Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17475

Experiment: defined media with D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with D-Glucose
3,833,937	+		LRK53_RS17465	0.87	+0.3
3,833,937	+		LRK53_RS17465	0.87	-0.4
3,833,937	+		LRK53_RS17465	0.87	+2.4
3,833,937	+		LRK53_RS17465	0.87	-1.5
3,833,937	+		LRK53_RS17465	0.87	-0.5
3,833,937	+		LRK53_RS17465	0.87	-0.9
3,833,937	+		LRK53_RS17465	0.87	-0.9
3,833,937	+		LRK53_RS17465	0.87	-0.3
3,833,938	-		LRK53_RS17465	0.87	+1.1
3,833,938	-		LRK53_RS17465	0.87	+0.5
3,833,962	+				-0.9
3,833,962	+				-1.5
3,833,962	+				+0.4
3,833,963	-				-0.6
3,833,963	-				-1.2
3,833,963	-				-0.4
3,833,983	+				-0.5
3,833,984	-				-0.3
3,833,984	-				-0.2
3,833,984	-				-1.5
3,834,289	+		LRK53_RS17470	0.36	-0.8
3,834,289	+		LRK53_RS17470	0.36	+0.1
3,834,290	-		LRK53_RS17470	0.37	+0.3
3,834,290	-		LRK53_RS17470	0.37	-0.5
3,834,421	+		LRK53_RS17470	0.57	-1.5
3,834,421	+		LRK53_RS17470	0.57	-0.5
3,834,421	+		LRK53_RS17470	0.57	-0.7
3,834,422	-		LRK53_RS17470	0.57	+0.1
3,834,422	-		LRK53_RS17470	0.57	-0.9
3,834,539	+		LRK53_RS17470	0.75	+1.1
3,834,539	+		LRK53_RS17470	0.75	-1.1
3,834,539	+		LRK53_RS17470	0.75	-0.5
3,834,539	+		LRK53_RS17470	0.75	-0.9
3,834,539	+		LRK53_RS17470	0.75	-0.3
3,834,539	+		LRK53_RS17470	0.75	-1.0
3,834,539	+		LRK53_RS17470	0.75	-0.4
3,834,539	+		LRK53_RS17470	0.75	-0.6
3,834,539	+		LRK53_RS17470	0.75	+0.3
3,834,539	+		LRK53_RS17470	0.75	-0.7
3,834,539	+		LRK53_RS17470	0.75	-0.1
3,834,539	+		LRK53_RS17470	0.75	-0.2
3,834,539	+		LRK53_RS17470	0.75	+0.7
3,834,539	+		LRK53_RS17470	0.75	-1.5
3,834,539	+		LRK53_RS17470	0.75	-1.5
3,834,539	+		LRK53_RS17470	0.75	-1.2
3,834,539	+		LRK53_RS17470	0.75	-1.0
3,834,539	+		LRK53_RS17470	0.75	-0.8
3,834,539	+		LRK53_RS17470	0.75	-0.2
3,834,539	+		LRK53_RS17470	0.75	-0.7
3,834,539	+		LRK53_RS17470	0.75	+0.4
3,834,539	+		LRK53_RS17470	0.75	-1.0
3,834,539	+		LRK53_RS17470	0.75	-0.5
3,834,539	+		LRK53_RS17470	0.75	-1.2
3,834,540	-		LRK53_RS17470	0.75	-1.5
3,834,540	-		LRK53_RS17470	0.75	-0.5
3,834,540	-		LRK53_RS17470	0.75	+0.4
3,834,540	-		LRK53_RS17470	0.75	-0.9
3,834,540	-		LRK53_RS17470	0.75	-1.2
3,834,540	-		LRK53_RS17470	0.75	-0.9
3,834,540	-		LRK53_RS17470	0.75	-0.0
3,834,540	-		LRK53_RS17470	0.75	+0.5
3,834,540	-		LRK53_RS17470	0.75	+0.7
3,834,540	-		LRK53_RS17470	0.75	+0.1
3,834,540	-		LRK53_RS17470	0.75	-0.5
3,834,540	-		LRK53_RS17470	0.75	-0.9
3,834,540	-		LRK53_RS17470	0.75	-1.0
3,834,540	-		LRK53_RS17470	0.75	+2.1
3,834,540	-		LRK53_RS17470	0.75	-1.7
3,834,540	-		LRK53_RS17470	0.75	+1.1
3,834,540	-		LRK53_RS17470	0.75	-1.5
3,834,540	-		LRK53_RS17470	0.75	-0.9
3,834,540	-		LRK53_RS17470	0.75	-2.6
3,834,540	-		LRK53_RS17470	0.75	-0.1
3,834,540	-		LRK53_RS17470	0.75	-2.0
3,834,540	-		LRK53_RS17470	0.75	+1.1
3,834,540	-		LRK53_RS17470	0.75	+0.1
3,834,693	+				+1.1
3,834,694	-				+0.3
3,835,001	+		LRK53_RS17475	0.54	-1.4
3,835,001	+		LRK53_RS17475	0.54	-2.8
3,835,001	+		LRK53_RS17475	0.54	+0.1
