Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12350

Experiment: defined media with L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with L-Serine
2,737,845	+		LRK53_RS12345	0.18	-0.6
2,737,845	+		LRK53_RS12345	0.18	-1.3
2,737,845	+		LRK53_RS12345	0.18	-1.5
2,737,845	+		LRK53_RS12345	0.18	-1.1
2,737,845	+		LRK53_RS12345	0.18	-0.1
2,737,845	+		LRK53_RS12345	0.18	-0.5
2,737,845	+		LRK53_RS12345	0.18	-2.1
2,737,845	+		LRK53_RS12345	0.18	-0.7
2,737,845	+		LRK53_RS12345	0.18	-0.7
2,737,845	+		LRK53_RS12345	0.18	+0.9
2,737,846	-		LRK53_RS12345	0.18	-0.1
2,737,846	-		LRK53_RS12345	0.18	-0.1
2,737,846	-		LRK53_RS12345	0.18	-0.1
2,737,846	-		LRK53_RS12345	0.18	+1.4
2,737,846	-		LRK53_RS12345	0.18	-0.1
2,737,846	-		LRK53_RS12345	0.18	+0.9
2,737,846	-		LRK53_RS12345	0.18	-0.1
2,737,846	-		LRK53_RS12345	0.18	-1.5
2,737,846	-		LRK53_RS12345	0.18	-1.2
2,737,846	-		LRK53_RS12345	0.18	-1.9
2,737,846	-		LRK53_RS12345	0.18	+0.3
2,737,846	-		LRK53_RS12345	0.18	+1.4
2,737,846	-		LRK53_RS12345	0.18	+0.3
2,737,846	-		LRK53_RS12345	0.18	-0.3
2,737,846	-		LRK53_RS12345	0.18	-0.1
2,737,846	-		LRK53_RS12345	0.18	-0.1
2,737,846	-		LRK53_RS12345	0.18	-0.7
2,737,846	-		LRK53_RS12345	0.18	+0.9
2,737,846	-		LRK53_RS12345	0.18	-1.9
2,737,846	-		LRK53_RS12345	0.18	+1.9
2,737,846	-		LRK53_RS12345	0.18	-1.0
2,737,858	+		LRK53_RS12345	0.19	-0.1
2,737,858	+		LRK53_RS12345	0.19	-0.7
2,737,859	-		LRK53_RS12345	0.19	-1.3
2,737,859	-		LRK53_RS12345	0.19	-0.7
2,737,883	+		LRK53_RS12345	0.22	-0.1
2,737,883	+		LRK53_RS12345	0.22	-0.3
2,737,883	+		LRK53_RS12345	0.22	+0.9
2,737,883	+		LRK53_RS12345	0.22	-0.6
2,737,883	+		LRK53_RS12345	0.22	-2.5
2,737,883	+		LRK53_RS12345	0.22	-1.7
2,737,883	+		LRK53_RS12345	0.22	-1.7
2,737,883	+		LRK53_RS12345	0.22	-1.0
2,737,883	+		LRK53_RS12345	0.22	-0.5
2,737,883	+		LRK53_RS12345	0.22	-0.0
2,737,883	+		LRK53_RS12345	0.22	-0.9
2,737,883	+		LRK53_RS12345	0.22	-1.6
2,737,883	+		LRK53_RS12345	0.22	-1.4
2,737,883	+		LRK53_RS12345	0.22	-1.9
2,737,884	-		LRK53_RS12345	0.22	+0.9
2,737,884	-		LRK53_RS12345	0.22	-0.1
2,737,884	-		LRK53_RS12345	0.22	-2.1
2,737,884	-		LRK53_RS12345	0.22	+0.9
2,737,884	-		LRK53_RS12345	0.22	-1.9
2,737,885	+		LRK53_RS12345	0.22	-0.8
2,737,885	+		LRK53_RS12345	0.22	-0.3
2,737,886	-		LRK53_RS12345	0.22	+0.1
