Strain Fitness in Escherichia coli ECRC98 around JDDGAC_21990

Experiment: WM_Bas61

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas61
4,202,944	+	garD	JDDGAC_21985	0.60	+1.5
4,202,944	+	garD	JDDGAC_21985	0.60	-0.5
4,202,945	-	garD	JDDGAC_21985	0.60	+0.5
4,202,962	-	garD	JDDGAC_21985	0.61	-2.2
4,202,998	+	garD	JDDGAC_21985	0.64	-1.8
4,202,998	+	garD	JDDGAC_21985	0.64	+0.7
4,202,998	+	garD	JDDGAC_21985	0.64	+0.1
4,202,998	+	garD	JDDGAC_21985	0.64	+0.4
4,202,999	-	garD	JDDGAC_21985	0.64	-0.5
4,202,999	-	garD	JDDGAC_21985	0.64	+0.5
4,202,999	-	garD	JDDGAC_21985	0.64	+0.6
4,203,112	+	garD	JDDGAC_21985	0.71	-0.7
4,203,112	+	garD	JDDGAC_21985	0.71	+0.6
4,203,113	-	garD	JDDGAC_21985	0.71	-0.8
4,203,113	-	garD	JDDGAC_21985	0.71	-0.1
4,203,116	+	garD	JDDGAC_21985	0.71	+0.1
4,203,117	-	garD	JDDGAC_21985	0.71	-0.5
4,203,292	+	garD	JDDGAC_21985	0.82	+0.0
4,203,293	-	garD	JDDGAC_21985	0.83	+0.3
4,203,369	+	garD	JDDGAC_21985	0.87	-0.8
4,203,433	+				-1.2
4,203,889	+				+0.9
4,203,994	+				+0.9
4,204,064	+				-0.4
4,204,090	+	garP	JDDGAC_21990	0.11	+0.5
4,204,203	+	garP	JDDGAC_21990	0.20	-0.5
4,204,204	-	garP	JDDGAC_21990	0.20	-0.0
4,204,253	+	garP	JDDGAC_21990	0.23	+0.0
4,204,254	-	garP	JDDGAC_21990	0.23	-0.6
4,204,346	+	garP	JDDGAC_21990	0.30	-1.1
4,204,413	+	garP	JDDGAC_21990	0.35	-1.7
4,204,562	+	garP	JDDGAC_21990	0.46	+0.2
4,204,562	+	garP	JDDGAC_21990	0.46	+0.3
4,204,562	+	garP	JDDGAC_21990	0.46	-0.7
4,204,562	+	garP	JDDGAC_21990	0.46	-0.5
4,204,563	-	garP	JDDGAC_21990	0.47	-1.4
4,204,563	-	garP	JDDGAC_21990	0.47	-1.8
4,204,563	-	garP	JDDGAC_21990	0.47	-1.6
4,204,563	-	garP	JDDGAC_21990	0.47	-0.8
4,204,587	-	garP	JDDGAC_21990	0.48	-2.3
4,204,665	+	garP	JDDGAC_21990	0.54	-0.1
4,204,666	-	garP	JDDGAC_21990	0.54	-0.2
4,204,787	+	garP	JDDGAC_21990	0.63	-0.7
4,204,913	+	garP	JDDGAC_21990	0.73	-0.3
4,204,914	-	garP	JDDGAC_21990	0.73	-2.1
4,204,914	-	garP	JDDGAC_21990	0.73	-0.4
4,204,960	+	garP	JDDGAC_21990	0.76	-0.0
4,204,964	+	garP	JDDGAC_21990	0.77	-1.5
4,204,965	-	garP	JDDGAC_21990	0.77	-0.1
4,204,968	+	garP	JDDGAC_21990	0.77	+1.5
4,204,968	+	garP	JDDGAC_21990	0.77	-0.4
4,204,968	+	garP	JDDGAC_21990	0.77	+0.7
4,204,969	-	garP	JDDGAC_21990	0.77	-1.0
4,204,969	-	garP	JDDGAC_21990	0.77	-0.2
4,205,158	+				-1.8
4,205,253	-				-0.0
4,205,253	-				-0.0
4,205,259	-				-0.1
4,205,274	+				-0.2
4,205,284	+				+0.7
4,205,284	+				-0.4
4,205,285	-				-0.2
4,205,385	-	garL	JDDGAC_21995	0.12	+2.2
4,205,454	-	garL	JDDGAC_21995	0.21	+0.5
4,205,510	-	garL	JDDGAC_21995	0.28	-1.2
4,205,537	-	garL	JDDGAC_21995	0.32	+0.8
4,205,540	+	garL	JDDGAC_21995	0.32	-0.1
4,205,544	-	garL	JDDGAC_21995	0.33	-1.4
4,205,682	-	garL	JDDGAC_21995	0.51	+2.0
4,205,747	-	garL	JDDGAC_21995	0.59	+0.2
4,205,769	-	garL	JDDGAC_21995	0.62	-1.4
4,205,781	-	garL	JDDGAC_21995	0.63	+0.3
4,205,781	-	garL	JDDGAC_21995	0.63	-0.4
4,205,781	-	garL	JDDGAC_21995	0.63	+0.8
4,205,843	-	garL	JDDGAC_21995	0.71	+0.4
4,205,876	-	garL	JDDGAC_21995	0.76	+0.1
4,205,876	-	garL	JDDGAC_21995	0.76	-1.3
4,206,091	+				-1.7
4,206,091	+				+0.1
4,206,091	+				+0.0
4,206,092	-				+0.1
4,206,112	+				-1.6
4,206,145	+				+0.4
4,206,203	-	garR	JDDGAC_22000	0.12	-0.9
4,206,203	-	garR	JDDGAC_22000	0.12	-0.0