Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15510

Experiment: defined media with L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with L-Serine
3,395,165	+		LRK53_RS15505	0.66	-0.7
3,395,165	+		LRK53_RS15505	0.66	+0.7
3,395,165	+		LRK53_RS15505	0.66	-2.3
3,395,165	+		LRK53_RS15505	0.66	+0.1
3,395,165	+		LRK53_RS15505	0.66	+0.1
3,395,165	+		LRK53_RS15505	0.66	-0.7
3,395,166	-		LRK53_RS15505	0.66	-1.3
3,395,166	-		LRK53_RS15505	0.66	+1.7
3,395,166	-		LRK53_RS15505	0.66	+0.7
3,395,213	+		LRK53_RS15505	0.68	-1.2
3,395,213	+		LRK53_RS15505	0.68	+0.3
3,395,213	+		LRK53_RS15505	0.68	-0.1
3,395,213	+		LRK53_RS15505	0.68	-1.5
3,395,213	+		LRK53_RS15505	0.68	-1.5
3,395,213	+		LRK53_RS15505	0.68	-0.5
3,395,213	+		LRK53_RS15505	0.68	-1.4
3,395,214	-		LRK53_RS15505	0.68	-0.5
3,395,214	-		LRK53_RS15505	0.68	-0.5
3,395,214	-		LRK53_RS15505	0.68	-1.9
3,395,282	+		LRK53_RS15505	0.72	+0.1
3,395,378	+		LRK53_RS15505	0.77	-0.5
3,395,378	+		LRK53_RS15505	0.77	+0.1
3,395,378	+		LRK53_RS15505	0.77	+0.1
3,395,378	+		LRK53_RS15505	0.77	-0.3
3,395,378	+		LRK53_RS15505	0.77	-1.2
3,395,378	+		LRK53_RS15505	0.77	-1.4
3,395,379	-		LRK53_RS15505	0.77	-1.5
3,395,379	-		LRK53_RS15505	0.77	-0.2
3,395,379	-		LRK53_RS15505	0.77	+0.5
3,395,379	-		LRK53_RS15505	0.77	-0.7
3,395,405	+		LRK53_RS15505	0.78	-0.5
3,395,405	+		LRK53_RS15505	0.78	+0.1
3,395,405	+		LRK53_RS15505	0.78	-0.5
3,395,405	+		LRK53_RS15505	0.78	+0.1
3,395,405	+		LRK53_RS15505	0.78	-0.5
3,395,405	+		LRK53_RS15505	0.78	+0.5
3,395,405	+		LRK53_RS15505	0.78	-2.2
3,395,406	-		LRK53_RS15505	0.78	+0.1
3,395,406	-		LRK53_RS15505	0.78	+1.1
3,395,406	-		LRK53_RS15505	0.78	+0.5
3,395,406	-		LRK53_RS15505	0.78	-0.9
3,395,406	-		LRK53_RS15505	0.78	-0.1
3,395,426	+		LRK53_RS15505	0.79	-1.7
3,395,426	+		LRK53_RS15505	0.79	+0.5
3,395,426	+		LRK53_RS15505	0.79	+1.1
3,395,426	+		LRK53_RS15505	0.79	+0.1
3,395,426	+		LRK53_RS15505	0.79	+1.1
3,395,426	+		LRK53_RS15505	0.79	-0.5
3,395,426	+		LRK53_RS15505	0.79	+0.5
3,395,427	-		LRK53_RS15505	0.79	-0.5
3,395,427	-		LRK53_RS15505	0.79	+1.1
3,395,441	+		LRK53_RS15505	0.80	-0.5
3,395,442	-		LRK53_RS15505	0.80	-1.2
3,395,442	-		LRK53_RS15505	0.80	+0.1
3,395,558	+		LRK53_RS15505	0.86	+1.1
3,395,559	-		LRK53_RS15505	0.86	+0.1
3,395,559	-		LRK53_RS15505	0.86	-1.3
3,395,559	-		LRK53_RS15505	0.86	-1.2
3,395,559	-		LRK53_RS15505	0.86	-0.9
3,395,618	+		LRK53_RS15505	0.89	-1.5
3,395,618	+		LRK53_RS15505	0.89	-0.5
3,395,618	+		LRK53_RS15505	0.89	-0.3
3,395,618	+		LRK53_RS15505	0.89	-1.5
3,395,618	+		LRK53_RS15505	0.89	+0.1
3,395,619	-		LRK53_RS15505	0.89	-0.5