2,737,886	-		LRK53_RS12345	0.22	-0.8
2,737,886	-		LRK53_RS12345	0.22	+0.9
2,737,886	-		LRK53_RS12345	0.22	+0.1
2,738,070	+		LRK53_RS12345	0.41	+0.3
2,738,070	+		LRK53_RS12345	0.41	-0.9
2,738,070	+		LRK53_RS12345	0.41	+0.3
2,738,070	+		LRK53_RS12345	0.41	-1.9
2,738,070	+		LRK53_RS12345	0.41	-1.0
2,738,070	+		LRK53_RS12345	0.41	+0.9
2,738,071	-		LRK53_RS12345	0.41	-1.7
2,738,071	-		LRK53_RS12345	0.41	-1.6
2,738,071	-		LRK53_RS12345	0.41	+0.4
2,738,071	-		LRK53_RS12345	0.41	-0.4
2,738,071	-		LRK53_RS12345	0.41	-0.5
2,738,071	-		LRK53_RS12345	0.41	-2.6
2,738,071	-		LRK53_RS12345	0.41	-0.9
2,738,071	-		LRK53_RS12345	0.41	-1.1
2,738,071	-		LRK53_RS12345	0.41	+0.9
2,738,071	-		LRK53_RS12345	0.41	+0.1
2,738,071	-		LRK53_RS12345	0.41	-1.1
2,738,194	-		LRK53_RS12345	0.54	-0.9
2,738,250	+		LRK53_RS12345	0.59	+0.9
2,738,250	+		LRK53_RS12345	0.59	+0.3
2,738,251	-		LRK53_RS12345	0.59	+0.9
2,738,251	-		LRK53_RS12345	0.59	-0.1
2,738,251	-		LRK53_RS12345	0.59	-0.1
2,738,251	-		LRK53_RS12345	0.59	-0.1
2,738,251	-		LRK53_RS12345	0.59	+0.5
2,738,251	-		LRK53_RS12345	0.59	-1.7
2,738,560	+				-1.1
2,738,560	+				-0.4
2,738,851	-				+0.9
2,738,856	+				-1.9
2,738,856	+				+1.3
2,738,856	+				+0.0
2,738,856	+				+2.1
2,738,856	+				-0.9
2,738,856	+				-1.0
2,738,856	+				-0.1
2,738,856	+				+1.3
2,738,857	-				-0.7
2,738,857	-				+0.9
2,738,857	-				-1.1
2,738,857	-				-0.1
2,738,857	-				-1.9
2,738,857	-				-2.6
2,738,857	-				-0.6
2,738,857	-				-0.4
2,738,857	-				-0.1
2,738,857	-				-0.9
2,738,857	-				+0.1
2,738,857	-				-1.6
2,738,857	-				+0.3
2,738,857	-				-1.5
2,738,857	-				-0.7
2,738,862	+				-1.7
2,738,863	-				-0.5
2,738,863	-				-1.5
2,738,863	-				+0.9
2,739,066	+		LRK53_RS12350	0.11	-0.6
2,739,066	+		LRK53_RS12350	0.11	-0.1
2,739,081	+		LRK53_RS12350	0.12	-0.1
2,739,081	+		LRK53_RS12350	0.12	-0.9
2,739,081	+		LRK53_RS12350	0.12	+1.9
2,739,082	-		LRK53_RS12350	0.12	-0.7
2,739,082	-		LRK53_RS12350	0.12	-1.3
2,739,082	-		LRK53_RS12350	0.12	-1.5
2,739,600	+		LRK53_RS12350	0.31	-0.6
2,739,600	+		LRK53_RS12350	0.31	+0.3
2,739,601	-		LRK53_RS12350	0.31	-1.4
2,739,601	-		LRK53_RS12350	0.31	+0.7
2,739,601	-		LRK53_RS12350	0.31	-1.1
2,739,601	-		LRK53_RS12350	0.31	-0.7
2,739,601	-		LRK53_RS12350	0.31	-0.6
2,739,639	+		LRK53_RS12350	0.32	-1.1
2,739,639	+		LRK53_RS12350	0.32	-0.1