3,835,001	+		LRK53_RS17475	0.54	-0.8
3,835,001	+		LRK53_RS17475	0.54	-0.5
3,835,001	+		LRK53_RS17475	0.54	-1.0
3,835,001	+		LRK53_RS17475	0.54	-1.0
3,835,001	+		LRK53_RS17475	0.54	-1.0
3,835,001	+		LRK53_RS17475	0.54	-0.2
3,835,001	+		LRK53_RS17475	0.54	+0.8
3,835,001	+		LRK53_RS17475	0.54	+1.1
3,835,001	+		LRK53_RS17475	0.54	-0.2
3,835,001	+		LRK53_RS17475	0.54	-0.6
3,835,001	+		LRK53_RS17475	0.54	-1.7
3,835,001	+		LRK53_RS17475	0.54	+0.1
3,835,001	+		LRK53_RS17475	0.54	+0.5
3,835,001	+		LRK53_RS17475	0.54	+2.1
3,835,001	+		LRK53_RS17475	0.54	+1.1
3,835,001	+		LRK53_RS17475	0.54	-1.2
3,835,001	+		LRK53_RS17475	0.54	-2.2
3,835,001	+		LRK53_RS17475	0.54	-0.5
3,835,002	-		LRK53_RS17475	0.55	+1.1
3,835,002	-		LRK53_RS17475	0.55	+0.1
3,835,002	-		LRK53_RS17475	0.55	-1.7
3,835,002	-		LRK53_RS17475	0.55	-0.9
3,835,002	-		LRK53_RS17475	0.55	-0.3
3,835,002	-		LRK53_RS17475	0.55	-0.5
3,835,002	-		LRK53_RS17475	0.55	-0.5
3,835,002	-		LRK53_RS17475	0.55	-1.5
3,835,002	-		LRK53_RS17475	0.55	-0.5
3,835,002	-		LRK53_RS17475	0.55	-1.0
3,835,055	+		LRK53_RS17475	0.83	+1.1
3,835,055	+		LRK53_RS17475	0.83	-2.7
3,835,056	-		LRK53_RS17475	0.84	-0.5
3,835,115	+				-1.1
3,835,115	+				+0.5
3,835,115	+				+0.1
3,835,115	+				-0.5
3,835,116	-				-1.0
3,835,116	-				-0.4
3,835,116	-				+0.4
3,835,131	-				+0.5
3,835,161	-				+0.1
3,835,433	+		LRK53_RS17480	0.62	+1.7
3,835,640	+				-0.5
3,835,640	+				-0.9
3,835,640	+				-0.5
3,835,640	+				+0.3
3,835,641	-				-0.5
3,835,641	-				+1.1
3,835,641	-				-0.5
3,835,701	+				+0.2
3,835,701	+				-1.2
3,835,701	+				+0.5
3,835,701	+				-0.5
3,835,701	+				+0.1
3,835,702	-				+1.1
3,835,702	-				+1.1
3,835,740	+		LRK53_RS17485	0.25	+1.1
3,835,788	+		LRK53_RS17485	0.44	-1.4
3,835,788	+		LRK53_RS17485	0.44	-0.2
3,835,788	+		LRK53_RS17485	0.44	+0.7
3,835,788	+		LRK53_RS17485	0.44	-0.5
3,835,788	+		LRK53_RS17485	0.44	-0.1
3,835,788	+		LRK53_RS17485	0.44	-2.0
3,835,788	+		LRK53_RS17485	0.44	-0.9
3,835,788	+		LRK53_RS17485	0.44	+0.1
3,835,788	+		LRK53_RS17485	0.44	+0.8
3,835,788	+		LRK53_RS17485	0.44	+0.6
3,835,789	-		LRK53_RS17485	0.44	-1.7
3,835,789	-		LRK53_RS17485	0.44	-3.9
3,835,789	-		LRK53_RS17485	0.44	+0.0
3,835,789	-		LRK53_RS17485	0.44	+1.1
3,835,789	-		LRK53_RS17485	0.44	+0.5
3,835,789	-		LRK53_RS17485	0.44	+0.1
3,835,789	-		LRK53_RS17485	0.44	-0.1
3,835,789	-		LRK53_RS17485	0.44	-1.4
3,835,789	-		LRK53_RS17485	0.44	-1.1
3,835,789	-		LRK53_RS17485	0.44	-0.3
3,835,789	-		LRK53_RS17485	0.44	-0.1
3,835,789	-		LRK53_RS17485	0.44	-0.9
3,835,791	+		LRK53_RS17485	0.45	-1.0
3,835,791	+		LRK53_RS17485	0.45	-1.0
3,835,791	+		LRK53_RS17485	0.45	-0.0
3,835,791	+		LRK53_RS17485	0.45	-0.5
3,835,792	-		LRK53_RS17485	0.45	-1.2
3,835,911	+				-1.3
3,835,911	+				+0.1
3,835,911	+				-0.5
3,835,911	+				-0.9
3,835,911	+				-0.4
3,835,912	-				-1.2
3,835,912	-				+1.1
3,835,912	-				+0.1
3,835,912	-				-1.3
3,835,912	-				-1.1
3,835,912	-				-1.1
3,835,958	-				-0.9