3,395,619	-		LRK53_RS15505	0.89	+0.7
3,395,619	-		LRK53_RS15505	0.89	+2.7
3,395,619	-		LRK53_RS15505	0.89	+0.5
3,395,619	-		LRK53_RS15505	0.89	+1.1
3,395,619	-		LRK53_RS15505	0.89	+0.1
3,395,686	+				-1.3
3,395,686	+				+1.1
3,395,687	-				-0.2
3,395,687	-				+0.1
3,395,687	-				-2.3
3,395,762	+				+1.5
3,395,762	+				-1.5
3,395,762	+				-1.8
3,395,763	-				+0.5
3,395,763	-				-1.2
3,395,763	-				-2.2
3,395,763	-				-2.2
3,395,763	-				-1.4
3,396,201	+		LRK53_RS15510	0.13	+0.1
3,396,246	+		LRK53_RS15510	0.16	-1.2
3,396,246	+		LRK53_RS15510	0.16	-0.5
3,396,246	+		LRK53_RS15510	0.16	-1.2
3,396,246	+		LRK53_RS15510	0.16	-0.5
3,396,247	-		LRK53_RS15510	0.16	-0.6
3,396,247	-		LRK53_RS15510	0.16	-0.7
3,396,247	-		LRK53_RS15510	0.16	-0.5
3,396,247	-		LRK53_RS15510	0.16	-1.1
3,396,318	+		LRK53_RS15510	0.21	-0.5
3,396,319	-		LRK53_RS15510	0.21	+1.7
3,396,319	-		LRK53_RS15510	0.21	-0.2
3,396,330	+		LRK53_RS15510	0.21	-0.5
3,396,330	+		LRK53_RS15510	0.21	-2.0
3,396,330	+		LRK53_RS15510	0.21	-0.5
3,396,345	+		LRK53_RS15510	0.22	-0.4
3,396,345	+		LRK53_RS15510	0.22	-1.6
3,396,345	+		LRK53_RS15510	0.22	-1.2
3,396,345	+		LRK53_RS15510	0.22	-0.2
3,396,345	+		LRK53_RS15510	0.22	-0.2
3,396,346	-		LRK53_RS15510	0.22	+0.1
3,396,346	-		LRK53_RS15510	0.22	-0.2
3,396,346	-		LRK53_RS15510	0.22	-0.9
3,396,346	-		LRK53_RS15510	0.22	+0.1
3,396,346	-		LRK53_RS15510	0.22	-1.5
3,396,474	+		LRK53_RS15510	0.31	-0.5
3,396,474	+		LRK53_RS15510	0.31	+0.1
3,396,474	+		LRK53_RS15510	0.31	-0.9
3,396,474	+		LRK53_RS15510	0.31	+1.7
3,396,474	+		LRK53_RS15510	0.31	-0.3
3,396,474	+		LRK53_RS15510	0.31	-0.7
3,396,474	+		LRK53_RS15510	0.31	+0.6
3,396,474	+		LRK53_RS15510	0.31	+0.1
3,396,474	+		LRK53_RS15510	0.31	-1.5
3,396,474	+		LRK53_RS15510	0.31	+1.6
3,396,475	-		LRK53_RS15510	0.31	+1.1
3,396,475	-		LRK53_RS15510	0.31	-0.3
3,396,475	-		LRK53_RS15510	0.31	-1.1
3,396,475	-		LRK53_RS15510	0.31	-0.6
3,396,475	-		LRK53_RS15510	0.31	-1.7
3,396,475	-		LRK53_RS15510	0.31	-2.8
3,396,475	-		LRK53_RS15510	0.31	-1.1
3,396,475	-		LRK53_RS15510	0.31	-1.7
3,396,475	-		LRK53_RS15510	0.31	+1.1
3,396,529	-		LRK53_RS15510	0.34	-0.4
3,396,555	+		LRK53_RS15510	0.36	-0.5
3,396,555	+		LRK53_RS15510	0.36	-1.9
3,396,556	-		LRK53_RS15510	0.36	-0.7
3,396,556	-		LRK53_RS15510	0.36	-1.9
3,396,556	-		LRK53_RS15510	0.36	+0.1
3,396,618	+		LRK53_RS15510	0.40	-1.1
3,396,619	-		LRK53_RS15510	0.40	-1.9
3,396,630	+		LRK53_RS15510	0.41	-0.5
3,396,630	+		LRK53_RS15510	0.41	-0.9
3,396,630	+		LRK53_RS15510	0.41	+1.1
3,396,630	+		LRK53_RS15510	0.41	-1.4
3,396,630	+		LRK53_RS15510	0.41	-0.3
3,396,630	+		LRK53_RS15510	0.41	-1.4
