Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15495

Experiment: defined media with L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with L-Serine
3,388,874	+		LRK53_RS15490	0.46	-0.5
3,388,952	+		LRK53_RS15490	0.51	-1.5
3,389,030	+		LRK53_RS15490	0.56	-1.4
3,389,030	+		LRK53_RS15490	0.56	+0.1
3,389,031	-		LRK53_RS15490	0.56	+0.1
3,389,031	-		LRK53_RS15490	0.56	+0.5
3,389,297	+		LRK53_RS15490	0.73	+0.1
3,389,297	+		LRK53_RS15490	0.73	-0.9
3,389,297	+		LRK53_RS15490	0.73	-1.3
3,389,297	+		LRK53_RS15490	0.73	-0.9
3,389,297	+		LRK53_RS15490	0.73	-0.6
3,389,297	+		LRK53_RS15490	0.73	+0.8
3,389,297	+		LRK53_RS15490	0.73	-0.0
3,389,297	+		LRK53_RS15490	0.73	-1.8
3,389,297	+		LRK53_RS15490	0.73	-0.1
3,389,298	-		LRK53_RS15490	0.73	+2.1
3,389,298	-		LRK53_RS15490	0.73	-0.1
3,389,298	-		LRK53_RS15490	0.73	+0.1
3,389,298	-		LRK53_RS15490	0.73	+1.1
3,389,298	-		LRK53_RS15490	0.73	+1.1
3,389,298	-		LRK53_RS15490	0.73	-0.9
3,389,298	-		LRK53_RS15490	0.73	+1.1
3,389,298	-		LRK53_RS15490	0.73	-2.3
3,389,298	-		LRK53_RS15490	0.73	-1.5
3,389,298	-		LRK53_RS15490	0.73	+0.6
3,389,298	-		LRK53_RS15490	0.73	-0.8
3,389,321	+		LRK53_RS15490	0.75	-1.3
3,389,354	+		LRK53_RS15490	0.77	-0.6
3,389,354	+		LRK53_RS15490	0.77	+2.1
3,389,354	+		LRK53_RS15490	0.77	-0.4
3,389,354	+		LRK53_RS15490	0.77	-2.3
3,389,354	+		LRK53_RS15490	0.77	-0.9
3,389,354	+		LRK53_RS15490	0.77	-1.5
3,389,354	+		LRK53_RS15490	0.77	-0.2
3,389,354	+		LRK53_RS15490	0.77	-0.9
3,389,354	+		LRK53_RS15490	0.77	-1.8
3,389,354	+		LRK53_RS15490	0.77	+1.1
3,389,354	+		LRK53_RS15490	0.77	+1.6
3,389,354	+		LRK53_RS15490	0.77	-1.8
3,389,354	+		LRK53_RS15490	0.77	-0.7
3,389,354	+		LRK53_RS15490	0.77	+1.6
3,389,354	+		LRK53_RS15490	0.77	-1.1
3,389,354	+		LRK53_RS15490	0.77	-2.5
3,389,354	+		LRK53_RS15490	0.77	-0.9
3,389,354	+		LRK53_RS15490	0.77	+1.1
3,389,354	+		LRK53_RS15490	0.77	-0.9
3,389,355	-		LRK53_RS15490	0.77	-1.5
3,389,355	-		LRK53_RS15490	0.77	-1.8
3,389,355	-		LRK53_RS15490	0.77	-0.7
3,389,355	-		LRK53_RS15490	0.77	+0.1
3,389,355	-		LRK53_RS15490	0.77	-1.8
3,389,355	-		LRK53_RS15490	0.77	-1.2
3,389,377	+		LRK53_RS15490	0.78	-0.5
3,389,830	+				+0.1
3,389,831	-				+3.4
3,389,854	+				-0.8
3,389,854	+				-2.1
3,389,855	-				-1.3
3,389,855	-				-0.4
3,389,855	-				-0.5
