Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04905

Experiment: defined media with D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with D-Glucose
1,139,480	+		LRK53_RS04900	0.55	+1.9
1,139,480	+		LRK53_RS04900	0.55	-0.1
1,139,480	+		LRK53_RS04900	0.55	-2.8
1,139,480	+		LRK53_RS04900	0.55	-1.7
1,139,480	+		LRK53_RS04900	0.55	-0.2
1,139,481	-		LRK53_RS04900	0.55	-0.3
1,139,481	-		LRK53_RS04900	0.55	-0.6
1,139,481	-		LRK53_RS04900	0.55	+0.2
1,139,520	-		LRK53_RS04900	0.57	-0.9
1,139,588	+		LRK53_RS04900	0.60	-2.3
1,139,588	+		LRK53_RS04900	0.60	-0.1
1,139,588	+		LRK53_RS04900	0.60	-1.3
1,139,589	-		LRK53_RS04900	0.60	+0.3
1,139,589	-		LRK53_RS04900	0.60	-1.1
1,139,589	-		LRK53_RS04900	0.60	+0.2
1,139,589	-		LRK53_RS04900	0.60	-0.5
1,139,589	-		LRK53_RS04900	0.60	-0.7
1,139,589	-		LRK53_RS04900	0.60	-1.1
1,139,765	+		LRK53_RS04900	0.68	-1.1
1,139,766	-		LRK53_RS04900	0.69	+2.6
1,139,870	+		LRK53_RS04900	0.73	-1.6
1,139,870	+		LRK53_RS04900	0.73	-0.7
1,139,871	-		LRK53_RS04900	0.73	+0.6
1,139,871	-		LRK53_RS04900	0.73	+0.5
1,139,871	-		LRK53_RS04900	0.73	-0.2
1,139,871	-		LRK53_RS04900	0.73	-0.7
1,139,871	-		LRK53_RS04900	0.73	-2.1
1,139,934	-		LRK53_RS04900	0.76	-0.7
1,140,050	+		LRK53_RS04900	0.82	-1.4
1,140,051	-		LRK53_RS04900	0.82	-1.6
1,140,194	+		LRK53_RS04900	0.89	-0.3
1,140,194	+		LRK53_RS04900	0.89	-0.1
1,140,194	+		LRK53_RS04900	0.89	-1.3
1,140,195	-		LRK53_RS04900	0.89	-1.3
1,140,195	-		LRK53_RS04900	0.89	+0.3
1,140,195	-		LRK53_RS04900	0.89	-0.4
1,140,195	-		LRK53_RS04900	0.89	-1.8
1,140,195	-		LRK53_RS04900	0.89	-1.3
1,140,195	-		LRK53_RS04900	0.89	-0.1
1,140,195	-		LRK53_RS04900	0.89	+0.9
1,140,195	-		LRK53_RS04900	0.89	-1.1
1,140,195	-		LRK53_RS04900	0.89	-0.1
1,140,195	-		LRK53_RS04900	0.89	-0.1
1,140,294	-				-0.7
1,140,296	+				-1.6
1,140,296	+				-1.7
1,140,296	+				-2.6
1,140,296	+				+0.3
1,140,296	+				-0.7
1,140,296	+				-2.1
1,140,296	+				-1.4
1,140,297	-				-0.2
1,140,297	-				+0.1
1,140,297	-				-0.1
1,140,297	-				-0.5
1,140,297	-				+0.9
1,140,443	+				-1.7
1,140,444	-				+0.9
1,140,444	-				+0.9
1,140,465	+				-1.1
1,140,466	-				+0.5
1,140,470	+				+0.8
1,140,470	+				+0.5
1,140,470	+				+2.5
1,140,471	-				-0.7
1,140,520	+				-1.2
1,140,520	+				-0.4
1,140,520	+				-0.1
1,140,520	+				-0.1
1,140,520	+				+0.1
1,140,520	+				+0.3
1,140,520	+				-0.8
1,140,520	+				-0.0
1,140,520	+				-1.6
1,140,520	+				+0.9
1,140,520	+				-0.6
1,140,520	+				+0.9
1,140,520	+				+1.9
1,140,520	+				-0.1
1,140,520	+				-1.3
1,140,520	+				+0.2
1,140,520	+				-1.3
1,140,520	+				-1.7
1,140,520	+				-0.1
1,140,521	-				+0.6
1,140,521	-				+1.1
1,140,521	-				+2.4
1,140,521	-				+1.2
1,140,521	-				+2.5
1,140,521	-				+1.2