3,396,630	+		LRK53_RS15510	0.41	+0.5
3,396,630	+		LRK53_RS15510	0.41	+0.1
3,396,630	+		LRK53_RS15510	0.41	-1.5
3,396,630	+		LRK53_RS15510	0.41	-1.9
3,396,631	-		LRK53_RS15510	0.41	-0.4
3,396,631	-		LRK53_RS15510	0.41	+0.1
3,396,631	-		LRK53_RS15510	0.41	+1.1
3,396,631	-		LRK53_RS15510	0.41	-1.4
3,396,631	-		LRK53_RS15510	0.41	-1.2
3,396,631	-		LRK53_RS15510	0.41	-2.1
3,396,631	-		LRK53_RS15510	0.41	-1.7
3,396,631	-		LRK53_RS15510	0.41	-1.5
3,396,631	-		LRK53_RS15510	0.41	-2.5
3,396,631	-		LRK53_RS15510	0.41	-0.5
3,396,631	-		LRK53_RS15510	0.41	-0.3
3,396,631	-		LRK53_RS15510	0.41	-1.5
3,396,631	-		LRK53_RS15510	0.41	-0.8
3,396,631	-		LRK53_RS15510	0.41	+0.5
3,396,631	-		LRK53_RS15510	0.41	-1.5
3,396,748	+		LRK53_RS15510	0.48	-0.8
3,396,748	+		LRK53_RS15510	0.48	-1.2
3,396,748	+		LRK53_RS15510	0.48	-1.1
3,396,777	+		LRK53_RS15510	0.50	-1.1
3,396,777	+		LRK53_RS15510	0.50	-0.9
3,396,778	-		LRK53_RS15510	0.50	+1.1
3,396,778	-		LRK53_RS15510	0.50	+1.1
3,396,778	-		LRK53_RS15510	0.50	+0.3
3,396,918	+		LRK53_RS15510	0.59	-1.5
3,396,918	+		LRK53_RS15510	0.59	+0.5
3,396,918	+		LRK53_RS15510	0.59	-1.3
3,396,919	-		LRK53_RS15510	0.59	-0.2
3,396,919	-		LRK53_RS15510	0.59	+0.8
3,396,919	-		LRK53_RS15510	0.59	+1.1
3,396,919	-		LRK53_RS15510	0.59	-0.6
3,396,919	-		LRK53_RS15510	0.59	-0.5
3,396,919	-		LRK53_RS15510	0.59	-1.3
3,396,919	-		LRK53_RS15510	0.59	-1.2
3,396,930	+		LRK53_RS15510	0.60	-0.9
3,396,931	-		LRK53_RS15510	0.60	-1.9
3,396,931	-		LRK53_RS15510	0.60	-1.8
3,396,931	-		LRK53_RS15510	0.60	+0.1
3,396,931	-		LRK53_RS15510	0.60	-1.5
3,396,931	-		LRK53_RS15510	0.60	-0.5
3,396,931	-		LRK53_RS15510	0.60	-0.5
3,397,026	+		LRK53_RS15510	0.66	-2.1
3,397,026	+		LRK53_RS15510	0.66	+1.1
3,397,026	+		LRK53_RS15510	0.66	-0.9
3,397,026	+		LRK53_RS15510	0.66	-1.5
3,397,026	+		LRK53_RS15510	0.66	+0.1
3,397,026	+		LRK53_RS15510	0.66	-0.5
3,397,026	+		LRK53_RS15510	0.66	-0.0
3,397,026	+		LRK53_RS15510	0.66	+0.5
3,397,026	+		LRK53_RS15510	0.66	+0.5
3,397,026	+		LRK53_RS15510	0.66	-0.9
3,397,026	+		LRK53_RS15510	0.66	+0.1
3,397,026	+		LRK53_RS15510	0.66	+0.1
3,397,027	-		LRK53_RS15510	0.66	-0.5
3,397,027	-		LRK53_RS15510	0.66	-2.4
3,397,027	-		LRK53_RS15510	0.66	+0.7
3,397,027	-		LRK53_RS15510	0.66	+0.1
3,397,027	-		LRK53_RS15510	0.66	-1.7
3,397,027	-		LRK53_RS15510	0.66	-1.3
3,397,027	-		LRK53_RS15510	0.66	-0.3
3,397,027	-		LRK53_RS15510	0.66	-1.0
3,397,027	-		LRK53_RS15510	0.66	-0.1
3,397,027	-		LRK53_RS15510	0.66	+0.1
3,397,027	-		LRK53_RS15510	0.66	+1.7
3,397,081	-		LRK53_RS15510	0.70	-0.5
3,397,242	+		LRK53_RS15510	0.80	+0.1