3,389,855	-				-0.7
3,389,911	+		LRK53_RS15495	0.13	-1.5
3,389,912	-		LRK53_RS15495	0.13	+0.5
3,389,912	-		LRK53_RS15495	0.13	-0.5
3,389,971	+		LRK53_RS15495	0.17	-0.3
3,389,971	+		LRK53_RS15495	0.17	+1.1
3,389,971	+		LRK53_RS15495	0.17	+0.6
3,389,971	+		LRK53_RS15495	0.17	+1.5
3,389,972	-		LRK53_RS15495	0.17	+0.5
3,389,972	-		LRK53_RS15495	0.17	-0.5
3,389,972	-		LRK53_RS15495	0.17	+0.5
3,389,972	-		LRK53_RS15495	0.17	-1.5
3,389,972	-		LRK53_RS15495	0.17	-0.6
3,389,980	+		LRK53_RS15495	0.17	-0.5
3,389,995	+		LRK53_RS15495	0.18	+1.1
3,389,995	+		LRK53_RS15495	0.18	+1.1
3,389,995	+		LRK53_RS15495	0.18	-0.7
3,389,995	+		LRK53_RS15495	0.18	+0.1
3,389,995	+		LRK53_RS15495	0.18	-1.1
3,389,995	+		LRK53_RS15495	0.18	-1.3
3,389,995	+		LRK53_RS15495	0.18	-0.3
3,389,995	+		LRK53_RS15495	0.18	+0.1
3,389,995	+		LRK53_RS15495	0.18	-0.5
3,389,995	+		LRK53_RS15495	0.18	-0.9
3,389,996	-		LRK53_RS15495	0.18	-0.3
3,389,996	-		LRK53_RS15495	0.18	-0.5
3,389,996	-		LRK53_RS15495	0.18	-0.5
3,389,996	-		LRK53_RS15495	0.18	-0.9
3,389,996	-		LRK53_RS15495	0.18	-0.5
3,389,996	-		LRK53_RS15495	0.18	+0.3
3,389,998	+		LRK53_RS15495	0.19	-0.2
3,389,998	+		LRK53_RS15495	0.19	+0.1
3,389,999	-		LRK53_RS15495	0.19	-0.3
3,389,999	-		LRK53_RS15495	0.19	+2.1
3,390,016	+		LRK53_RS15495	0.20	+2.1
3,390,017	-		LRK53_RS15495	0.20	-1.2
3,390,077	+		LRK53_RS15495	0.24	+1.1
3,390,077	+		LRK53_RS15495	0.24	-0.0
3,390,077	+		LRK53_RS15495	0.24	+0.3
3,390,077	+		LRK53_RS15495	0.24	+2.1
3,390,077	+		LRK53_RS15495	0.24	-0.9
3,390,077	+		LRK53_RS15495	0.24	-0.7
3,390,078	-		LRK53_RS15495	0.24	-1.7
3,390,078	-		LRK53_RS15495	0.24	-1.5
3,390,078	-		LRK53_RS15495	0.24	+0.1
3,390,166	+		LRK53_RS15495	0.29	-0.4
3,390,166	+		LRK53_RS15495	0.29	-1.9
3,390,166	+		LRK53_RS15495	0.29	-0.5
3,390,166	+		LRK53_RS15495	0.29	+1.1
3,390,167	-		LRK53_RS15495	0.29	-0.7
3,390,167	-		LRK53_RS15495	0.29	-0.2
3,390,167	-		LRK53_RS15495	0.29	+0.2
3,390,167	-		LRK53_RS15495	0.29	-0.6
3,390,247	+		LRK53_RS15495	0.35	-0.9
3,390,247	+		LRK53_RS15495	0.35	-0.5
3,390,247	+		LRK53_RS15495	0.35	-1.9
3,390,247	+		LRK53_RS15495	0.35	-1.5
3,390,247	+		LRK53_RS15495	0.35	+0.3
3,390,248	-		LRK53_RS15495	0.35	+0.5
3,390,248	-		LRK53_RS15495	0.35	-0.7
3,390,248	-		LRK53_RS15495	0.35	+1.1
3,390,248	-		LRK53_RS15495	0.35	-1.5