2,739,639	+		LRK53_RS12350	0.32	-0.7
2,739,639	+		LRK53_RS12350	0.32	+0.6
2,739,639	+		LRK53_RS12350	0.32	-0.7
2,739,640	-		LRK53_RS12350	0.32	-0.1
2,739,640	-		LRK53_RS12350	0.32	-0.2
2,739,640	-		LRK53_RS12350	0.32	-1.3
2,739,640	-		LRK53_RS12350	0.32	+2.4
2,739,640	-		LRK53_RS12350	0.32	-0.8
2,739,640	-		LRK53_RS12350	0.32	-0.1
2,739,736	-		LRK53_RS12350	0.36	-0.7
2,739,936	+		LRK53_RS12350	0.43	-0.5
2,739,936	+		LRK53_RS12350	0.43	-0.6
2,739,936	+		LRK53_RS12350	0.43	-0.6
2,739,936	+		LRK53_RS12350	0.43	-1.5
2,739,936	+		LRK53_RS12350	0.43	+0.4
2,739,936	+		LRK53_RS12350	0.43	+0.9
2,739,936	+		LRK53_RS12350	0.43	-1.0
2,739,936	+		LRK53_RS12350	0.43	-0.1
2,739,936	+		LRK53_RS12350	0.43	+1.9
2,739,936	+		LRK53_RS12350	0.43	-0.5
2,739,936	+		LRK53_RS12350	0.43	-1.6
2,739,936	+		LRK53_RS12350	0.43	-1.3
2,739,936	+		LRK53_RS12350	0.43	-1.7
2,739,936	+		LRK53_RS12350	0.43	-1.3
2,739,937	-		LRK53_RS12350	0.43	-0.1
2,739,937	-		LRK53_RS12350	0.43	-0.9
2,739,937	-		LRK53_RS12350	0.43	-1.7
2,739,937	-		LRK53_RS12350	0.43	-0.7
2,739,937	-		LRK53_RS12350	0.43	-0.7
2,739,937	-		LRK53_RS12350	0.43	-1.6
2,739,937	-		LRK53_RS12350	0.43	+0.5
2,739,937	-		LRK53_RS12350	0.43	-0.4
2,739,937	-		LRK53_RS12350	0.43	-0.1
2,739,937	-		LRK53_RS12350	0.43	+1.9
2,739,937	-		LRK53_RS12350	0.43	+0.1
2,739,937	-		LRK53_RS12350	0.43	-0.1
2,739,937	-		LRK53_RS12350	0.43	-1.9
2,740,137	-		LRK53_RS12350	0.50	-2.9
2,740,146	+		LRK53_RS12350	0.51	-0.8
2,740,146	+		LRK53_RS12350	0.51	+0.9
2,740,146	+		LRK53_RS12350	0.51	-1.2
2,740,147	-		LRK53_RS12350	0.51	+0.4
2,740,147	-		LRK53_RS12350	0.51	-0.7
2,740,147	-		LRK53_RS12350	0.51	-1.9
2,740,147	-		LRK53_RS12350	0.51	-0.1
2,740,147	-		LRK53_RS12350	0.51	-0.9
2,740,149	+		LRK53_RS12350	0.51	-0.1
2,740,149	+		LRK53_RS12350	0.51	+0.3
2,740,149	+		LRK53_RS12350	0.51	+0.9
2,740,149	+		LRK53_RS12350	0.51	-0.1
2,740,150	-		LRK53_RS12350	0.51	-1.1
2,740,150	-		LRK53_RS12350	0.51	+1.9
2,740,150	-		LRK53_RS12350	0.51	-0.1
2,740,150	-		LRK53_RS12350	0.51	-0.1
2,740,203	+		LRK53_RS12350	0.53	+0.3
2,740,203	+		LRK53_RS12350	0.53	-0.7
2,740,204	-		LRK53_RS12350	0.53	-1.5
2,740,204	-		LRK53_RS12350	0.53	-2.9
2,740,204	-		LRK53_RS12350	0.53	-0.8
2,740,204	-		LRK53_RS12350	0.53	+0.3
2,740,232	+		LRK53_RS12350	0.54	-0.1
2,740,232	+		LRK53_RS12350	0.54	-0.1
