Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06800

Experiment: defined media with D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with D-Glucose
1,536,260	+		LRK53_RS06795	0.62	-2.0
1,536,296	+		LRK53_RS06795	0.65	-0.1
1,536,296	+		LRK53_RS06795	0.65	-1.1
1,536,297	-		LRK53_RS06795	0.65	-4.7
1,536,358	-		LRK53_RS06795	0.70	-1.7
1,536,420	-		LRK53_RS06795	0.75	-2.1
1,536,697	+				-1.7
1,536,697	+				-2.1
1,536,697	+				-0.7
1,536,697	+				-0.1
1,536,697	+				-2.8
1,536,697	+				-1.1
1,536,697	+				-0.7
1,536,697	+				-1.5
1,536,697	+				-0.1
1,536,697	+				-2.2
1,536,698	-				-2.0
1,536,698	-				-2.3
1,536,698	-				-3.6
1,536,698	-				-3.3
1,536,698	-				-3.1
1,536,698	-				-0.7
1,536,698	-				-3.0
1,536,698	-				-2.5
1,536,698	-				-3.2
1,536,698	-				-0.7
1,536,698	-				-1.7
1,536,698	-				-3.1
1,536,698	-				+0.9
1,536,698	-				-2.1
1,536,698	-				-1.7
1,536,698	-				-4.3
1,536,698	-				-3.7
1,536,698	-				-1.1
1,536,719	+				-2.5
1,536,719	+				-0.1
1,536,719	+				-3.2
1,536,720	-				-2.1
1,536,720	-				-2.5
1,536,766	+				-1.1
1,536,766	+				+0.9
1,536,766	+				-2.0
1,536,766	+				-2.8
1,536,767	-				-1.1
1,536,767	-				+0.3
1,536,767	-				+0.9
1,536,767	-				+0.9
1,536,767	-				-1.5
1,536,929	+				+0.3
1,536,929	+				+0.9
1,536,929	+				-1.4
1,537,229	+		LRK53_RS06800	0.27	-1.7
1,537,667	+		LRK53_RS06800	0.59	-1.7
1,537,667	+		LRK53_RS06800	0.59	-0.7
1,537,667	+		LRK53_RS06800	0.59	-0.9
1,537,667	+		LRK53_RS06800	0.59	-2.8
1,537,668	-		LRK53_RS06800	0.59	-2.1
1,537,668	-		LRK53_RS06800	0.59	-1.1
1,537,668	-		LRK53_RS06800	0.59	-1.3
1,537,670	+		LRK53_RS06800	0.59	-0.7
1,537,670	+		LRK53_RS06800	0.59	+0.9
1,537,670	+		LRK53_RS06800	0.59	-0.7
1,537,670	+		LRK53_RS06800	0.59	-0.1
1,537,670	+		LRK53_RS06800	0.59	-0.7
1,537,671	-		LRK53_RS06800	0.59	-2.6
1,537,671	-		LRK53_RS06800	0.59	+0.9
1,537,671	-		LRK53_RS06800	0.59	+0.9
1,537,671	-		LRK53_RS06800	0.59	-1.1
1,537,671	-		LRK53_RS06800	0.59	+0.9
1,537,671	-		LRK53_RS06800	0.59	-0.8
1,537,671	-		LRK53_RS06800	0.59	+0.9
1,537,671	-		LRK53_RS06800	0.59	+0.3
1,537,803	+		LRK53_RS06800	0.69	+0.3
1,537,804	-		LRK53_RS06800	0.69	-0.7
1,537,853	+		LRK53_RS06800	0.72	-1.1
1,537,853	+		LRK53_RS06800	0.72	-2.1
1,537,853	+		LRK53_RS06800	0.72	-2.5
1,537,854	-		LRK53_RS06800	0.72	-2.5
1,537,854	-		LRK53_RS06800	0.72	-3.1
1,538,129	+				-1.8
1,538,129	+				-2.5
1,538,130	-				-3.1
1,538,130	-				+0.3
1,538,130	-				-0.6
1,538,263	+				+0.9
1,538,263	+				-0.5
1,538,264	-				-0.9
1,538,264	-				-0.6
1,538,264	-				+0.9
1,538,389	+				+1.4
1,538,390	-				-1.5
1,538,390	-				+0.9
1,538,390	-				-1.4
1,538,390	-				-0.1
1,538,390	-				-0.5
1,538,392	+				-0.5
1,538,392	+				-1.7
1,538,392	+				-0.8
1,538,392	+				-0.9
1,538,392	+				-1.0
1,538,392	+				-2.1
1,538,392	+				-0.7