3,390,248	-		LRK53_RS15495	0.35	-0.4
3,390,248	-		LRK53_RS15495	0.35	+1.1
3,390,250	+		LRK53_RS15495	0.35	-0.8
3,390,250	+		LRK53_RS15495	0.35	-0.9
3,390,250	+		LRK53_RS15495	0.35	+0.1
3,390,250	+		LRK53_RS15495	0.35	+0.1
3,390,250	+		LRK53_RS15495	0.35	-0.5
3,390,251	-		LRK53_RS15495	0.35	-1.3
3,390,251	-		LRK53_RS15495	0.35	-0.5
3,390,290	-		LRK53_RS15495	0.37	-0.5
3,390,290	-		LRK53_RS15495	0.37	+0.1
3,390,335	-		LRK53_RS15495	0.40	-2.1
3,390,388	+		LRK53_RS15495	0.44	-0.3
3,390,388	+		LRK53_RS15495	0.44	-0.9
3,390,388	+		LRK53_RS15495	0.44	+0.9
3,390,388	+		LRK53_RS15495	0.44	-1.3
3,390,388	+		LRK53_RS15495	0.44	-1.1
3,390,388	+		LRK53_RS15495	0.44	+0.6
3,390,388	+		LRK53_RS15495	0.44	+0.6
3,390,388	+		LRK53_RS15495	0.44	-0.3
3,390,388	+		LRK53_RS15495	0.44	+0.1
3,390,388	+		LRK53_RS15495	0.44	+1.1
3,390,388	+		LRK53_RS15495	0.44	+0.1
3,390,389	-		LRK53_RS15495	0.44	-0.7
3,390,389	-		LRK53_RS15495	0.44	-1.5
3,390,389	-		LRK53_RS15495	0.44	-0.3
3,390,389	-		LRK53_RS15495	0.44	+2.1
3,390,389	-		LRK53_RS15495	0.44	-0.3
3,390,389	-		LRK53_RS15495	0.44	+0.6
3,390,389	-		LRK53_RS15495	0.44	-0.1
3,390,389	-		LRK53_RS15495	0.44	-0.7
3,390,389	-		LRK53_RS15495	0.44	-1.5
3,390,389	-		LRK53_RS15495	0.44	-0.5
3,390,389	-		LRK53_RS15495	0.44	-1.5
3,390,389	-		LRK53_RS15495	0.44	-0.7
3,390,389	-		LRK53_RS15495	0.44	+0.1
3,390,389	-		LRK53_RS15495	0.44	-1.5
3,390,389	-		LRK53_RS15495	0.44	+0.1
3,390,391	+		LRK53_RS15495	0.44	-0.7
3,390,391	+		LRK53_RS15495	0.44	+0.6
3,390,391	+		LRK53_RS15495	0.44	-1.7
3,390,392	-		LRK53_RS15495	0.44	-1.3
3,390,470	+		LRK53_RS15495	0.49	+1.1
3,390,470	+		LRK53_RS15495	0.49	+0.1
3,390,470	+		LRK53_RS15495	0.49	-0.9
3,390,471	-		LRK53_RS15495	0.49	-0.8
3,390,471	-		LRK53_RS15495	0.49	-0.5
3,390,471	-		LRK53_RS15495	0.49	+0.6
3,390,471	-		LRK53_RS15495	0.49	+0.1
3,390,493	+		LRK53_RS15495	0.50	+0.3
3,390,493	+		LRK53_RS15495	0.50	-0.3
3,390,494	-		LRK53_RS15495	0.50	-0.8
3,390,494	-		LRK53_RS15495	0.50	+0.6
3,390,494	-		LRK53_RS15495	0.50	+0.1
3,390,494	-		LRK53_RS15495	0.50	-0.5
3,390,541	+		LRK53_RS15495	0.53	-1.0
3,390,809	-		LRK53_RS15495	0.71	-1.7
3,390,812	-		LRK53_RS15495	0.71	+0.5
3,390,812	-		LRK53_RS15495	0.71	-1.5
3,390,812	-		LRK53_RS15495	0.71	+0.1
3,390,988	+		LRK53_RS15495	0.82	-0.5
