Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08490

Experiment: defined media with D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with D-Glucose
1,905,845	+				-0.8
1,905,845	+				-3.3
1,905,845	+				-2.4
1,905,845	+				-2.2
1,905,845	+				-1.2
1,905,845	+				-2.8
1,905,845	+				-2.2
1,905,845	+				-2.8
1,905,845	+				-0.2
1,905,845	+				-1.0
1,905,845	+				-2.9
1,905,846	-				-3.3
1,905,931	+		LRK53_RS08485	0.19	-2.4
1,905,931	+		LRK53_RS08485	0.19	-3.3
1,905,931	+		LRK53_RS08485	0.19	-0.2
1,905,932	-		LRK53_RS08485	0.19	-0.2
1,905,932	-		LRK53_RS08485	0.19	-1.2
1,905,932	-		LRK53_RS08485	0.19	-1.8
1,905,932	-		LRK53_RS08485	0.19	+0.4
1,906,213	+		LRK53_RS08485	0.55	-3.5
1,906,214	-		LRK53_RS08485	0.55	-2.5
1,906,214	-		LRK53_RS08485	0.55	-4.3
1,906,214	-		LRK53_RS08485	0.55	-1.5
1,906,214	-		LRK53_RS08485	0.55	-2.7
1,906,342	+		LRK53_RS08485	0.72	-0.2
1,906,502	+				-0.8
1,906,502	+				-3.7
1,906,502	+				-2.0
1,906,519	+				-0.2
1,906,519	+				-0.8
1,906,519	+				-0.3
1,906,519	+				-0.2
1,906,519	+				-1.4
1,906,520	-				-0.9
1,906,520	-				-1.1
1,906,520	-				-1.0
1,906,520	-				-1.5
1,906,520	-				-1.5
1,906,545	-				-3.0
1,906,551	+				-0.8
1,906,551	+				+0.5
1,906,551	+				+0.8
1,906,551	+				-1.4
1,906,551	+				-0.8
1,906,552	-				-1.2
1,906,552	-				+0.5
1,906,552	-				+0.8
1,906,552	-				-0.8
1,906,552	-				+1.8
1,906,552	-				+0.8
1,906,552	-				-1.5
1,906,558	+				+0.4
1,906,559	-				-0.7
1,906,559	-				+0.8
1,906,559	-				-2.5
1,906,752	+		LRK53_RS08490	0.17	-1.5
1,906,752	+		LRK53_RS08490	0.17	-1.2
1,906,752	+		LRK53_RS08490	0.17	-0.8
1,906,753	-		LRK53_RS08490	0.17	-0.8
1,906,753	-		LRK53_RS08490	0.17	-1.2
1,906,753	-		LRK53_RS08490	0.17	-0.2
1,906,753	-		LRK53_RS08490	0.17	-1.7
1,906,806	+		LRK53_RS08490	0.26	-0.2
1,906,806	+		LRK53_RS08490	0.26	-2.6
1,906,806	+		LRK53_RS08490	0.26	-0.2
1,906,806	+		LRK53_RS08490	0.26	-4.7
1,906,806	+		LRK53_RS08490	0.26	-1.8
1,906,806	+		LRK53_RS08490	0.26	+0.8
1,906,806	+		LRK53_RS08490	0.26	-2.8
1,906,807	-		LRK53_RS08490	0.26	-2.2
1,906,807	-		LRK53_RS08490	0.26	-0.8
1,906,807	-		LRK53_RS08490	0.26	-2.5
1,906,807	-		LRK53_RS08490	0.26	-0.2
1,906,807	-		LRK53_RS08490	0.26	-0.8
1,907,049	+		LRK53_RS08490	0.65	-0.8
1,907,049	+		LRK53_RS08490	0.65	-0.4
1,907,049	+		LRK53_RS08490	0.65	-1.2
1,907,049	+		LRK53_RS08490	0.65	+0.8
1,907,050	-		LRK53_RS08490	0.65	-0.8
1,907,050	-		LRK53_RS08490	0.65	-2.3
1,907,050	-		LRK53_RS08490	0.65	+0.8
1,907,050	-		LRK53_RS08490	0.65	-2.5
1,907,050	-		LRK53_RS08490	0.65	+0.2
1,907,050	-		LRK53_RS08490	0.65	+0.8
1,907,050	-		LRK53_RS08490	0.65	-2.9
1,907,050	-		LRK53_RS08490	0.65	-0.2
1,907,050	-		LRK53_RS08490	0.65	-1.2
1,907,050	-		LRK53_RS08490	0.65	-1.2
1,907,050	-		LRK53_RS08490	0.65	-3.7