1,538,392	+				-0.6
1,538,392	+				-3.7
1,538,393	-				+0.1
1,538,393	-				-1.5
1,538,393	-				-1.1
1,538,393	-				-1.1
1,538,393	-				+0.3
1,538,393	-				-0.7
1,538,393	-				+0.3
1,538,393	-				-1.9
1,538,393	-				-1.1
1,538,393	-				-0.7
1,538,393	-				-0.0
1,538,393	-				-0.1
1,538,393	-				-1.0
1,538,497	+		LRK53_RS06805	0.20	-0.7
1,538,497	+		LRK53_RS06805	0.20	+0.9
1,538,497	+		LRK53_RS06805	0.20	-1.5
1,538,498	-		LRK53_RS06805	0.20	+1.3
1,538,671	+		LRK53_RS06805	0.38	-0.5
1,538,671	+		LRK53_RS06805	0.38	-1.0
1,538,671	+		LRK53_RS06805	0.38	+0.9
1,538,671	+		LRK53_RS06805	0.38	+0.3
1,538,671	+		LRK53_RS06805	0.38	-1.3
1,538,671	+		LRK53_RS06805	0.38	-0.1
1,538,671	+		LRK53_RS06805	0.38	+0.0
1,538,671	+		LRK53_RS06805	0.38	-0.6
1,538,672	-		LRK53_RS06805	0.39	+0.3
1,538,672	-		LRK53_RS06805	0.39	+0.0
1,538,672	-		LRK53_RS06805	0.39	-0.7
1,538,672	-		LRK53_RS06805	0.39	-2.6
1,538,755	+		LRK53_RS06805	0.47	-0.4
1,538,755	+		LRK53_RS06805	0.47	-0.5
1,538,755	+		LRK53_RS06805	0.47	+0.9
1,538,755	+		LRK53_RS06805	0.47	-0.5
1,538,756	-		LRK53_RS06805	0.47	-2.6
1,538,800	+		LRK53_RS06805	0.52	-0.1
1,538,800	+		LRK53_RS06805	0.52	-1.4
1,538,800	+		LRK53_RS06805	0.52	+0.9
1,538,800	+		LRK53_RS06805	0.52	-1.1
1,538,800	+		LRK53_RS06805	0.52	+0.9
1,538,800	+		LRK53_RS06805	0.52	+0.0
1,538,800	+		LRK53_RS06805	0.52	-0.3
1,538,800	+		LRK53_RS06805	0.52	-0.6
1,538,800	+		LRK53_RS06805	0.52	-0.1
1,538,800	+		LRK53_RS06805	0.52	-0.8
1,538,800	+		LRK53_RS06805	0.52	-0.7
1,538,801	-		LRK53_RS06805	0.52	-1.8
1,538,801	-		LRK53_RS06805	0.52	-0.5
1,538,801	-		LRK53_RS06805	0.52	-0.1
1,538,801	-		LRK53_RS06805	0.52	-1.5
1,538,848	+		LRK53_RS06805	0.57	-1.1
1,538,848	+		LRK53_RS06805	0.57	-1.6
1,538,849	-		LRK53_RS06805	0.57	-0.1
1,538,849	-		LRK53_RS06805	0.57	-2.0
1,538,849	-		LRK53_RS06805	0.57	-0.6
1,538,912	+		LRK53_RS06805	0.64	-0.7
1,538,912	+		LRK53_RS06805	0.64	-0.7
1,538,912	+		LRK53_RS06805	0.64	-0.2
1,538,913	-		LRK53_RS06805	0.64	-0.7
1,539,013	+		LRK53_RS06805	0.74	-1.5
1,539,013	+		LRK53_RS06805	0.74	-0.7
1,539,013	+		LRK53_RS06805	0.74	-1.2
1,539,013	+		LRK53_RS06805	0.74	-2.6
1,539,013	+		LRK53_RS06805	0.74	+0.3
1,539,013	+		LRK53_RS06805	0.74	+0.9
1,539,013	+		LRK53_RS06805	0.74	+0.2
1,539,013	+		LRK53_RS06805	0.74	+0.9
1,539,013	+		LRK53_RS06805	0.74	+0.9
1,539,013	+		LRK53_RS06805	0.74	-0.5
1,539,013	+		LRK53_RS06805	0.74	-0.1
1,539,014	-		LRK53_RS06805	0.74	-0.3
1,539,014	-		LRK53_RS06805	0.74	-1.1
1,539,014	-		LRK53_RS06805	0.74	-2.0
1,539,014	-		LRK53_RS06805	0.74	+0.1
1,539,014	-		LRK53_RS06805	0.74	-0.7
1,539,014	-		LRK53_RS06805	0.74	+0.6
1,539,014	-		LRK53_RS06805	0.74	-0.7
1,539,014	-		LRK53_RS06805	0.74	+0.9
1,539,014	-		LRK53_RS06805	0.74	+0.4
1,539,014	-		LRK53_RS06805	0.74	+0.3
1,539,014	-		LRK53_RS06805	0.74	-0.8