Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13955

Experiment: defined media with L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	defined media with L-Serine
3,070,822	+		LRK53_RS13945	0.22	-1.2
3,070,822	+		LRK53_RS13945	0.22	-1.0
3,070,822	+		LRK53_RS13945	0.22	+1.5
3,070,822	+		LRK53_RS13945	0.22	+0.5
3,070,822	+		LRK53_RS13945	0.22	+0.4
3,070,822	+		LRK53_RS13945	0.22	-0.7
3,070,823	-		LRK53_RS13945	0.22	+0.4
3,070,823	-		LRK53_RS13945	0.22	-0.6
3,070,855	+		LRK53_RS13945	0.29	-0.6
3,070,855	+		LRK53_RS13945	0.29	-0.6
3,070,855	+		LRK53_RS13945	0.29	+1.4
3,070,855	+		LRK53_RS13945	0.29	-0.2
3,070,855	+		LRK53_RS13945	0.29	-1.1
3,070,855	+		LRK53_RS13945	0.29	-1.6
3,070,855	+		LRK53_RS13945	0.29	+0.4
3,070,855	+		LRK53_RS13945	0.29	-1.1
3,070,855	+		LRK53_RS13945	0.29	-1.1
3,070,855	+		LRK53_RS13945	0.29	-0.1
3,070,855	+		LRK53_RS13945	0.29	-0.6
3,070,855	+		LRK53_RS13945	0.29	-0.6
3,070,855	+		LRK53_RS13945	0.29	-0.6
3,070,855	+		LRK53_RS13945	0.29	+0.1
3,070,855	+		LRK53_RS13945	0.29	-0.6
3,070,855	+		LRK53_RS13945	0.29	+0.9
3,070,855	+		LRK53_RS13945	0.29	-1.6
3,070,855	+		LRK53_RS13945	0.29	-0.1
3,070,855	+		LRK53_RS13945	0.29	-1.1
3,070,855	+		LRK53_RS13945	0.29	-1.1
3,070,855	+		LRK53_RS13945	0.29	-1.5
3,070,856	-		LRK53_RS13945	0.29	-0.3
3,070,856	-		LRK53_RS13945	0.29	+1.5
3,070,856	-		LRK53_RS13945	0.29	+2.9
3,070,856	-		LRK53_RS13945	0.29	-0.8
3,070,856	-		LRK53_RS13945	0.29	-0.6
3,070,856	-		LRK53_RS13945	0.29	+0.9
3,070,856	-		LRK53_RS13945	0.29	-1.7
3,070,856	-		LRK53_RS13945	0.29	+1.4
3,070,856	-		LRK53_RS13945	0.29	+0.4
3,070,856	-		LRK53_RS13945	0.29	-0.8
3,070,856	-		LRK53_RS13945	0.29	-0.6
3,070,856	-		LRK53_RS13945	0.29	-0.3
3,070,856	-		LRK53_RS13945	0.29	-0.9
3,070,856	-		LRK53_RS13945	0.29	-1.6
3,070,856	-		LRK53_RS13945	0.29	-2.1
3,070,856	-		LRK53_RS13945	0.29	-0.1
3,070,856	-		LRK53_RS13945	0.29	-1.6
3,070,856	-		LRK53_RS13945	0.29	-0.6
3,070,856	-		LRK53_RS13945	0.29	+0.4
3,070,856	-		LRK53_RS13945	0.29	+0.9
3,070,856	-		LRK53_RS13945	0.29	-1.1
3,070,856	-		LRK53_RS13945	0.29	-1.6
3,070,856	-		LRK53_RS13945	0.29	-1.4
3,070,856	-		LRK53_RS13945	0.29	-0.9
3,070,861	+		LRK53_RS13945	0.30	-1.4
3,070,861	+		LRK53_RS13945	0.30	-0.6
3,070,861	+		LRK53_RS13945	0.30	-1.9
3,070,862	-		LRK53_RS13945	0.31	-0.4
3,070,862	-		LRK53_RS13945	0.31	+0.2
3,070,862	-		LRK53_RS13945	0.31	-1.1
3,070,862	-		LRK53_RS13945	0.31	-0.1
3,070,862	-		LRK53_RS13945	0.31	-1.4
3,070,862	-		LRK53_RS13945	0.31	-1.1
3,070,930	+		LRK53_RS13945	0.45	-0.6
3,070,931	-		LRK53_RS13945	0.45	-2.4
3,070,931	-		LRK53_RS13945	0.45	-0.1
3,070,968	+		LRK53_RS13945	0.53	-1.2
3,070,968	+		LRK53_RS13945	0.53	+2.5
3,070,968	+		LRK53_RS13945	0.53	-0.1
3,070,968	+		LRK53_RS13945	0.53	-1.1
3,070,968	+		LRK53_RS13945	0.53	-0.6
3,070,968	+		LRK53_RS13945	0.53	-2.4
3,070,968	+		LRK53_RS13945	0.53	-0.6
3,070,968	+		LRK53_RS13945	0.53	+1.9
3,070,969	-		LRK53_RS13945	0.53	+1.9
3,070,969	-		LRK53_RS13945	0.53	-1.1
3,070,969	-		LRK53_RS13945	0.53	-1.2
3,070,969	-		LRK53_RS13945	0.53	-0.9
3,070,969	-		LRK53_RS13945	0.53	-0.1
3,070,969	-		LRK53_RS13945	0.53	-1.4
3,071,282	+				-1.3
3,071,282	+				-0.6
3,071,282	+				+0.4
3,071,282	+				+0.2
3,071,282	+				+0.9
3,071,282	+				-0.6
3,071,282	+				-1.4
3,071,282	+				-0.1