1,140,521	-				+0.9
1,140,597	+		LRK53_RS04905	0.13	-0.4
1,140,597	+		LRK53_RS04905	0.13	-0.6
1,140,597	+		LRK53_RS04905	0.13	+0.7
1,140,598	-		LRK53_RS04905	0.13	-0.8
1,140,598	-		LRK53_RS04905	0.13	+1.2
1,140,598	-		LRK53_RS04905	0.13	+0.8
1,140,598	-		LRK53_RS04905	0.13	+1.9
1,140,639	+		LRK53_RS04905	0.17	-0.4
1,140,639	+		LRK53_RS04905	0.17	-0.1
1,140,639	+		LRK53_RS04905	0.17	-1.9
1,140,639	+		LRK53_RS04905	0.17	+0.9
1,140,640	-		LRK53_RS04905	0.17	+0.2
1,140,640	-		LRK53_RS04905	0.17	+1.1
1,140,640	-		LRK53_RS04905	0.17	+0.9
1,140,640	-		LRK53_RS04905	0.17	+0.9
1,140,825	+		LRK53_RS04905	0.34	-0.1
1,140,825	+		LRK53_RS04905	0.34	-1.0
1,140,825	+		LRK53_RS04905	0.34	-0.3
1,140,825	+		LRK53_RS04905	0.34	+0.3
1,140,825	+		LRK53_RS04905	0.34	-0.1
1,140,826	-		LRK53_RS04905	0.34	+2.5
1,140,826	-		LRK53_RS04905	0.34	+0.4
1,140,826	-		LRK53_RS04905	0.34	+0.3
1,140,826	-		LRK53_RS04905	0.34	+0.6
1,140,826	-		LRK53_RS04905	0.34	+0.4
1,140,826	-		LRK53_RS04905	0.34	-0.1
1,140,843	+		LRK53_RS04905	0.36	-1.1
1,140,980	+		LRK53_RS04905	0.49	-0.9
1,140,980	+		LRK53_RS04905	0.49	-2.9
1,140,980	+		LRK53_RS04905	0.49	-0.3
1,140,981	-		LRK53_RS04905	0.49	-0.7
1,140,981	-		LRK53_RS04905	0.49	+0.5
1,140,981	-		LRK53_RS04905	0.49	+0.9
1,140,981	-		LRK53_RS04905	0.49	+0.1
1,140,981	-		LRK53_RS04905	0.49	+0.1
1,140,981	-		LRK53_RS04905	0.49	-1.4
1,141,251	+		LRK53_RS04905	0.74	+0.5
1,141,251	+		LRK53_RS04905	0.74	-3.0
1,141,251	+		LRK53_RS04905	0.74	-1.7
1,141,251	+		LRK53_RS04905	0.74	-0.7
1,141,251	+		LRK53_RS04905	0.74	+0.9
1,141,251	+		LRK53_RS04905	0.74	+0.5
1,141,252	-		LRK53_RS04905	0.74	-0.1
1,141,252	-		LRK53_RS04905	0.74	-0.1
1,141,252	-		LRK53_RS04905	0.74	-0.5
1,141,252	-		LRK53_RS04905	0.74	-0.9
1,141,252	-		LRK53_RS04905	0.74	-0.1
1,141,308	+		LRK53_RS04905	0.79	-0.4
1,141,308	+		LRK53_RS04905	0.79	+0.0
1,141,308	+		LRK53_RS04905	0.79	+0.3
1,141,308	+		LRK53_RS04905	0.79	-0.3
1,141,309	-		LRK53_RS04905	0.79	+1.1
1,141,309	-		LRK53_RS04905	0.79	-0.9
1,141,309	-		LRK53_RS04905	0.79	+0.3
1,141,456	+				-0.1
1,141,456	+				-0.1
1,141,457	-				+0.1
1,141,512	+				-1.1
1,141,513	-				-0.5
1,141,545	+				-1.2
1,141,545	+				+0.9
1,141,636	+				+0.9
1,141,681	+		LRK53_RS04910	0.11	+1.5
1,141,681	+		LRK53_RS04910	0.11	-1.1
1,141,681	+		LRK53_RS04910	0.11	+0.9
1,141,681	+		LRK53_RS04910	0.11	+1.5
1,141,681	+		LRK53_RS04910	0.11	-1.8
1,141,681	+		LRK53_RS04910	0.11	-1.0
1,141,681	+		LRK53_RS04910	0.11	-0.2
1,141,681	+		LRK53_RS04910	0.11	+1.5
1,141,681	+		LRK53_RS04910	0.11	-1.1
1,141,681	+		LRK53_RS04910	0.11	+0.2
1,141,681	+		LRK53_RS04910	0.11	-0.4
1,141,681	+		LRK53_RS04910	0.11	-0.1
1,141,682	-		LRK53_RS04910	0.12	-0.9