2,740,232	+		LRK53_RS12350	0.54	-0.1
2,740,232	+		LRK53_RS12350	0.54	-1.1
2,740,232	+		LRK53_RS12350	0.54	-0.6
2,740,232	+		LRK53_RS12350	0.54	-0.1
2,740,232	+		LRK53_RS12350	0.54	-3.2
2,740,233	-		LRK53_RS12350	0.54	+0.3
2,740,233	-		LRK53_RS12350	0.54	-1.7
2,740,233	-		LRK53_RS12350	0.54	+0.3
2,740,233	-		LRK53_RS12350	0.54	-0.6
2,740,233	-		LRK53_RS12350	0.54	-0.5
2,740,233	-		LRK53_RS12350	0.54	+0.0
2,740,829	-		LRK53_RS12350	0.76	-2.2
2,740,838	+		LRK53_RS12350	0.76	+0.7
2,740,838	+		LRK53_RS12350	0.76	-0.5
2,740,839	-		LRK53_RS12350	0.76	-1.4
2,740,839	-		LRK53_RS12350	0.76	-2.0
2,740,839	-		LRK53_RS12350	0.76	-0.7
2,740,839	-		LRK53_RS12350	0.76	-1.1
2,740,839	-		LRK53_RS12350	0.76	-0.1
2,740,839	-		LRK53_RS12350	0.76	-1.3
2,740,839	-		LRK53_RS12350	0.76	-0.1
2,740,839	-		LRK53_RS12350	0.76	-1.0
2,740,868	+		LRK53_RS12350	0.77	-1.1
2,740,868	+		LRK53_RS12350	0.77	-0.6
2,740,868	+		LRK53_RS12350	0.77	-0.5
2,740,869	-		LRK53_RS12350	0.77	-0.7
2,740,869	-		LRK53_RS12350	0.77	-1.1
2,740,869	-		LRK53_RS12350	0.77	-0.9
2,740,869	-		LRK53_RS12350	0.77	-0.4
2,741,019	+		LRK53_RS12350	0.83	+0.3
2,741,019	+		LRK53_RS12350	0.83	-0.1
2,741,019	+		LRK53_RS12350	0.83	+0.9
2,741,019	+		LRK53_RS12350	0.83	-0.1
2,741,019	+		LRK53_RS12350	0.83	-0.7
2,741,019	+		LRK53_RS12350	0.83	+1.9
2,741,019	+		LRK53_RS12350	0.83	-1.8
2,741,019	+		LRK53_RS12350	0.83	+0.1
2,741,019	+		LRK53_RS12350	0.83	-0.1
2,741,019	+		LRK53_RS12350	0.83	-0.1
2,741,019	+		LRK53_RS12350	0.83	-1.5
2,741,019	+		LRK53_RS12350	0.83	-0.6
2,741,019	+		LRK53_RS12350	0.83	+0.3
2,741,019	+		LRK53_RS12350	0.83	-0.7
2,741,020	-		LRK53_RS12350	0.83	+0.3
2,741,020	-		LRK53_RS12350	0.83	+0.9
2,741,020	-		LRK53_RS12350	0.83	-0.1
2,741,020	-		LRK53_RS12350	0.83	+1.4
2,741,020	-		LRK53_RS12350	0.83	-0.1
2,741,020	-		LRK53_RS12350	0.83	-0.7
2,741,020	-		LRK53_RS12350	0.83	-0.1
2,741,020	-		LRK53_RS12350	0.83	-1.8
2,741,020	-		LRK53_RS12350	0.83	+0.2
2,741,020	-		LRK53_RS12350	0.83	+0.9
2,741,020	-		LRK53_RS12350	0.83	-0.1
2,741,020	-		LRK53_RS12350	0.83	+0.4
2,741,020	-		LRK53_RS12350	0.83	-0.1
2,741,020	-		LRK53_RS12350	0.83	+0.1
2,741,020	-		LRK53_RS12350	0.83	-0.8
2,741,020	-		LRK53_RS12350	0.83	+0.3
2,741,020	-		LRK53_RS12350	0.83	+0.1
2,741,020	-		LRK53_RS12350	0.83	-0.3