3,071,282	+				+0.4
3,071,282	+				-0.9
3,071,282	+				-1.4
3,071,282	+				-1.5
3,071,282	+				-0.1
3,071,282	+				+1.9
3,071,282	+				-0.1
3,071,282	+				-2.8
3,071,282	+				-0.5
3,071,282	+				+0.3
3,071,282	+				+0.1
3,071,283	-				-0.6
3,071,283	-				-1.1
3,071,283	-				-0.9
3,071,283	-				-1.9
3,071,283	-				-1.9
3,071,283	-				-1.1
3,071,283	-				-1.4
3,071,283	-				-0.6
3,071,283	-				-0.5
3,071,283	-				-0.1
3,071,283	-				-0.6
3,071,283	-				+0.1
3,071,564	+		LRK53_RS13950	0.65	-1.1
3,071,815	+		LRK53_RS13955	0.10	-1.5
3,071,815	+		LRK53_RS13955	0.10	+0.9
3,071,815	+		LRK53_RS13955	0.10	-1.1
3,071,815	+		LRK53_RS13955	0.10	-1.4
3,071,815	+		LRK53_RS13955	0.10	-1.6
3,071,815	+		LRK53_RS13955	0.10	-1.7
3,071,815	+		LRK53_RS13955	0.10	-1.1
3,071,816	-		LRK53_RS13955	0.11	-0.1
3,071,816	-		LRK53_RS13955	0.11	+0.9
3,071,816	-		LRK53_RS13955	0.11	-0.4
3,071,816	-		LRK53_RS13955	0.11	+0.1
3,071,959	+		LRK53_RS13955	0.26	-0.9
3,071,959	+		LRK53_RS13955	0.26	-1.9
3,071,959	+		LRK53_RS13955	0.26	-1.9
3,071,960	-		LRK53_RS13955	0.27	-0.2
3,071,960	-		LRK53_RS13955	0.27	-2.5
3,071,960	-		LRK53_RS13955	0.27	-1.0
3,071,960	-		LRK53_RS13955	0.27	-1.4
3,072,124	+		LRK53_RS13955	0.45	-1.4
3,072,124	+		LRK53_RS13955	0.45	-2.1
3,072,124	+		LRK53_RS13955	0.45	-0.5
3,072,124	+		LRK53_RS13955	0.45	+0.4
3,072,124	+		LRK53_RS13955	0.45	-1.1
3,072,125	-		LRK53_RS13955	0.45	-1.1
3,072,125	-		LRK53_RS13955	0.45	-1.4
3,072,477	+		LRK53_RS13955	0.84	-2.1
3,072,574	+				-0.6
3,072,574	+				-0.3
3,072,574	+				-0.4
3,072,575	-				+1.5
3,072,575	-				-0.7
3,072,575	-				+1.2
3,072,575	-				-0.9
3,072,639	+				+0.6
3,072,639	+				+0.1
3,072,639	+				-0.6
3,072,639	+				-1.3
3,072,639	+				-0.1
3,072,639	+				-0.8
3,072,639	+				+0.4
3,072,639	+				-1.2
3,072,639	+				-0.3
3,072,639	+				-1.2
3,072,639	+				-1.3
3,072,640	-				-1.6
3,072,640	-				-1.3
3,072,640	-				+0.2
3,072,640	-				-1.1
3,072,640	-				-0.4
3,072,640	-				-0.6
3,072,640	-				+1.6
3,072,640	-				-0.1
3,072,640	-				-1.0
3,072,640	-				-0.5
3,072,640	-				-1.1
3,072,640	-				-1.1
3,072,640	-				-1.1
3,072,640	-				+0.5
3,072,640	-				+0.9
3,072,640	-				-1.6
3,072,640	-				-1.5
3,072,644	+				-2.5
3,072,644	+				-0.4
3,072,645	-				-0.1
3,072,662	+				-1.6
3,072,662	+				-0.4
3,072,662	+				-0.1
3,072,662	+				-0.2
3,072,662	+				-0.6
3,072,662	+				-0.5
3,072,663	-				-0.1
3,072,663	-				-1.2
3,072,683	+				-0.5
3,072,683	+				+0.1
3,072,684	-				-1.1
3,072,900	-		LRK53_RS13960	0.31	-2.1
3,072,949	+		LRK53_RS13960	0.40	-1.3
3,072,949	+		LRK53_RS13960	0.40	-0.8
3,072,949	+		LRK53_RS13960	0.40	+0.8
3,072,949	+		LRK53_RS13960	0.40	+0.9
3,072,949	+		LRK53_RS13960	0.40	-0.2
3,072,949	+		LRK53_RS13960	0.40	-1.4
3,073,132	+		LRK53_RS13960	0.70	-0.1
3,073,132	+		LRK53_RS13960	0.70	-1.4
3,073,132	+		LRK53_RS13960	0.70	-1.1
3,073,132	+		LRK53_RS13960	0.70	+0.2
3,073,132	+		LRK53_RS13960	0.70	-0.4
3,073,133	-		LRK53_RS13960	0.71	-1.4
3,073,133	-		LRK53_RS13960	0.71	-1.7
3,073,133	-		LRK53_RS13960	0.71	-1.8
3,073,466	+		LRK53_RS13965	0.21	-0.8
3,073,466	+		LRK53_RS13965	0.21	-0.5
3,073,467	-		LRK53_RS13965	0.21	-0.8
3,073,467	-		LRK53_RS13965	0.21	-0.6
3,073,467	-		LRK53_RS13965	0.21	+0.2
3,073,467	-		LRK53_RS13965	0.21	-1.6
3,073,599	-		LRK53_RS13965	0.42	-1.1