1,141,682	-		LRK53_RS04910	0.12	-1.8
1,141,682	-		LRK53_RS04910	0.12	+0.9
1,141,682	-		LRK53_RS04910	0.12	+0.5
1,141,682	-		LRK53_RS04910	0.12	-1.1
1,141,682	-		LRK53_RS04910	0.12	-0.3
1,141,682	-		LRK53_RS04910	0.12	+0.2
1,141,682	-		LRK53_RS04910	0.12	+0.5
1,141,702	+		LRK53_RS04910	0.13	+1.9
1,141,804	+		LRK53_RS04910	0.21	-1.6
1,141,805	-		LRK53_RS04910	0.21	-0.5
1,141,805	-		LRK53_RS04910	0.21	-0.1
1,141,829	-		LRK53_RS04910	0.23	+0.7
1,141,874	+		LRK53_RS04910	0.26	-0.7
1,141,874	+		LRK53_RS04910	0.26	-1.7
1,141,875	-		LRK53_RS04910	0.26	+0.2
1,141,935	+		LRK53_RS04910	0.31	-0.1
1,141,935	+		LRK53_RS04910	0.31	-1.2
1,141,935	+		LRK53_RS04910	0.31	-1.7
1,141,936	-		LRK53_RS04910	0.31	-0.9
1,141,956	-		LRK53_RS04910	0.32	-1.1
1,141,972	+		LRK53_RS04910	0.33	-0.1
1,141,972	+		LRK53_RS04910	0.33	-0.9
1,141,972	+		LRK53_RS04910	0.33	-0.4
1,141,972	+		LRK53_RS04910	0.33	-0.1
1,141,972	+		LRK53_RS04910	0.33	+1.3
1,141,972	+		LRK53_RS04910	0.33	-0.7
1,141,972	+		LRK53_RS04910	0.33	-0.3
1,141,972	+		LRK53_RS04910	0.33	-1.1
1,141,972	+		LRK53_RS04910	0.33	-1.7
1,141,972	+		LRK53_RS04910	0.33	+0.9
1,141,973	-		LRK53_RS04910	0.33	-0.7
1,141,973	-		LRK53_RS04910	0.33	+0.3
1,141,973	-		LRK53_RS04910	0.33	+0.1
1,141,973	-		LRK53_RS04910	0.33	-0.3
1,141,973	-		LRK53_RS04910	0.33	-0.7
1,142,011	+		LRK53_RS04910	0.36	-1.3
1,142,011	+		LRK53_RS04910	0.36	-0.4
1,142,011	+		LRK53_RS04910	0.36	-0.3
1,142,012	-		LRK53_RS04910	0.36	+0.9
1,142,012	-		LRK53_RS04910	0.36	-1.8
1,142,064	-		LRK53_RS04910	0.40	-1.1
1,142,064	-		LRK53_RS04910	0.40	+0.9
1,142,135	+		LRK53_RS04910	0.46	-0.1
1,142,136	-		LRK53_RS04910	0.46	-1.7
1,142,136	-		LRK53_RS04910	0.46	-0.7
1,142,240	-		LRK53_RS04910	0.53	+0.3
1,142,240	-		LRK53_RS04910	0.53	-0.3
1,142,254	+		LRK53_RS04910	0.55	-0.7
1,142,255	-		LRK53_RS04910	0.55	+0.9
1,142,464	+		LRK53_RS04910	0.70	+0.6
1,142,464	+		LRK53_RS04910	0.70	-0.7
1,142,464	+		LRK53_RS04910	0.70	-0.4
1,142,464	+		LRK53_RS04910	0.70	-1.4
1,142,464	+		LRK53_RS04910	0.70	-0.7
1,142,464	+		LRK53_RS04910	0.70	+1.5
1,142,465	-		LRK53_RS04910	0.70	-0.4
1,142,465	-		LRK53_RS04910	0.70	-0.1
1,142,465	-		LRK53_RS04910	0.70	+1.5
1,142,465	-		LRK53_RS04910	0.70	-1.7
1,142,465	-		LRK53_RS04910	0.70	-0.7
1,142,465	-		LRK53_RS04910	0.70	+0.3
1,142,472	+		LRK53_RS04910	0.71	-0.8
1,142,472	+		LRK53_RS04910	0.71	+0.9
1,142,472	+		LRK53_RS04910	0.71	+0.5
1,142,472	+		LRK53_RS04910	0.71	+0.3
1,142,472	+		LRK53_RS04910	0.71	-0.1
1,142,472	+		LRK53_RS04910	0.71	-0.1
1,142,473	-		LRK53_RS04910	0.71	-0.1
1,142,473	-		LRK53_RS04910	0.71	+2.2
1,142,473	-		LRK53_RS04910	0.71	-1.3
1,142,473	-		LRK53_RS04910	0.71	-0.3
1,142,473	-		LRK53_RS04910	0.71	-1.9
1,142,473	-		LRK53_RS04910	0.71	+0.2