2,741,020	-		LRK53_RS12350	0.83	+1.9
2,741,106	+		LRK53_RS12350	0.86	-1.7
2,741,106	+		LRK53_RS12350	0.86	-0.4
2,741,106	+		LRK53_RS12350	0.86	-1.5
2,741,106	+		LRK53_RS12350	0.86	-0.9
2,741,107	-		LRK53_RS12350	0.86	+0.1
2,741,107	-		LRK53_RS12350	0.86	+0.4
2,741,107	-		LRK53_RS12350	0.86	-1.1
2,741,107	-		LRK53_RS12350	0.86	-0.9
2,741,107	-		LRK53_RS12350	0.86	-0.9
2,741,211	+		LRK53_RS12350	0.90	+0.1
2,741,212	-		LRK53_RS12350	0.90	-0.7
2,741,262	+				+2.4
2,741,262	+				-1.1
2,741,262	+				+0.4
2,741,262	+				+0.1
2,741,263	-				-0.7
2,741,263	-				-1.7
2,741,263	-				+0.9
2,741,263	-				-0.9
2,741,263	-				-0.4
2,741,310	+				-0.9
2,741,451	+				-0.1
2,741,451	+				+0.3
2,741,451	+				-1.3
2,741,451	+				-0.8
2,741,451	+				+1.1
2,741,452	-				+1.9
2,741,452	-				-0.1
2,741,522	+				-0.9
2,741,522	+				-1.1
2,741,522	+				-1.1
2,741,522	+				+1.4
2,741,522	+				-0.1
2,741,522	+				+0.9
2,741,522	+				+0.9
2,741,522	+				-0.1
2,741,523	-				-0.1
2,741,523	-				-0.1
2,741,523	-				-0.7
2,741,523	-				-0.1
2,741,523	-				-0.7
2,741,646	+				-0.7
2,741,646	+				-0.1
2,741,647	-				-0.1
2,741,647	-				-1.1
2,741,647	-				-0.1
2,741,652	+				+0.1
2,741,652	+				+0.4
2,741,652	+				+0.3
2,741,652	+				-2.1
2,741,652	+				-0.6
2,741,652	+				-2.3
2,741,652	+				+0.3
2,741,652	+				-0.1
2,741,652	+				-2.1
2,741,653	-		LRK53_RS12355	0.10	-0.4
2,741,653	-		LRK53_RS12355	0.10	-0.1
2,741,653	-		LRK53_RS12355	0.10	+0.3
2,741,653	-		LRK53_RS12355	0.10	-0.5
2,741,653	-		LRK53_RS12355	0.10	-0.3
2,741,653	-		LRK53_RS12355	0.10	-0.8
2,741,653	-		LRK53_RS12355	0.10	-0.7
2,741,653	-		LRK53_RS12355	0.10	+0.3
2,741,653	-		LRK53_RS12355	0.10	+0.4
2,741,653	-		LRK53_RS12355	0.10	-1.6
2,741,653	-		LRK53_RS12355	0.10	-1.9
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2,741,728	+		LRK53_RS12355	0.20	-1.7
2,741,728	+		LRK53_RS12355	0.20	-2.1
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2,741,729	-		LRK53_RS12355	0.20	-1.0
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2,741,762	+		LRK53_RS12355	0.24	+1.3
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2,741,828	+		LRK53_RS12355	0.33	+1.4
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2,742,032	+		LRK53_RS12355	0.59	+0.1
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2,742,346	-				-1.7