3,390,989	-		LRK53_RS15495	0.82	+2.6
3,390,989	-		LRK53_RS15495	0.82	-1.5
3,390,989	-		LRK53_RS15495	0.82	+0.3
3,390,991	+		LRK53_RS15495	0.82	-0.9
3,390,991	+		LRK53_RS15495	0.82	-0.5
3,390,991	+		LRK53_RS15495	0.82	+1.1
3,390,991	+		LRK53_RS15495	0.82	+1.1
3,390,991	+		LRK53_RS15495	0.82	+1.6
3,390,991	+		LRK53_RS15495	0.82	-2.4
3,390,991	+		LRK53_RS15495	0.82	-2.3
3,390,991	+		LRK53_RS15495	0.82	-0.1
3,390,991	+		LRK53_RS15495	0.82	-0.9
3,390,991	+		LRK53_RS15495	0.82	+2.1
3,390,992	-		LRK53_RS15495	0.82	-0.8
3,390,992	-		LRK53_RS15495	0.82	-0.3
3,390,992	-		LRK53_RS15495	0.82	+0.5
3,390,992	-		LRK53_RS15495	0.82	-0.7
3,390,992	-		LRK53_RS15495	0.82	-0.5
3,390,992	-		LRK53_RS15495	0.82	-1.5
3,390,992	-		LRK53_RS15495	0.82	-1.1
3,390,992	-		LRK53_RS15495	0.82	+1.6
3,391,240	+				-1.4
3,391,240	+				-1.2
3,391,240	+				-0.5
3,391,240	+				+0.1
3,391,240	+				-0.7
3,391,241	-				-0.6
3,391,241	-				+1.1
3,391,758	+		LRK53_RS15500	0.20	-0.3
3,391,867	+		LRK53_RS15500	0.25	-1.2
3,391,868	-		LRK53_RS15500	0.25	-1.3
3,391,868	-		LRK53_RS15500	0.25	-0.5
3,391,974	+		LRK53_RS15500	0.29	+1.1
3,391,974	+		LRK53_RS15500	0.29	-1.3
3,391,974	+		LRK53_RS15500	0.29	+0.1
3,391,975	-		LRK53_RS15500	0.29	-0.2
3,391,975	-		LRK53_RS15500	0.29	+1.5
3,391,977	+		LRK53_RS15500	0.29	+1.1
3,391,977	+		LRK53_RS15500	0.29	-1.3
3,391,977	+		LRK53_RS15500	0.29	-1.5
3,391,977	+		LRK53_RS15500	0.29	+2.1
3,391,977	+		LRK53_RS15500	0.29	+1.1
3,391,977	+		LRK53_RS15500	0.29	+0.1
3,391,977	+		LRK53_RS15500	0.29	-0.5
3,391,977	+		LRK53_RS15500	0.29	+1.1
3,391,977	+		LRK53_RS15500	0.29	-2.1
3,391,977	+		LRK53_RS15500	0.29	-0.9
3,391,977	+		LRK53_RS15500	0.29	-1.5
3,391,977	+		LRK53_RS15500	0.29	+1.1
3,391,977	+		LRK53_RS15500	0.29	-0.9
3,391,977	+		LRK53_RS15500	0.29	-0.5
3,391,977	+		LRK53_RS15500	0.29	-0.5
3,391,978	-		LRK53_RS15500	0.29	-1.3
3,391,978	-		LRK53_RS15500	0.29	+0.1
3,391,978	-		LRK53_RS15500	0.29	-0.5
3,391,978	-		LRK53_RS15500	0.29	-0.7
3,391,978	-		LRK53_RS15500	0.29	+0.1
3,391,978	-		LRK53_RS15500	0.29	-0.5
3,391,978	-		LRK53_RS15500	0.29	-1.0
3,391,978	-		LRK53_RS15500	0.29	-1.5
3,391,978	-		LRK53_RS15500	0.29	-0.5
3,392,124	+		LRK53_RS15500	0.35	-1.1
3,392,124	+		LRK53_RS15500	0.35	-0.4
3,392,124	+		LRK53_RS15500	0.35	-2.5
3,392,125	-		LRK53_RS15500	0.35	-0.9