3,397,242	+		LRK53_RS15510	0.80	-0.5
3,397,242	+		LRK53_RS15510	0.80	-1.3
3,397,242	+		LRK53_RS15510	0.80	-0.5
3,397,243	-		LRK53_RS15510	0.80	+0.1
3,397,243	-		LRK53_RS15510	0.80	-0.1
3,397,243	-		LRK53_RS15510	0.80	-0.7
3,397,243	-		LRK53_RS15510	0.80	+0.1
3,397,243	-		LRK53_RS15510	0.80	-1.6
3,397,243	-		LRK53_RS15510	0.80	+2.1
3,397,272	+		LRK53_RS15510	0.82	-0.9
3,397,272	+		LRK53_RS15510	0.82	-0.2
3,397,272	+		LRK53_RS15510	0.82	+0.7
3,397,273	-		LRK53_RS15510	0.82	-1.2
3,397,273	-		LRK53_RS15510	0.82	-1.7
3,397,273	-		LRK53_RS15510	0.82	+0.5
3,397,635	+				-0.9
3,397,688	+				+0.3
3,397,688	+				-1.9
3,397,688	+				-2.1
3,397,688	+				-0.7
3,397,688	+				-2.0
3,397,688	+				-0.9
3,397,688	+				-1.2
3,397,689	-				-0.2
3,397,689	-				+1.1
3,397,689	-				-0.4
3,397,689	-				+0.1
3,397,689	-				-1.8
3,397,692	+				-0.5
3,397,692	+				-0.4
3,397,692	+				-0.9
3,397,692	+				+2.1
3,397,692	+				-0.0
3,397,692	+				-0.5
3,397,692	+				-1.0
3,397,692	+				+0.1
3,397,692	+				-2.1
3,397,692	+				-0.6
3,397,692	+				-0.4
3,397,692	+				-1.1
3,397,692	+				+2.1
3,397,692	+				+1.1
3,397,692	+				-0.9
3,397,692	+				-1.3
3,397,692	+				-1.2
3,397,692	+				-2.6
3,397,692	+				-0.7
3,397,692	+				-0.5
3,397,692	+				-0.4
3,397,692	+				+0.2
3,397,692	+				+2.1
3,397,693	-				-1.2
3,397,693	-				+0.5
3,397,693	-				-0.2
3,397,693	-				+1.4
3,397,693	-				-1.0
3,397,693	-				-1.6
3,397,693	-				+1.1
3,397,693	-				-0.1
3,397,693	-				-0.5
3,397,723	+				-0.9
3,397,723	+				-1.2
3,397,723	+				-0.4
3,397,723	+				-0.5
3,397,724	-				-1.8
3,397,724	-				-0.9
3,397,724	-				+1.1
3,397,727	+				-1.7
3,397,727	+				-0.1
3,397,727	+				-0.2
3,397,727	+				+0.8
3,397,727	+				+1.1
3,397,727	+				-0.2
3,397,727	+				-1.3
3,397,727	+				+0.8
3,397,727	+				+1.1
3,397,727	+				-1.1
3,397,727	+				-0.5
3,397,727	+				-0.9
3,397,727	+				+1.1
3,397,727	+				-0.5
3,397,728	-				-0.1
3,397,728	-				-0.5
3,397,728	-				-1.9
3,397,728	-				-0.4
3,397,728	-				+0.1
3,397,728	-				-0.6
3,397,728	-				-0.9
3,397,728	-				+1.8
3,397,728	-				-0.9
3,397,728	-				-0.2
3,397,728	-				-0.9
3,397,728	-				+0.3
3,397,728	-				-1.7
3,397,728	-				-0.9
3,397,978	+				-0.5
3,397,978	+				-0.7
3,397,978	+				-0.5
3,397,979	-				-1.2
3,397,979	-				-2.2
3,398,182	+		LRK53_RS15515	0.15	-1.1
3,398,182	+		LRK53_RS15515	0.15	+1.1
3,398,182	+		LRK53_RS15515	0.15	-0.7
3,398,182	+		LRK53_RS15515	0.15	-0.8
3,398,182	+		LRK53_RS15515	0.15	-0.6
3,398,182	+		LRK53_RS15515	0.15	-0.3
3,398,182	+		LRK53_RS15515	0.15	+0.1
3,398,182	+		LRK53_RS15515	0.15	+0.1
3,398,182	+		LRK53_RS15515	0.15	-0.5
