14	-0.5
3,080,857	-		LRK53_RS14000	0.14	-0.0
3,080,857	-		LRK53_RS14000	0.14	-1.3
3,080,857	-		LRK53_RS14000	0.14	-0.1
3,080,857	-		LRK53_RS14000	0.14	-0.1
3,080,857	-		LRK53_RS14000	0.14	-0.7
3,080,857	-		LRK53_RS14000	0.14	+0.3
3,080,857	-		LRK53_RS14000	0.14	+0.1
3,080,857	-		LRK53_RS14000	0.14	-0.4
3,080,857	-		LRK53_RS14000	0.14	-0.2
3,080,857	-		LRK53_RS14000	0.14	-0.3
3,080,976	+		LRK53_RS14000	0.20	-2.2
3,080,976	+		LRK53_RS14000	0.20	-0.5
3,080,976	+		LRK53_RS14000	0.20	+0.8
3,080,976	+		LRK53_RS14000	0.20	+1.5
3,080,976	+		LRK53_RS14000	0.20	-0.1
3,080,977	-		LRK53_RS14000	0.20	+0.9
3,080,977	-		LRK53_RS14000	0.20	-3.0
3,080,977	-		LRK53_RS14000	0.20	-0.3