1,907,279	-				+0.4
1,907,527	+		LRK53_RS08495	0.25	-0.2
1,907,527	+		LRK53_RS08495	0.25	-0.5
1,907,527	+		LRK53_RS08495	0.25	+2.4
1,907,527	+		LRK53_RS08495	0.25	+0.8
1,907,527	+		LRK53_RS08495	0.25	-1.2
1,907,527	+		LRK53_RS08495	0.25	+1.8
1,907,527	+		LRK53_RS08495	0.25	-2.2
1,907,527	+		LRK53_RS08495	0.25	-1.5
1,907,528	-		LRK53_RS08495	0.25	-0.2
1,907,528	-		LRK53_RS08495	0.25	+0.4
1,907,528	-		LRK53_RS08495	0.25	-0.8
1,907,635	+		LRK53_RS08495	0.36	+0.8
1,907,636	-		LRK53_RS08495	0.36	-0.2
1,907,636	-		LRK53_RS08495	0.36	-0.8
1,907,636	-		LRK53_RS08495	0.36	+0.8
1,907,779	+		LRK53_RS08495	0.50	+1.2
1,907,779	+		LRK53_RS08495	0.50	-0.3
1,907,779	+		LRK53_RS08495	0.50	-1.1
1,907,779	+		LRK53_RS08495	0.50	+0.3
1,907,779	+		LRK53_RS08495	0.50	+0.6
1,907,779	+		LRK53_RS08495	0.50	-0.8
1,907,779	+		LRK53_RS08495	0.50	-0.2
1,907,779	+		LRK53_RS08495	0.50	-0.8
1,907,779	+		LRK53_RS08495	0.50	-1.0
1,907,780	-		LRK53_RS08495	0.50	-0.2
1,907,780	-		LRK53_RS08495	0.50	+0.0
1,907,780	-		LRK53_RS08495	0.50	-0.2
1,907,780	-		LRK53_RS08495	0.50	-0.5
1,907,780	-		LRK53_RS08495	0.50	-1.9
1,907,950	+		LRK53_RS08495	0.67	-1.3
1,907,970	+		LRK53_RS08495	0.69	-1.2
1,907,970	+		LRK53_RS08495	0.69	+1.4
1,907,970	+		LRK53_RS08495	0.69	-1.0
1,907,970	+		LRK53_RS08495	0.69	+1.1
1,907,970	+		LRK53_RS08495	0.69	-0.2
1,907,970	+		LRK53_RS08495	0.69	-0.9
1,907,970	+		LRK53_RS08495	0.69	-0.5
1,907,971	-		LRK53_RS08495	0.69	-0.2
1,907,971	-		LRK53_RS08495	0.69	-1.0
1,907,971	-		LRK53_RS08495	0.69	+0.4
1,907,971	-		LRK53_RS08495	0.69	-0.5
1,907,971	-		LRK53_RS08495	0.69	-1.3
1,907,971	-		LRK53_RS08495	0.69	-0.9
1,907,971	-		LRK53_RS08495	0.69	-1.1
1,908,007	+		LRK53_RS08495	0.73	-0.5
1,908,007	+		LRK53_RS08495	0.73	-0.2
1,908,007	+		LRK53_RS08495	0.73	-1.5
1,908,007	+		LRK53_RS08495	0.73	-1.0
1,908,007	+		LRK53_RS08495	0.73	+0.2
1,908,007	+		LRK53_RS08495	0.73	-1.5
1,908,008	-		LRK53_RS08495	0.73	-0.1
1,908,008	-		LRK53_RS08495	0.73	+0.4
1,908,008	-		LRK53_RS08495	0.73	-1.5
1,908,008	-		LRK53_RS08495	0.73	+0.2
1,908,008	-		LRK53_RS08495	0.73	-0.5
1,908,008	-		LRK53_RS08495	0.73	-2.7
1,908,008	-		LRK53_RS08495	0.73	-0.3
1,908,028	-		LRK53_RS08495	0.75	-0.2
1,908,079	+		LRK53_RS08495	0.80	-2.2
1,908,079	+		LRK53_RS08495	0.80	+0.2
1,908,079	+		LRK53_RS08495	0.80	-0.8
1,908,079	+		LRK53_RS08495	0.80	-1.0
1,908,079	+		LRK53_RS08495	0.80	-0.7
1,908,079	+		LRK53_RS08495	0.80	+1.8
1,908,079	+		LRK53_RS08495	0.80	-0.3
1,908,079	+		LRK53_RS08495	0.80	+0.8
1,908,080	-		LRK53_RS08495	0.80	+1.2
1,908,080	-		LRK53_RS08495	0.80	-1.5
1,908,080	-		LRK53_RS08495	0.80	+0.0
1,908,080	-		LRK53_RS08495	0.80	+0.8
1,908,080	-		LRK53_RS08495	0.80	-0.8
1,908,080	-		LRK53_RS08495	0.80	-0.9
1,908,080	-		LRK53_RS08495	0.80	+0.5
1,908,080	-		LRK53_RS08495	0.80	-0.3