3,398,182	+		LRK53_RS15515	0.15	-0.5
3,398,182	+		LRK53_RS15515	0.15	-0.0
3,398,182	+		LRK53_RS15515	0.15	+0.1
3,398,182	+		LRK53_RS15515	0.15	+0.5
3,398,182	+		LRK53_RS15515	0.15	-1.5
3,398,182	+		LRK53_RS15515	0.15	+0.8
3,398,182	+		LRK53_RS15515	0.15	-1.3
3,398,182	+		LRK53_RS15515	0.15	+0.2
3,398,182	+		LRK53_RS15515	0.15	+1.5
3,398,183	-		LRK53_RS15515	0.15	-0.5
3,398,183	-		LRK53_RS15515	0.15	-0.7
3,398,183	-		LRK53_RS15515	0.15	-1.2
3,398,183	-		LRK53_RS15515	0.15	+2.7
3,398,183	-		LRK53_RS15515	0.15	-1.2
3,398,183	-		LRK53_RS15515	0.15	-1.8
3,398,183	-		LRK53_RS15515	0.15	-0.8
3,398,183	-		LRK53_RS15515	0.15	+0.1
3,398,183	-		LRK53_RS15515	0.15	-0.9
3,398,183	-		LRK53_RS15515	0.15	-0.2
3,398,183	-		LRK53_RS15515	0.15	-0.9
3,398,183	-		LRK53_RS15515	0.15	+0.5
3,398,183	-		LRK53_RS15515	0.15	-1.1
3,398,183	-		LRK53_RS15515	0.15	-0.4
3,398,183	-		LRK53_RS15515	0.15	-2.2
3,398,183	-		LRK53_RS15515	0.15	-0.5
3,398,183	-		LRK53_RS15515	0.15	-0.9
3,398,183	-		LRK53_RS15515	0.15	-1.0
3,398,183	-		LRK53_RS15515	0.15	-0.7
3,398,183	-		LRK53_RS15515	0.15	-0.2
3,398,183	-		LRK53_RS15515	0.15	-0.5
3,398,183	-		LRK53_RS15515	0.15	-1.2
3,398,207	-		LRK53_RS15515	0.16	+1.8
3,398,311	+		LRK53_RS15515	0.21	-1.2
3,398,311	+		LRK53_RS15515	0.21	-1.9
3,398,311	+		LRK53_RS15515	0.21	-0.5
3,398,311	+		LRK53_RS15515	0.21	+1.4
3,398,312	-		LRK53_RS15515	0.21	+0.1
3,398,425	+		LRK53_RS15515	0.26	-1.2
3,398,425	+		LRK53_RS15515	0.26	-1.7
3,398,425	+		LRK53_RS15515	0.26	+0.8
3,398,425	+		LRK53_RS15515	0.26	-1.2
3,398,425	+		LRK53_RS15515	0.26	-0.9
3,398,425	+		LRK53_RS15515	0.26	-1.2
3,398,425	+		LRK53_RS15515	0.26	-1.2
3,398,426	-		LRK53_RS15515	0.26	-1.0
3,398,426	-		LRK53_RS15515	0.26	-0.7
3,398,426	-		LRK53_RS15515	0.26	+0.1
3,398,426	-		LRK53_RS15515	0.26	-0.2
3,398,426	-		LRK53_RS15515	0.26	+0.1
3,398,426	-		LRK53_RS15515	0.26	+1.1
3,398,426	-		LRK53_RS15515	0.26	-1.1
3,398,426	-		LRK53_RS15515	0.26	-2.5
3,398,426	-		LRK53_RS15515	0.26	-0.5
3,398,426	-		LRK53_RS15515	0.26	+0.1
3,398,426	-		LRK53_RS15515	0.26	+0.1
3,398,426	-		LRK53_RS15515	0.26	-1.5
3,398,426	-		LRK53_RS15515	0.26	-0.9
3,398,442	+		LRK53_RS15515	0.27	-1.8
3,398,464	+		LRK53_RS15515	0.28	+0.5
3,398,464	+		LRK53_RS15515	0.28	+0.1
3,398,464	+		LRK53_RS15515	0.28	+0.1
3,398,464	+		LRK53_RS15515	0.28	+2.1
3,398,465	-		LRK53_RS15515	0.28	-1.9
3,398,465	-		LRK53_RS15515	0.28	+1.1
3,398,492	-		LRK53_RS15515	0.29	-0.9
3,398,533	+		LRK53_RS15515	0.31	-1.5
3,398,533	+		LRK53_RS15515	0.31	-1.7
3,398,534	-		LRK53_RS15515	0.31	-2.1
3,398,534	-		LRK53_RS15515	0.31	-0.1